Pleurodeles waltl (Iberian ribbed newt): 138250310
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Entry
138250310 CDS
T10800
Symbol
NALCN
Name
(RefSeq) sodium leak channel NALCN
KO
K21863
sodium leak channel non-selective protein
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pwl04040
]
138250310 (NALCN)
Ion channels [BR:
pwl04040
]
Voltage-gated cation channels
Sodium leak channel, non-selective
138250310 (NALCN)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
PsaF
DUF5914
FAM165
Motif
Other DBs
NCBI-GeneID:
138250310
NCBI-ProteinID:
XP_069061165
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Position
8:805079870..807344741
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AA seq
1737 aa
AA seq
DB search
MLKRKQSSRVEAQPVTDFGPDESLSDNADIVWINKPWVHSLLRICAILSVITVCMNTPKT
FEHYPPLQYVTFALDTLLMFLYTAEMIAKMHIRGIVKGDNSYVKDRWCVFDGFMVFCLWV
SLVLQVFEIAAVVDQMSPWGMLRIPRPLIMIRAFRIYFRFELPRTRITNILKRSGEQIWS
VSIFLLFFLLLYGILGVQMFGTFTYHCVTNDTQEGNVTWNNLAIPDTHCSPDGEGYKCPM
GFKCMDLKKLGLSRQELGYSGFNEIGTSIFTVYEAASQEGWVFLMYRAIDSFPRWRSYFY
FITLIFFLAWLVKNVFIAVIIETFAEIRVQFQQMWGSRSSTTSTATTQMFHEDAAGGWQL
VAVDVNKPQGRAPACLQKMMRSSIFHMFILSMVAVDVIVAASNYYKGETFKRHYDEFYLA
EVAFTFLFDLEALLKIWCLGFTGYISSSLHKFELLLVVGTTLHIYPDLYHSQFTYFQVLR
VVRLIKISPALEDFVYKIFGPGKKLGSLVVFTASLLIVMSAISLQMFCFVEELDRFTTFP
RAFMSMFQILTQEGWVDVMDQTLNAVGHMWAPVVAIYFILYHLFATLILLSLFVAVILDN
LELDEDLKKLKQLKQSEANADTKEKLPLRLRIFEKFPNRPQMVKISKLPSDFTVPKIRES
FMKQFIDRQQQDTSCLLRRLPSASSSSCDHSKRSGIEENKYIDQKLRKSVFSIRARNLLE
KETAVNKILRACTRQRMLSGSFEGQPAKERSILSVQHHIRQERRSLRHGSNSQRISRGKS
LETLTQDHTSTVRYRNAQREDSEIKMIQEKKEQAEMKRKVQEEELRENHPYFDKPLFIVG
REHRFRNFCRVVVRARFNASKTDPVTGAVKNTKYHQLYDLLGLVTYLDWVMIVVTICSCI
SMMFESPFRRVMHTPTLQIAEYVFVIFMSIELNLKIMADGLFFTPTAVIRDFGGVMDIFI
YLVSLIFLCWMPHNVPAKSGVQLLMVLRCLRPLRIFKLVPQMRKVVRELFSGFKEIFLVS
ILLLTLMLVFASFGVQLFAGKLAKCNDPHILRREDCHGIFRINVSVSKNLNLKLKPGEKK
PGFWVPRVWANPRNFNFDNVGNAMLALFEVLSLKGWVEVRDVIIHRVGPIHGIYIHVFVF
LGCMIGLTLFVGVVIANFNENKGTALLTVDQRRWEDLKSRLKIAQPLHLPPRPDNDGFRA
RMYDITQHPFFKRTIAVLVLAQSVLLSVKWDVNDKVTVPLATMSVVFTFIFVLEVTMKIT
AMSPAGFWQSRRNRYDLLVTSLGVIWVILHFALLNEYTYMMGACIIVFRFFSICGKHVTL
KMLLLTVVVSMYKSFFIIVGMFLLLLCYAFAGVVLFGTVKYGENINRHANFSSAGKAITV
LFRIVTGEDWNKIMHDCMVQPPFCTPDNSRYWETDCGNYAGALMYFCSFYIIIAYIMLNL
LVAIIVENFSLFYSTEEDQLLSYNDLRHYQIIWNMVDDKREGVIPTFRVKFLLRLLRGRL
EVDLDKDKLLFKHMCYEMERLHSGGDVTFHDVLSMLSYRSVDIRKSLQLEELLAREQLEY
TIEEEVAKQTIRMWLKKCLKRIRAKQQQSCSIIHSLRESQQQELSRFLNPPSIETTQPSD
DMSSNNQDSNMQPETSSQQQLLSPTLSDRGGYRQDSTDAGKPQRKFGQWRLPSAPKPISH
SVSSVNLRSGGRPTVKSVVCKMNQMSDTVSCGSEVKKWWTRQLTVESDESGDDLLDM
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaagaaagcagagctcaagagtggaagcccaacccgtgacggattttggtcct
gatgagtctttgtcagacaatgctgacatcgtttggattaacaaaccatgggtgcattcc
ttgctgcgtatttgcgccatcctcagcgtcattactgtttgcatgaacaccccaaagaca
ttcgaacattatcctcctctccagtatgtgacctttgccctcgacacactgctgatgttt
ctctacacggcagagatgatagcaaaaatgcacatcagaggcatagtgaagggggacaat
tcctatgtcaaggacagatggtgtgtctttgatggcttcatggtgttctgtctttgggtg
tcgttggtgctgcaggtatttgagattgctgccgtagttgaccagatgtcgccctggggc
atgctgcgcattccacgacctctaatcatgattcgagctttccgtatttacttccgattt
gagcttccaagaacgagaataacaaatattttgaagcgttctggggagcaaatatggagt
gtatccattttcttgctgttttttctacttttgtacggaatcctcggagtgcagatgttt
ggaacctttacatatcactgtgttacaaatgatacacaagaaggcaatgtgacctggaat
aatctagctattcccgatactcactgctcacctgatggagaagggtacaaatgtcccatg
ggctttaaatgcatggatctgaaaaaacttggactgagcagacaggagttgggctacagt
ggatttaatgagataggcaccagcatatttacggtgtacgaggcggcatctcaggaaggt
tgggtgttccttatgtaccgagccatcgacagcttcccgcggtggcgttcctatttctac
ttcatcaccttgattttcttcctcgcctggctcgtgaagaatgtcttcattgctgtcatc
atcgagacgtttgcagagatccgagtgcagttccagcagatgtggggctcgaggagcagc
acgacgtccacagctactacacagatgttccatgaagatgctgccggaggctggcaactc
gttgcagttgatgtgaacaagccccagggcagagctccagcatgcttacagaaaatgatg
agatcgtcaattttccacatgtttattctaagcatggttgcggtggacgtcatcgttgct
gctagcaactattataaaggagaaacgtttaagaggcactacgacgagttttatctggcc
gaggttgcattcacatttctgtttgatttggaagctcttctgaagatctggtgtttggga
tttactggatacattagctcgtctcttcacaagtttgagctcttgttggtagttggaaca
actctgcatatttatccagatctatatcactcacaattcacatattttcaggttcttcga
gtagttcgactgattaagatttcccctgctctagaagactttgtctacaaaatctttgga
cctggaaagaagcttggaagtttggttgtgtttacagcaagccttctgattgttatgtca
gcaattagcctacagatgttttgctttgtggaagaactagacagattcacaacattccca
agggcatttatgtcaatgttccagatactcacgcaggagggatgggtggatgtcatggat
cagactcttaatgctgttggacacatgtgggcacctgtagttgcaatctacttcatctta
tatcatctttttgccacactgattctgctaagcttgtttgtggctgtcatcctggataat
ctggagttggatgaagacctaaagaaacttaagcagctaaaacaaagcgaggccaacgcg
gatactaaggaaaagcttcctttacgtctacggatcttcgaaaaatttcctaacaggccg
caaatggtgaaaatatctaaactgccgtctgactttacagttcccaaaataagggaaagt
tttatgaagcaatttattgaccgtcaacaacaggacaccagttgcttactacgcagactt
ccgtcggcctcctcctcctcttgcgaccactccaaaagatctgggattgaggaaaataaa
tacattgatcagaagcttcgtaaatctgtcttcagcatcagggcaaggaatcttctggaa
aaagaaactgcagttaataaaattttaagggcctgcacaaggcaacgcatgctgagtgga
tcctttgagggacaacctgccaaggagcggtcaattctcagtgtgcagcatcacatccgg
caagagcgcaggtcgcttaggcatggctccaacagccagagaatcagcaggggcaaatcg
ctggaaaccctaacacaagatcataccagtacagtgaggtacagaaatgcacagagagaa
gatagcgaaataaaaatgatccaggaaaaaaaagaacaagcggaaatgaaaaggaaagta
caagaagaggaactgcgagaaaatcatccatactttgacaagcctttattcatagtaggc
cgtgagcatagattccgaaacttttgccgggtggttgtccgagctcgctttaatgcctct
aaaacagatccagtcaccggagccgtgaaaaataccaaataccatcagctttatgatttg
ctgggattggttacttatcttgactgggttatgatcgtggtgacgatctgctcctgcatt
tccatgatgtttgaatctccttttagaagagtaatgcatacgccaactttacagatcgca
gaatatgtgtttgtgattttcatgagcattgagctaaacctcaagatcatggcagatggc
ttatttttcactccaacagcagtcattcgagattttggaggagtcatggacatattcata
taccttgtaagtttaatatttttgtgttggatgccacacaatgttcctgctaaatctgga
gttcagctgttgatggttctacgatgcctaagacctcttcgaattttcaagctggtgcct
cagatgagaaaagttgtcagggagctttttagtggcttcaaggaaatatttctggtctca
atcctgttgctgacactaatgcttgtttttgcaagctttggagtccagctttttgctggg
aagctggcaaagtgtaatgatcctcatatcctgagaagggaagactgccatggcatattc
agaataaatgtcagcgtttccaaaaatctgaacttaaaactgaaacctggagaaaaaaag
ccaggattttgggtgccacgagtctgggcgaatcctcgaaactttaattttgataatgta
ggaaacgccatgctagccctcttcgaggttctctcccttaaagggtgggtggaagtccga
gatgtgatcattcatcgagtgggtccaattcatggcatctacatccacgtcttcgtattt
cttggctgcatgattggactgaccctttttgttggcgtggttattgcaaatttcaatgaa
aacaagggtactgctttgctgactgttgaccagagaagatgggaagatctgaaaagcaga
ctgaagatagcacaaccccttcatctgccacctcgccctgataatgacggatttagagct
agaatgtacgacattacccagcatccattttttaaacggaccattgctgtgcttgtgctg
gctcagtccgtccttctctctgtaaagtgggatgtcaatgacaaagtcacagtcccttta
gcaacgatgtcagtggttttcaccttcatttttgtgttagaggtaacaatgaagataact
gctatgtcacctgctggcttctggcaaagcagaagaaatcgctatgatcttctggttacc
tccctcggagttatttgggtgatacttcattttgctctactgaatgaatatacgtacatg
atgggcgcctgcataattgtcttccgcttcttctcgatttgtggaaagcatgttacactg
aaaatgcttctcctgacagttgttgtgagcatgtataagagtttcttcatcattgtgggc
atgttcttgctgttgctgtgttatgcatttgctggagttgtgttattcggcacagtaaaa
tacggagaaaacatcaataggcatgcaaatttctcttcggctgggaaagccatcactgta
ctctttcgcatagtaactggggaagactggaacaaaattatgcatgactgcatggttcaa
cctccattttgtactccagataacagcaggtattgggaaacagattgcggaaattatgca
ggtgcactcatgtatttctgttctttctacatcatcattgcatacatcatgctaaatctg
cttgttgctataattgtggaaaacttttccttgttttactcaactgaagaagaccaactt
ttaagctacaatgatcttcgacattaccaaatcatatggaatatggtagatgataagcga
gagggtgtgattcctacgttccgcgtaaagtttcttttgcggcttctccgtggaagactg
gaggtggaccttgataaagacaaactgttgtttaaacacatgtgctatgaaatggagcga
ttgcacagtggtggtgatgttacatttcatgacgttctcagcatgctttcgtatcgctca
gttgatatccggaaaagccttcagctggaagaacttcttgccagagaacagctggaatac
acaatagaagaagaggttgcaaaacaaacaatacggatgtggctgaaaaagtgcttgaaa
cgtatccgggcaaaacaacaacagtcctgcagcataatacacagtctccgagagagtcaa
caacaggagctgagtcgattcttgaatccgccgagcattgagacaacgcagccaagtgat
gatatgagcagtaacaatcaagacagtaatatgcagccagagacaagcagccaacaacaa
ctgctaagtccaactctttctgatagagggggatatcgccaagactctactgatgctggg
aaaccccaaagaaaatttgggcagtggcgtttgccttcagcccctaagcccatcagccat
tctgtgtcgtctgttaacctgcgctctggaggtcgcccaactgtgaaatctgtcgtgtgt
aaaatgaatcagatgtctgacaccgtgtcttgtgggtcagaggtcaaaaaatggtggaca
aggcaactaaccgtggagagtgacgaaagcggcgatgaccttcttgacatgtga
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integrated database retrieval system
