Pleurodeles waltl (Iberian ribbed newt): 138249986
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Entry
138249986 CDS
T10800
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
138249986 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwl03021
]
138249986 (POLR1A)
Enzymes [BR:
pwl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
138249986 (POLR1A)
Transcription machinery [BR:
pwl03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
138249986 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Pox_C7_F8A
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
138249986
NCBI-ProteinID:
XP_069060380
LinkDB
All DBs
Position
1_2:complement(1229557841..1229919797)
Genome browser
AA seq
1728 aa
AA seq
DB search
MVIGKEVPWRRLQGISFGIYSANEIRKLSVKAITNPRYLDNVGNPAVNGLYDLSLGPADN
KEVCSTCAQGFHNCPGHMGHIDLPLPVYNPLFFDKLYLLVRGSCFSCHMLTCPRAVIHLL
LNQLKALDAGNLHAVYEIEAALNRFLEGNPNASGNDIQEELDAFTSEILQNHDSGLQSLQ
VKNVCECKSNLVGQFWKAHMNAKRCPHCKSGRSVVRKEHNSKLTITYPATVQKSQKNLKG
GLQQMDTIDNTQLGKRGYLTPSTAREHIISLWENEGFFLNRIFSGLENSGNLESEFSPDM
FFLDLIAVPPARYRPVNRMGDQMFTNGQTVNLQAVMKDVAVIQKLLALMAKEQTQPPEMT
ETEIQPVESQELDTMDRAFLANLVGVTLTDKLYSAWIHLQSHANIVFDSDMDRLMTEKYP
GIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPW
NAQELRKAVLNGPNIHPGATMVINEDGSRTALSSTDPAQREAIAKQLLTPPTGVQITGMK
VVCRHIKNGDVLLLNRQPTLHRPSIQAHRARVLPGEKVLRLHYANCKAYNADFDGDEMNA
HFPQSELGRAEAYTLACTDEQYLVPKDGKPLAGLIQDHMVSGTSMTIRGCFFSRDQYMAL
VYRGLTDKKGRVKMLAPAILKPFPLWTGKQVVSTLLLNVIPEHHVPLNLTGRAKISGKAW
VKGHPRATPGFDPETMSESQVIIRKGELLCGVLDKAHYGSSAYGLVHCCYELYGGETSGK
LLTCLARLFTAYLQLYRGFTMDVEDILVRRRANLKRRKIIEESMHCGARAVRAAFNLPET
ASAEELQGKWEDAHLSKEQRDFNMVDLKFKEEVNHFSNEINKVCMPLGLHRSFPENNLQM
MVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPRSGGFVTGRFL
TGIKPYEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQ
FLYGEDGLDIPKTQFLQPKQFPFIAENYEVIKMSKHLDEVLAKMNPEQANKHFRLIKRWK
AKNPVCVSRQGAFLMYSQKKMAELQLEDQTGQLINGRSFATQELLEKWYSLEEKSRRKYL
KRASALPVPCLAVLQPDIYFGSVSETFESKVDDYIGEWDAEKSVSCVSSELSLERLKTLL
HLKWQRALCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVAS
ANIKTPMMSVPVCNTKRALKKVKRLKKKLTRVCLAEVLEKVDVEDTFRVESKFSKFNVCR
IKFHFLPHGFYQQEKCLRPDDILRYMETKFFKLLLDVIKRKSAKAASLRVVNTRKATRKD
LDSAEDSQGIRPQDDDEAEQDDEVRIVDAEADEGDDDATEAKRKEKQDDEIDYESEEEEN
DGNEENAEELNEDDPPSHTRRARSDAENGDEDNGAAISEEHLETTSLLCQATKKGGTRAA
HTEEAKELRINAVLSGLQAVESYTYDTENGLWCEITLKLPLIKVHFDISSVVFTLAQTAV
VYETRGITRCLLNESTDKTGDRELMLNTEGINLPELFRYADILDLRRLYTNDIHAMANTY
GIEAALRVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGVYKPLNRLGMQSNSSPLQQM
TFETSYKFLKQATMMGAHDELRSPSACIVVGKVVKGGTGLFDLKQPLK
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcggcaaagaagtaccttggagacgcttgcaagggatctcattcgggatctac
tcagccaatgagatcaggaaattgagtgtgaaggccataactaacccacgatacttggac
aatgttggcaatccagcagtcaatggactctatgacttgtctttgggccctgcagacaac
aaggaagtctgcagtacatgcgcccagggctttcataactgccctggacatatgggacac
attgatctcccacttccagtctacaatcccctcttctttgacaaattgtacttactggtg
cgtggttcctgtttcagctgccatatgctgacgtgcccgcgagctgtgatccacttgctg
ctgaaccagctgaaagcactggatgcgggaaatcttcatgcagtgtatgagatcgaagct
gcacttaataggttcctagaaggaaatccaaatgcctctggcaatgacattcaggaagaa
ctagatgcgtttacatcagaaatactacagaaccacgactctggtctccagagtttacaa
gtgaaaaatgtctgtgagtgcaaaagcaatctggttgggcagttttggaaggcacatatg
aacgcgaagaggtgtccgcactgcaagagtggaagatctgttgtaagaaaagaacacaac
agcaaattaaccatcacatatccagctactgtccaaaaatcacagaagaatctgaaagga
gggcttcagcagatggacacgattgacaacacacaattgggcaagcgaggttatttaaca
ccaagcacggccagggagcacatcatctccttgtgggaaaatgaagggttttttctgaat
cgcatcttttctggacttgaaaatagtggaaatttggagtctgaattcagtcccgatatg
ttctttcttgacctcattgctgttccacccgctaggtatcgtcctgtgaaccgcatgggg
gatcagatgtttaccaatggtcagactgtgaatttgcaagctgtcatgaaggatgttgca
gtgatacagaagctgttggcactcatggctaaggagcagacccagccaccagaaatgacg
gagacagaaatccagccggtagagagtcaagagttggatactatggatcgggcattcctg
gccaatctcgtaggggtgaccctgacagacaagctgtacagtgcctggatccatctacaa
agccacgcaaacattgtatttgacagcgacatggatagattaatgactgaaaaataccca
gggattcgccagatcttagagaagaaggaaggattgttcaggaagcacatgatggggaag
cgtgtggactacgcggcacgctcagttatttgccctgacatgtacataaacaccaatgag
attgggatacctatggtgtttgctaccaaactgacatacccgcagcccgtaaccccttgg
aatgctcaagagctgcggaaagcagttctaaatggtccaaatattcatcccggtgccacc
atggtgatcaacgaagatggatctcgtacagccctgagctcaacagacccggcacagaga
gaggccatcgccaagcaactcctgacccctccgacaggtgtccagataaccgggatgaaa
gttgtgtgccgccatataaagaacggtgatgtcctgttactaaatcggcagcccaccctg
cacagaccctccatccaggcccaccgtgccagagtcctgcctggagagaaagttctgcgg
ctgcattatgccaactgcaaggcttacaatgctgactttgatggtgatgaaatgaacgct
cactttccgcagagcgagctggggcgggctgaagcctatactttggcatgcacagatgaa
cagtatttagttcccaaggatggaaagccactggcaggtttgattcaagatcacatggtt
tctggtacgagcatgacaattcgaggatgcttcttttcaagagatcagtacatggctctg
gtttaccgaggactgactgacaagaaggggcgtgtaaaaatgctggcccctgctattctg
aaaccatttcctctatggacaggaaaacaggttgtttccacattgcttttaaatgtcatc
ccagagcatcatgttccactcaatttgacgggtagagcgaaaattagtgggaaggcatgg
gtgaagggacatcctcgtgcaactcctggatttgaccccgagaccatgagtgaatctcag
gttattattagaaaaggggagttactctgcggtgttctggacaaagcacactatggcagc
tcagcttatggcttggtgcactgttgctatgaactctatgggggtgaaaccagcggtaag
ctgcttacatgtctagctcgactcttcacggcgtacttgcagctctaccgaggatttaca
atggacgtggaagacattttagtcagacgcagagcaaatttgaaaagacgaaaaattatt
gaagaatccatgcattgtggtgcccgggctgtgagagctgcgttcaacctgccagaaaca
gcgtcagctgaggagctccaagggaagtgggaagatgcccatcttagcaaagaacagagg
gatttcaacatggtggatctgaagttcaaggaggaggtcaaccatttcagcaatgagatt
aacaaggtatgcatgcccctggggcttcacagatccttcccagagaacaacctacaaatg
atggtgcagtcgggagccaaggggtcaactgtgaatactatgcagatttcatgcctgctt
ggtcagattgagttagaaggccggcgtcccccactgatggcatcgggtaaatctttgccc
tgcttccagccgtatgacttctcgcctagatcaggaggttttgtgactggtcgcttcctt
actggaattaagccttatgaattcttctttcattgcatggctggtagagaaggtcttgtg
gacacagctgtgaaaaccagccgctctggatatcttcagaggtgcatcataaaacacttg
gaagggttggtggtacagtacgacctgacagtacgcgacagtgacggaagtgtggttcag
ttcctttatggtgaagatggcttggacatcccaaagacgcagtttctgcagcccaaacag
tttcctttcatcgctgaaaactacgaggtaataaaaatgtctaagcacttagatgaagtt
ttggccaaaatgaatccagagcaggctaataaacacttcagactcatcaagcggtggaag
gccaagaatcctgtgtgtgtatcccggcaaggtgcatttttgatgtatagtcagaaaaaa
atggctgagctccagcttgaggaccagacgggacaactcataaacggcagaagttttgcc
actcaagagttgttggaaaagtggtattccttggaagagaagagcagaaggaaatatctt
aaaagagcttctgctttgcctgttccatgcctggcagtccttcaacctgatatttatttt
ggttctgtatcagaaacatttgaaagcaaagttgatgactatatcggcgaatgggatgct
gagaaaagtgtaagctgtgtctcttcggagctgtcattagaaagattgaagacgttgctt
catttgaaatggcagcgggccttgtgtgaccccggagaggcagtggggctccttgccgct
cagagtattggggagccttccacacagatgacactgaacaccttccacttcgcaggtcgt
ggtgaaatgaacgtcacactgggtattcctagattgagggagatccttatggtagcaagt
gcaaacattaaaactcctatgatgagcgtgcctgtgtgcaacactaagagagccctgaag
aaggtgaaaaggttgaagaaaaagctcacccgggtttgtctggcagaggtgttggagaag
gtagatgtggaggacacattccgtgtggaaagcaagtttagcaaattcaatgtgtgccgg
ataaaattccacttcttgccacatggattttatcaacaggaaaagtgcctgagaccagat
gatattttacgctacatggaaaccaagttctttaagctcttactggatgtcataaagaga
aaaagtgcaaaggcagcatcacttcgagtggtgaacactcgcaaagccacgcgaaaggat
ctagacagtgcagaagactcccaaggaattcggcctcaagatgatgatgaagccgagcag
gacgatgaagtccggattgtagacgcagaagcagatgagggggatgatgacgccacagaa
gctaaaagaaaagagaaacaggatgatgagattgactatgagagcgaggaagaagagaat
gatggcaatgaggagaatgcagaagaactgaatgaggatgacccaccgtcccatactagg
cgggcccgctccgatgctgagaatggagatgaggacaatggtgcagccattagtgaagag
catcttgaaaccacttctttactttgtcaagcaacaaagaaggggggcaccagggcagct
cacactgaagaggcaaaggaactcagaataaatgctgtcctgagcggtctgcaggctgtg
gagagctatacttatgacacagaaaacggattgtggtgcgagatcacactgaaacttccc
ttgataaaggttcactttgacatttcctctgttgtcttcacgcttgctcagactgctgtt
gtctatgagaccaggggaatcaccaggtgccttttaaatgaatctaccgacaaaactgga
gaccgggaactcatgttaaacacagaaggaatcaacttacctgaactcttcagatatgct
gatattctggacctcagacgactttataccaatgacatccacgccatggccaatacctat
ggaatcgaagcggctctcagggttatcgaaaaggagatcaaagatgtatttgctgtttat
ggtattgaagtagatcctcgacacctgtcgcttgtggcagattacatgtgcttcgaaggt
gtttataagccattaaatcgcctgggaatgcaatccaactcctctcctctgcagcagatg
acatttgaaaccagctacaagttcctgaagcaagcgaccatgatgggtgcccatgatgag
cttcgctccccttctgcttgtattgttgtaggaaaagtcgtgaaaggaggcactggcttg
tttgaccttaaacaacctttaaaatag
DBGET
integrated database retrieval system
