Pistacia vera (pistachio): 116144224
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Entry
116144224 CDS
T07386
Name
(RefSeq) probable methionine--tRNA ligase isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy00450
Selenocompound metabolism
pvy00970
Aminoacyl-tRNA biosynthesis
pvy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
116144224
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116144224
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvy01007
]
116144224
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvy03016
]
116144224
Enzymes [BR:
pvy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
116144224
Amino acid related enzymes [BR:
pvy01007
]
Aminoacyl-tRNA synthetase
Class I (U)
116144224
Transfer RNA biogenesis [BR:
pvy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
116144224
Prokaryotic type
Other AARSs
116144224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1g
Anticodon_3
tRNA-synt_1
tRNA-synt_1e
Anticodon_1
C1_1
Motif
Other DBs
NCBI-GeneID:
116144224
NCBI-ProteinID:
XP_031285532
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MRIDYNVSTTKSLASYFSNPLKYRVSVTSLCRKLKQSRLQTLSLSVVVSMEDQQHESEKN
KKEAKVPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARYCRLRGYNVIYICGTD
EYGTATETKALEENCSPQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEVCQAIFKK
LLENNWLSENKMQQLYCDACERFLADRLVGGTCPTLGCNYDSARGDQCEKCGKLLNPTEL
IDPRCKVCQMTPRIRDTNHLFLELPLIKDKLEEYINNMSVAGSWSQNAVQATYAWLKEGL
KPRCITRDLKWGVPVPHEKFKDKVFYVWFDAPIGYISITSCYTSDWEKWWKNPENVELYQ
FMGKDNVPFHTVMFPSTLLGTGENWTLMKSISVTEYLNYEAGKFSKSKGVGVFGNDAKDT
NIPSEVWRYYLLTNRPEVSDTLFTWEDFQAKLNSELLNNLGNFVNRVLSFIVKPPGRGYG
SVVPDAPEADLHPLTKVLAEKLGNYVDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQ
FWKLYNEDKASCSVVMRTSVGLVYLLACLLEPFMPSFSLEVLKQLNFPIDKQFSLSDETG
GLERARKPWELLPVGHRIGTPSPLFKELKDEDVKLLREKFAGSQADRAVKTQAEAKKITE
KLKKTKISAPSD
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgattataacgtctcaactacaaagtctcttgctagttacttctctaatcct
ctgaaataccgtgtttcagttacttctctctgtcgcaagctgaaacaatctcgtttacaa
accttgtctctctctgtggtggtttctatggaggatcaacaacatgagagtgaaaaaaat
aagaaggaagcaaaggtaccaatacccggaaaaagaaacatactaataaccagcgccttg
ccttacgtcaacaacgttcctcatcttggcaacatcattggcagcgttttaagtgctgat
gtttttgctcgctactgccgactccgtggctataatgttatttacatatgtggaactgat
gagtatggtacggccactgaaactaaggctttggaggagaattgttccccgcaacagatt
tgcgataaatattatgcaatacataaagcagtttacaattggtttaatataagttttgat
gaatttggacgcacatcaactcctcagcaaacggaagtttgccaagcaattttcaagaaa
ttgttggaaaacaactggctttctgaaaataaaatgcagcagctttactgcgatgcatgt
gaacgattcttagctgaccggcttgtgggaggcacctgcccaacacttggctgcaattat
gattctgcacggggagatcaatgtgaaaagtgcggaaaactgttgaatccaacagaactt
atagatcccagatgcaaggtatgtcagatgactccaagaattcgtgatacgaaccacttg
tttctggagctcccactgattaaagataaattggaagaatatatcaataacatgtcagtt
gctggatcttggagccagaatgctgtgcaagctacatatgcatggctcaaagaagggctg
aaacctcgctgtattaccagggatcttaagtggggtgttcctgttccacatgaaaaattt
aaggataaggtcttctatgtatggtttgatgcgcctattggttatatctctattacttca
tgctatacttctgattgggagaaatggtggaagaaccctgaaaatgtggagctatatcaa
tttatgggaaaggacaatgtaccattccacactgtgatgtttccgtccacacttcttggg
actggagaaaactggacgctaatgaagagcattagtgttacagagtacttaaactatgaa
gcaggaaagttctccaagagcaagggagtaggagtttttggcaatgatgccaaagataca
aatatcccttctgaagtgtggagatattatttgctaactaacaggccagaggtctcagac
acactgtttacatgggaggacttccaagcaaaattaaatagtgagttgctgaataatttg
ggcaattttgttaatcgagtactgagcttcattgtcaaacctccaggacgaggatatgga
tctgtcgttcctgatgctccagaggcagatttacaccccttaacaaaggtgttagctgaa
aaacttggaaactacgttgaccaatacatagaagccatggagaaggttaaactaaaacaa
ggactgagaattggaatgagcatctctagtgaggggaatgcatatcttcaagagagccag
ttctggaagctttacaatgaagataaagcttcctgctctgttgttatgagaacttcagtg
gggctagtgtatcttctagcatgtttgttagaacctttcatgccttcattttctcttgag
gtactgaaacagcttaattttccaattgataaacaattttcactttctgatgaaactgga
ggtcttgagagggcaagaaagccttgggagcttctacctgttggtcatcgaattgggaca
ccatccccactatttaaggaactgaaagatgaggatgtgaagttactgagggagaagttt
gctggaagtcaagctgatagagctgtaaagacacaagctgaagcgaagaagataacagaa
aaattgaagaaaacaaaaatctctgcaccatcagattga
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