Pectobacterium parmentieri WPP163: Pecwa_0021
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Entry
Pecwa_0021 CDS
T01106
Name
(GenBank) ABC transporter related protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pecwa_0021
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pwa02000
]
Pecwa_0021
Transporters [BR:
pwa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Pecwa_0021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_22
AAA_21
AAA_29
AAA_16
NACHT
TniB
NB-ARC
RsgA_GTPase
Mg_chelatase
Sigma54_activat
AIG1
nSTAND1
DUF87
AAA_7
nSTAND3
Myosin_head
DUF3987
Motif
Other DBs
NCBI-ProteinID:
ACX85890
LinkDB
All DBs
Position
24602..26407
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AA seq
601 aa
AA seq
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MTAPIMSVSHLTTAFQVNGEWMNVVRDLSFTIGEKETVAVVGESGSGKSVMAKSIMRLLP
PGQSRVEGQIHFGDTELLSLPNKAMQDVRGNRIGMIFQEPMTSLNPVLPIGYQITEVLRR
HRGMGKAEARAEAVRLLEKVRIPAAKSRLNEYPQSFSGGMRQRVVIAIALACHPKLLIAD
EPTTALDVTIQAQILTLIKTLQEEEGMSVLFITHDMGVVAEVSDRTLVMYQGEMVENAVT
REIFHHPQQPYTRMLLSAVPKLGSMSGSLWPQRFPLVDLKTGERQPVPEAVNTVSGEEPV
LTVKNLVTRFDIRSGFFRRLSGRVHAVENVSFDLWPGETLALVGESGCGKSTTGRSIIRL
NDAVSGDIQLLGKNILTADKRELTDSLRQIQMVFQDPYESLNPRMRIGEAIAEPMLLHGL
ATRQNVDARVSELLEQVGLSGDMASRFPHQFSGGQRQRVCIARALALEPKVIIADESVSA
LDVSVKAQVINLMLDLQQTLGLSFLFISHDMAVVERISHRVAVMYLGEIVEIGPRSAIFD
NPQHDYTRRLISAVPVPDPDTRPVRNITNDELRSPVRAPDFHPPERCYKQVGEGHFVLEQ
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgccgattatgtctgtttcgcatctgaccacggcctttcaggtaaatggcgag
tggatgaacgtggtgcgggatttatcctttacgattggcgagaaagagacggtcgccgtg
gtgggggagtccggttcagggaaaagcgtgatggcgaaatctatcatgcgtttgctgccg
cccggccaaagtcgggttgagggacagattcattttggcgacaccgagctgctgtcgctc
cctaataaagcgatgcaggatgtgcgcggcaaccgcatcggcatgatttttcaggagccg
atgaccagcctgaatccggtcttgccgattggctaccagatcacggaagtgctacgtcgc
catcgcggtatgggtaaagcggaagcgcgcgccgaagcggtacgcctgttggaaaaggtg
cgtattccggcggcgaaatcgcggttgaacgaatatccgcaaagcttctccggcgggatg
cgccagcgtgtggtgattgcgattgcgctggcctgtcaccctaagctgttgatcgccgac
gaaccgacgacggcgctggatgtgactattcaggcgcaaattctgacgctgataaaaacc
cttcaggaagaagaagggatgtcggtgctgtttattacccatgacatgggcgtcgtggcg
gaagtgtccgaccgcacgctggtgatgtatcagggcgaaatggtggaaaatgccgtcaca
cgggaaatttttcatcatccgcaacagccctatacccgcatgttgttatccgctgtgcct
aaattaggttcgatgtctggcagcctgtggccgcagcgctttccgctggtggatctcaag
acgggcgagcgccagccggtgccggaggcggtgaataccgtgtcgggcgaggagccagtg
ctgacggtaaaaaatctggtcacccgatttgatatccgatcaggttttttccggcgactg
tccgggcgagttcatgcggtggagaatgtctcgttcgatctttggccgggagaaacgctt
gcgctggttggggaatcaggctgcggtaaatctaccacggggcggtcgattattcgcctt
aacgatgccgtcagcggcgatattcaactgctgggaaaaaatatcctgacggcggataag
cgtgagctgacggattcactgcggcagattcagatggtgtttcaagacccgtatgaaagc
ctgaatccgcgtatgcggataggggaagcgattgccgaaccgatgctgctgcacgggttg
gcgacccgacagaatgtggatgcaagagtaagtgaactgctggaacaggtagggttatct
ggcgatatggcctcgcgcttcccgcaccagttctccggcgggcagcggcagcgcgtgtgt
attgcccgtgcactggcgctggagccgaaagtgattattgctgatgaatcggtatcggcg
ctggatgtgtccgttaaggcgcaggtgatcaacctgatgctggatctccagcagacgctg
ggactgtcattcctgtttatctcgcacgatatggccgttgtcgagcgtatcagccaccgc
gtggcggtgatgtatctcggcgaaatcgtggagatcggcccacgttcggcgatcttcgac
aacccgcagcatgattacacccgacgtctgatttctgcggtgccggtgcctgacccggat
actcgtccggtgcgtaatatcaccaatgatgaactgcgcagcccggtacgcgcccccgat
ttccaccctcctgaacgctgttataagcaagtcggagaggggcacttcgttctggaacag
gcgtag
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