Pistacia vera (pistachio): 116115105
Help
Entry
116115105 CDS
T07386
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
116115105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvy03000
]
116115105
Transcription factors [BR:
pvy03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
116115105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
116115105
NCBI-ProteinID:
XP_031257116
LinkDB
All DBs
Position
Unknown
AA seq
332 aa
AA seq
DB search
MVDCLSDFFDEPELAEDDLFAIFESLDSVTDFPPVTLLDETVVISSYQQEKGARLVSQKS
TSSSILQESETELETSPKSKRQKINNAATNSSDEALPDGQQRMSHITVERNRRKQMNEHL
SVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQRKVYSEVLSPRIVSSPR
PLPLSPRKPPLSPRLNLPISPRTPQPGSPYRPRLQQGYLSPTKPSSVEPSPCSSSTSSID
SINELVANSKSAIADVEVKFSGPNVLLKTVSPRIPGQAGKIIAALEDLSLEILNVNINTV
DETMLNSFTIKIGIECQLSAEELAQQIQQTFC
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggttgattgtttgtctgatttttttgacgaacctgagttggccgaggatgatctcttc
gctatttttgagagtttagatagcgtcacggacttccctccagttacgctgttggatgaa
actgttgtaataagctcctatcaacaagaaaagggcgcaagattggtgtcacagaagtct
acttcttcaagtattctgcaagagtctgaaactgagcttgaaacttcacccaagagcaag
aggcagaagattaataatgctgccaccaattcctctgatgaagcgctcccggatggacaa
caaaggatgtctcacataacggtggagcgtaaccggagaaagcaaatgaacgagcacctc
tcagtgttgcgatctcttatgccttgcttctatgtcaaaagaggagatcaagcttctata
attggaggtgttgttgattacatcaatgagttgcagcaagttcttcaatcacttgaagcc
aagaagcaaagaaaagtttacagtgaggttttaagccctagaatagtttcaagtccaaga
cctttaccacttagccctagaaaaccgccgctcagtccgagattgaacctacctataagt
ccgagaactccacagccgggaagcccttaccggccgaggttgcagcaaggttacctatct
ccaactaagccgagttccgttgaaccatccccttgctcttcaagtacttcctccattgac
agtattaatgagctcgttgccaattcaaagtctgccattgctgatgtggaggtgaagttt
tctggcccaaacgttcttttaaagacggtttccccaagaattcctggccaggctgggaaa
ataatagccgctcttgaagacctctccctggagattctcaatgtgaacatcaacactgtt
gatgaaaccatgcttaactccttcacaatcaagattggaattgaatgccaactgagtgcg
gaggagcttgctcaacaaattcaacagacattctgctaa
DBGET
integrated database retrieval system