Pectobacterium parmentieri WPP163: Pecwa_1193
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Entry
Pecwa_1193 CDS
T01106
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pecwa_1193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pwa03400
]
Pecwa_1193
Enzymes [BR:
pwa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Pecwa_1193
DNA repair and recombination proteins [BR:
pwa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pecwa_1193
Prokaryotic type
Pecwa_1193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACX87007
LinkDB
All DBs
Position
complement(1291484..1292170)
Genome browser
AA seq
228 aa
AA seq
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MATSLTWHDVLAQEKQQPYFINTLEFVGKERAAGKTIYPPQKDVFNAFRFTELHQVKVVI
LGQDPYHGPNQAHGLSFSVRPGVPAPPSLGNIYKELASDIPGFEIPRHGFLQSWAEQGVL
LLNTVLTVEAGQAHSHANLGWETFTDRVIAALNEQREGLVFLLWGSHAQKKGNIIDQQRH
HILKSPHPSPLSAHRGFLGCKHFSQANQLLEQQGLSPIDWTPRLPEEA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctctctcacctggcatgacgtgctggcacaagaaaagcagcagccttacttc
attaatacccttgaattcgtggggaaagaacgagcagcgggtaagactatctatccccca
cagaaggatgttttcaacgcgttccgttttaccgaactgcatcaagtcaaagtcgtcatt
ctggggcaagatccctatcacggcccgaatcaagctcacgggctgtcattttctgtacgt
ccgggcgtccccgccccgccttctctaggtaatatttataaagagctggcgagtgacatc
cctggatttgaaattccacggcacggttttctgcaaagctgggcggagcaaggtgtttta
ctgctaaacacggtattaacggttgaagctgggcaagcgcattcgcatgccaatctgggc
tgggaaacctttactgaccgcgtcattgcagcattgaatgaacagcgggaaggtttggtc
tttcttttatggggctcgcatgcacagaaaaaaggcaacatcattgaccagcagcgccac
catattctgaaatcgccgcacccttccccactatctgcacaccgtggatttctgggttgt
aagcatttttcgcaggccaatcagcttctggaacagcaaggattatcgccaatagactgg
acgccaaggcttccggaagaggcctaa
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