Pistacia vera (pistachio): 116130007
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Entry
116130007 CDS
T07386
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116130007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvy03041
]
116130007
03036 Chromosome and associated proteins [BR:
pvy03036
]
116130007
Spliceosome [BR:
pvy03041
]
Complex B
Other components
Prp19-related factors
116130007
Complex C
116130007
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
116130007
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_14
HAT
Suf
TPR_16
TPR_19
TPR_CcmH_CycH
HAT_Syf1_M
U3_assoc_6
TPR_2
Motif
Other DBs
NCBI-GeneID:
116130007
NCBI-ProteinID:
XP_031271616
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MASKDADPSLGYLTREDTKVKLLRPTRVKNKTPAPIQITAEQSLREAWERQEAEIRPPKQ
KITDSTELADYRLCKREEFEDLIRRVCWNISVWIKYVQWEESQKDFERARSVWECALEVD
YRNHTLWLKYAEAEMKNKFINRARNVWDGAVTLLPRVDQLRYKYIHMEEMLGNVAGARQI
FERWMNWMPDQQGWLSYIKFELRYNEVDRARQIFEWFVQCHPKVTAWIRYAKFEMKNGEV
DRSRNVYERAVEKLADDEEAELLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLY
RKFVAFEKQYGDKEGIEDAIVGKRRFQYEDEVRKNPMNYDTWFDYIRLEESVGNKERIRE
VYERAIANVPPAEEKRYWQRYIYLWINYTLYEELDAEDVERTRDVYRYEEYIDYLFPEES
QTTNLKILEAAYRWKKQKITL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcatctaaagatgcggatccttccttgggatacctcacgcgcgaggacaccaaggtg
aaactactgcgtcctactcgagtcaagaacaaaaccccagctccgatacaaatcactgct
gaacaaagtttacgtgaagcttgggaacgtcaagaggctgaaatccggccacctaaacag
aaaatcactgactctactgagcttgctgactatcgtctttgcaagagggaggaatttgag
gatttaattcgtagagtgtgctggaatattagtgtgtggattaagtatgtgcagtgggag
gagtctcagaaagattttgagcgcgctcgaagtgtgtgggaatgtgcgttggaagttgat
taccgcaaccacactctttggttgaagtatgctgaggcagagatgaagaacaagttcatt
aacagggcacggaatgtttgggacggtgcagtcacattgttaccacgtgtggatcaacta
cggtataaatatattcacatggaagaaatgcttgggaatgttgctggagctaggcagatt
tttgaaaggtggatgaactggatgcctgatcagcaagggtggttgtcatatataaaattt
gagcttcggtataatgaagttgaccgtgctaggcagatttttgaatggtttgttcagtgc
cacccaaaagttacagcatggattcgttatgccaagtttgagatgaaaaatggagaagtt
gatcgttcaaggaatgtttatgaacgtgcggtggagaaattggcagatgacgaagaggct
gagttgttgtttgttgcatttgcagagtttgaggagagatgtaaggagacagagcgtgct
agatgcatttataagtttgcattggatcatataccaaagggcagggctgaagacttatat
agaaagtttgtggcctttgagaaacagtatggagataaggaagggattgaggatgctatt
gtgggaaagaggaggtttcaatatgaggatgaagtgagaaagaatccaatgaattatgac
acatggtttgactacattaggttagaagagagtgtaggaaataaggaaaggattagggag
gtttatgagcgtgccattgctaatgtgccaccagctgaggagaagagatattggcaaaga
tatatatacttgtggattaattatacactgtatgaggaactggatgcggaagatgtggaa
cggacacgagatgtctataggtatgaagagtacatcgactatctgttccctgaggaatcg
cagactacaaatctgaagatattggaggctgcatacagatggaagaaacagaagataact
ctataa
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