Pistacia vera (pistachio): 116140886
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Entry
116140886 CDS
T07386
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03022
Basal transcription factors
pvy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116140886
09124 Replication and repair
03420 Nucleotide excision repair
116140886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvy03021
]
116140886
03400 DNA repair and recombination proteins [BR:
pvy03400
]
116140886
Transcription machinery [BR:
pvy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116140886
DNA repair and recombination proteins [BR:
pvy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116140886
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
116140886
NCBI-ProteinID:
XP_031282321
LinkDB
All DBs
Position
Unknown
AA seq
70 aa
AA seq
DB search
MVNAIKGLFISCDIPMAQFIINLNASMPTSQKFIIHILDNTHMFVQPHVAEMIRSAVADF
RDANSYEKPT
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacgccattaaaggactgtttatttcctgtgacatacccatggcacaattcatc
attaacttaaatgcatcgatgcccacgtcacagaaattcataatacacatcttggataac
actcacatgttcgtgcaaccacatgtagctgaaatgattcgaagtgccgttgctgatttt
agggatgcaaattcctacgagaagcctacataa
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integrated database retrieval system
