Pectobacterium versatile: OA04_41200
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Entry
OA04_41200 CDS
T07772
Symbol
pelB
Name
(GenBank) pectate lyase II
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pvz
Pectobacterium versatile
Pathway
pvz00040
Pentose and glucuronate interconversions
pvz01100
Metabolic pathways
pvz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
OA04_41200 (pelB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OA04_41200 (pelB)
Enzymes [BR:
pvz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
OA04_41200 (pelB)
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AVT60583
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Position
4458073..4459197
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AA seq
374 aa
AA seq
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MKYLLPTAAAGLLLLAAQPAMAANTGGYATTDGGEVSGAVKKTARSMKEIVDIIEAAQVD
SKGKKVKGGAYPLIITYSGNEDSLIKAAEKNICSQWSKDARGVQIKEFTKGITIQGTNGS
SANFGVWIVNSSNVVVRNMRFGYMPGGAQDGDAIRIDNSPNVWIDHNEIFAKNFECKGTP
DNDTTFESAVDIKKGSTNVTVSYNYIHGIKKVGLSGASNTDTGRNLTYHHNIYSDVNSRL
PLQRGGLVHAYNNLYDGITGSGFNVRQKGIALIESNWFENALNPVTARNDSSNFGTWELR
NNNITKPADFSKYKITWGKPSSPHINADDWKSTGKFPAVSYKYTPVSAQCVKDKLANYAG
VGKNLAVLTAANCK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctattgcctacggcagccgctggattgctattactcgcggctcaacccgca
atggccgcaaatacgggcggctatgccactacggatggtggagaagtgtccggtgccgtg
aaaaaaacggcacgttccatgaaagaaattgtggatattattgaagccgcgcaagtggat
tcaaaaggcaagaaagtcaaaggcggtgcttacccgctcatcatcacctatagcggtaat
gaagactcattaatcaaagcggctgaaaagaatatctgcagccagtggagtaaagacgca
cgcggcgtacaaatcaaagagttcaccaaaggcattactatccagggcaccaatggctca
tccgccaacttcggtgtctggattgtgaactcttctaatgtcgtggtacgtaacatgcgc
tttggctatatgccgggcggcgcgcaagacggcgatgccattcgtatcgataactccccg
aacgtctggatcgaccacaacgaaatctttgccaagaactttgagtgtaagggcacgcca
gacaatgacaccacctttgaatcggctgtcgatatcaaaaaagggtcaactaacgtcacg
gtatcctacaattatattcatggtatcaagaaagtcggcctgagcggcgcaagcaatacg
gatacgggccgtaacctgacttaccatcacaatatttatagcgatgttaactcacgcctg
ccgctgcaacgtggtggtctggttcacgcgtacaacaacctgtatgacggcatcaccggt
tcaggctttaacgtgcgtcagaaagggatcgcactgattgaaagcaactggttcgagaat
gcgctcaacccagtgacagcacgtaacgacagctcaaactttggtacctgggagctgcgt
aacaacaacatcacgaaaccggcagacttctccaaatacaaaatcacctggggcaagcct
tcctctcctcacatcaatgcggatgactggaagagcaccggtaagttccctgccgtctcc
tataagtacactccagtttctgcacagtgcgtgaaggataaactggcaaactatgctggc
gtcggtaaaaacctggcagtactgacagcagctaactgcaaataa
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