Pistacia vera (pistachio): 116117481
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Entry
116117481 CDS
T07386
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116117481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvy03041
]
116117481
03036 Chromosome and associated proteins [BR:
pvy03036
]
116117481
Spliceosome [BR:
pvy03041
]
Complex B
Other components
Prp19-related factors
116117481
Complex C
116117481
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
116117481
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
TPR_14
HAT
Suf
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_2
HAT_Syf1_M
TPR_17
Mad3_BUB1_I
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
116117481
NCBI-ProteinID:
XP_031259364
LinkDB
All DBs
Position
Unknown
AA seq
704 aa
AA seq
DB search
MASKDADPSLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQ
KITDSTELADYRLRKRKEFEDLIRRVRWNISVWIKYAQWEESQKDFERARSVWERALEVD
YRNHTLWLKYAEVEMKNKFINRARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQI
FERWMNWMPDQQGWLSYIKFELRYNEVDRARQIFERFVQCHPKVTAWIRYAKFEMKNGEV
DRSRNVYERAVEKLADDEEAELLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLY
RKFVAFEKQYGDKEGIEDAIVGKRRFQYEDEVRKNPLNYDTWFDYIRLEESVGNKGRIRE
VYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAEDMERTRDVYTECLKLIPHKKFSF
AKIWLLAALFEIRQLNLNGARKILGNAIGQAPKDKIFKKYIEIELQLGNMDRCRKLYERY
LEWSPENCYAWSKFAELERSLDETERARAIFELAIAQPALDMPELLWKAYIDFEISEGEF
DRTRALYERLLDRTKHLKVWISYAKFEASAMKEDVEGSELAEDDAQEDLLEQKKQCIQNA
RRVFEKAVNYFRTSAPELKEERAMLLEEWLNMESSFGELGDVSLVQVKLPKKLKKRRQIV
IDDGLSAGYEEYIDYLFPEESQTTNLKILEAAYRWKKQKIVSDD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggcatctaaagatgcggatccttctctgggatacctcacgcgcaaggacacagaggtg
aaactaccacgtcctactcgagtcaagaacaaaaccccagctccgatacaaatcactgct
gaacaaattttacgtgaagctcgggaacgtcaagaggctgaaatccggccacctaaacag
aaaatcaccgactctaccgagcttgctgactatcgtcttcgcaagaggaaggaatttgag
gatttaattcgtagagtgcgctggaacattagtgtgtggattaagtatgcgcaatgggag
gagtctcagaaagattttgagcgtgctcgaagcgtgtgggaacgtgcgttggaagttgat
taccggaaccacactctttggttgaagtatgctgaggtagagatgaagaacaagttcatt
aacagggcacggaatgtttgggaccgtgcagtcacattgttaccacgtgtggatcaacta
tggtataaatatattcacatggaagaaatgcttgggaatgttgctggagctaggcagatt
tttgaaaggtggatgaattggatgcctgatcagcaagggtggttgtcatatatcaaattt
gagcttcggtataatgaagttgaccgtgctaggcagattttcgaacggtttgttcagtgc
cacccaaaagttacagcatggattcgttatgccaagtttgagatgaaaaatggagaagtt
gatcgatcaaggaatgtttatgaacgtgcagtggagaaattggcagatgacgaagaggct
gagttgttgtttgttgcatttgcagagtttgaggagagatgtaaggagacagagcgtgct
agatgcatttataagtttgcattggatcatataccaaagggcagggctgaagacttatat
agaaagtttgtggcctttgagaaacagtatggagataaggaagggattgaggatgctatt
gtgggaaagaggaggtttcaatatgaggatgaagtgagaaagaatccactgaattatgac
acatggtttgactacattaggttagaagagagtgtaggaaataagggaaggattagggag
gtttatgagcgcgcgattgctaatgtgccaccagctgaggagaagagatattggcaaaga
tatatatacttgtggattaattatgcactgtatgaggaactggatgcggaagatatggaa
cggacaagagatgtgtataccgagtgcctgaagctaattcctcataagaagttttccttt
gcaaagatctggctcttggctgccctgtttgaaatacggcaattaaatctcaatggtgcc
cggaaaattttagggaatgcaattggacaagctcctaaggacaagatatttaaaaaatac
attgaaatagaattgcagcttggtaatatggaccgatgccgaaagctttatgaaaggtac
ttggaatggtcaccagagaactgctatgcttggagcaaatttgcagaactggagagatct
ttggatgaaacagagcgagctagggctatttttgagcttgcaattgcccagccggctttg
gatatgcctgagttgttgtggaaggcatatatcgactttgagatatcagaaggtgagttt
gacagaacgagagctctttatgagagactcttggatcgtacaaaacacttgaaggtgtgg
attagttatgcaaaatttgaggcttctgctatgaaggaggatgttgagggctcagagttg
gcagaagatgatgcccaggaagatttacttgaacaaaagaagcaatgcattcagaatgca
aggagagtctttgagaaggcagttaactattttagaacgtcagcccctgaattaaaggaa
gaaagggctatgttgttggaagagtggttgaacatggagagtagctttggtgagcttggt
gatgttagcttagtccaggttaagctaccaaagaaacttaagaagagaaggcaaatagtc
attgatgatgggctgtcagctgggtatgaagagtacatcgactatctgttccctgaggaa
tcgcagactacaaatctgaagatattagaggctgcatacagatggaagaaacagaagata
gtttctgatgattag
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