Pectobacterium parmentieri WPP163: Pecwa_3162
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Entry
Pecwa_3162 CDS
T01106
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa00300
Lysine biosynthesis
pwa01100
Metabolic pathways
pwa01120
Microbial metabolism in diverse environments
pwa01230
Biosynthesis of amino acids
Module
pwa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pecwa_3162
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pwa01002
]
Pecwa_3162
Enzymes [BR:
pwa01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Pecwa_3162
Peptidases and inhibitors [BR:
pwa01002
]
Metallo peptidases
Family M20
Pecwa_3162
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
ACX88904
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All DBs
Position
3445394..3446521
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AA seq
375 aa
AA seq
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MSCPVIELAQQLIKRPSLSPNDEGCQALMIERLTAIGFTVEAMDFGDTQNFWAWRGTGKT
LAFAGHTDVVPSGDENHWQHPPFEPIIRDGMLYGRGAADMKGSLAAMVIAAERFVAAHPN
HQGRLAFLMTSDEEASAVNGTVKVVDALMARNERLDYCLVGEPSSTHVVGDVVKNGRRGS
ITANLRVHGVQGHVAYPHLADNPVHRATPALNELIATEWDQGNEFFPPTTMQIANIQAGT
GSNNVIPGELFVQFNFRFSTELTDVLIQQRVAELLDRHQLNYTIDWKLSGQPFLTARGEL
VDAVVNAVKHYNEVTPELLTNGGTSDGRFIARMGAQVVELGPVNATIHKVDECVSAADLQ
LLSRMYQRIMEQLIA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttgcccagtcatagagcttgctcaacagttaattaaacgcccttccctcagcccg
aacgacgagggctgtcaggcactcatgattgaacgcctgacggcgatcggctttaccgtc
gaagcgatggattttggcgatacccaaaacttctgggcatggcgcggcaccggaaaaacg
ctggccttcgcgggtcacaccgacgtggttcccagcggcgatgaaaaccactggcagcat
ccgccgtttgaacccatcattcgtgacggcatgttgtacggtcgcggcgcagcggacatg
aaaggttcactggctgcgatggtgattgctgccgagcgtttcgtcgccgcccatccaaac
catcagggacgtctggcatttctgatgacgtcagacgaagaagccagcgcggttaacggc
accgtaaaagtggttgatgcgttgatggcacgcaatgagcggttggattactgtctggtc
ggcgaaccatccagtacccatgtcgtgggcgatgtagtgaaaaatggccgccgtggttct
atcactgcgaatctgcgcgtacacggggtgcaagggcacgttgcctatccgcatctggca
gacaaccctgttcaccgtgccacaccggcgctcaacgaattgatcgccaccgagtgggat
cagggcaacgaattcttcccgccaaccacgatgcaaatcgccaatattcaagcgggtacg
ggtagcaataatgtcatccccggcgaactgtttgtgcaatttaatttccgtttcagcacc
gaattaacggatgtattaatccagcagcgtgtagcggaattactggatcgccaccagctt
aattacaccatcgactggaagctctccggccaaccgttcctgaccgcacggggcgaactg
gtcgatgccgtagtgaatgccgtcaagcactacaacgaagttaccccagagctgctgacg
aatggcggcacctccgatggtcgtttcattgcccgcatgggtgcgcaggtggttgaactc
ggccccgttaatgccacgatccacaaagtggatgaatgcgtcagtgcggcagacctgcaa
ctgttgagccgcatgtaccagcgcattatggagcaactcatcgcatga
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