Pleurodeles waltl (Iberian ribbed newt): 138258946
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Entry
138258946 CDS
T10800
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
138258946 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pwl03400
]
138258946 (XPC)
DNA repair and recombination proteins [BR:
pwl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
138258946 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
138258946
NCBI-ProteinID:
XP_069062391
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All DBs
Position
9:complement(60605828..60682681)
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AA seq
1072 aa
AA seq
DB search
MVKRRGSVETAAKIEHKRPKGETARSPRGAGKGEPPKGAMCKGDVPKGPMPSPGVTNKRP
RAPIGATPKAPRRSVGKGAASNGPKNVTEGTPKVPRKAVVKGQATKGPAREALRGPGSCV
EKAVASVDPVDGQWKEENELMEVQDVFEDKKPPLKKSNRKVPCRRNTKVESKPGNVVTAL
GETGKKKAKPRGKQKMEDENNEIPCKLQKMLPDDAHQEKDVSVKEESDSESSDEDEDWEE
VAEINEPALDACGVPTLPELPLPSKPVEIEIETPELVKKRERREKKKAEFQAYLRRMMNR
FNKDVREDTHKVHLLCLLANGIYRNRVCSLPDLQAVALSIIPDNYTKQSTARVDLFFLSN
LVKWFIAAFTLTPELSADGREPLQSTLESRLGIFCARNEEEMVHVFLIILRSLQLLCRLV
LSLQPIPLKQPSAKEKKTSSGKSSSGASGEKGSAAKANKATSRKSAVRQGRKKVKTLSDD
DRGEEDGDVKSEKLSSPGSKRTADEIKLSKGVKSLKCLSDGESKVGVKEGMPMPKNQRRR
TVASKVSYKDESMSEESSDSDFLLSDTEDSTSSETDYGSSFQKKRRSSGSQSLKVNVARR
GDEGSTERNVAAKSLDKPKPSEVKLPPADTSKDSKKRSKIISSDEEEMEVTIASRGMDQW
VEVFLERENRWVCVDCIHNTINKPQLCYKAATKPMTYVVGIDNDGCVKDVTQRYDAIWMT
STRKRRVDAEWWEETLEAYKSPFTEREKKENQELQATLLEKPLPTSIVEFKNHPLYVLKR
HLLKYEAIYPESATILGYCKGEAVYSRECVHTLHSKDTWLKEARVVALGELPYKMVKGQS
NRARKARLADPENSDRDDLPLYGLWQTEDYQPPVAVGGKVPRNEYGNVYLFKPSMLPIGC
SHLHVPNLHRVARKLNIDCVPAVTGFDFHCGFSHPVTEGYIVCEEFQEVLLDAWNIEQTE
LEKKENEKREKRVYGNWKLLIKGLLIRERLKQRYGAKEEAAGSNLQGGAGFSSDEEEKPS
SEKPTSETPAQDATASWPQNRQAEEQSKGKPKRTTKREKKAEATHLFPFEKL
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagcgcaggggatctgtggagactgctgcaaaaatagagcataaacggcccaag
ggggagactgccaggagtcccagaggagctggaaaaggggagccacccaagggtgccatg
tgcaagggtgatgtgcccaaaggacctatgccttctccaggtgtgacaaacaaaagaccc
agggctcccataggtgctacgcctaaggctcccagacgttctgtgggcaaaggagcagca
tccaatggccccaaaaatgttacagaagggacacccaaggtgccaaggaaggctgtggtc
aaagggcaggcgaccaagggccctgcaagagaggcactaaggggtcctggcagttgtgtt
gagaaggcagtggcatctgttgatcctgtggatggtcagtggaaggaagaaaatgaatta
atggaagtgcaagatgtcttcgaagataaaaagccaccactaaagaaaagcaatagaaaa
gttccatgcagaagaaacaccaaagtagaaagcaaacctggaaatgttgtaacggcactg
ggagagaccgggaagaaaaaggccaaacctagaggaaaacaaaagatggaagatgaaaac
aatgaaataccctgtaagctacaaaaaatgctcccagacgatgctcaccaagagaaggat
gtctcggtcaaagaagagagtgacagtgaaagcagcgacgaggatgaggattgggaggaa
gtggctgaaattaatgagcctgcgctggatgcctgtggtgtgccgactcttccagagcta
cccctgccctcaaaaccagtggagattgagattgaaactccagagctggtgaagaagcgc
gagcgaagagaaaaaaagaaagcagagtttcaagcgtatctgagaagaatgatgaatcgg
ttcaacaaagatgtgcgagaggacacacataaggtgcacttgctgtgcttgctggcaaat
ggtatctaccgcaatcgggtatgcagtctaccagatcttcaagccgtggccttgtctatc
atccctgacaattatacgaaacaatcaactgcccgcgtggatctcttttttctgtctaat
ctggtgaagtggttcatcgcagcattcacactcactcccgagctatctgcagatggtcga
gaaccgttgcagtcaaccttggagagcaggttggggatcttctgtgccagaaatgaagaa
gaaatggtccatgtatttttaattattttaagatcattacagctactctgtcggctggtg
ttgtctttgcaacccattccattgaagcaaccgtcagcaaaggaaaaaaagacttccagt
ggtaaatcatcaagcggtgcttcaggagagaaaggaagtgctgccaaagcaaataaagct
acatcaagaaaaagtgcagtgcggcagggcagaaagaaggtgaagactctttcagatgat
gaccgtggagaggaagatggtgatgttaaatctgaaaagttgagctctcctggatccaaa
agaactgcagacgaaattaagttgagcaaaggtgtgaaaagtctgaagtgcctttcagat
ggagagagcaaagtgggtgttaaagagggaatgccgatgcccaaaaatcagcgtcggcgg
acagtggcctcaaaggtttcttacaaagacgaaagcatgagcgaggagtcgagtgattca
gattttcttctctcagacactgaggacagcacttcttctgagactgattatgggagctca
tttcagaagaaacggagatcctctgggtctcaaagtcttaaggtaaatgtagcaaggcga
ggtgatgagggcagcactgagaggaacgtagctgccaagagtttagacaaacccaaacct
tctgaagttaaattgccacctgcggacacttccaaggattccaagaagaggagcaaaata
atttccagtgatgaggaggaaatggaagtcaccatagcttccagaggcatggatcagtgg
gtggaggtattcctagagagggaaaacagatgggtttgtgtagactgtatacataacacc
attaacaagccacagctctgctacaaggctgctaccaagccaatgacttatgttgttgga
atagacaacgatggatgtgtgaaggatgtaacacagaggtatgatgccatttggatgact
tcaacaaggaaacggcgtgttgatgcagaatggtgggaggaaacattagaagcctataaa
agtccattcaccgaaagggaaaagaaggaaaaccaggagcttcaagctacgcttctagag
aagccattgccaacgtccattgtggaattcaagaatcaccctctttatgtattaaagagg
catctgttgaagtatgaggccatttacccagaaagcgctactattttaggctactgcaaa
ggagaggctgtgtactccagagagtgcgttcacacgctgcattcaaaagacacctggttg
aaggaagcccgtgtcgtggcgcttggggaattgccctataagatggtgaaaggacagtcc
aaccgtgcaaggaaggcgaggttggctgaccctgaaaatagtgatcgtgatgacctgcca
ctatatggtctctggcaaactgaggattaccagcctcctgtggctgttggtggcaaggtt
cctcgcaacgaatatggaaacgtgtatctatttaagcctagcatgttaccgattggctgt
tcccacctccatgttccaaatttgcatcgagtggcacgaaagctgaacatcgactgtgta
cccgctgtcacaggatttgactttcattgcggcttttcacacccagtcacggaagggtat
attgtctgtgaagaattccaggaagtgctccttgatgcctggaacattgagcaaactgaa
ctagaaaagaaagaaaatgagaaacgtgagaaaagggtttatggaaactggaaattacta
ataaaaggacttctgatccgagagaggctgaagcaacgatacggagcaaaggaagaggcc
gcaggttccaacctccagggaggagctggattttcatctgatgaagaggagaagcctagc
tcagagaagcccacttctgagacacctgcccaggatgcaacagcttcttggcctcaaaac
agacaagctgaggagcagagcaaagggaagccgaaacgaacaacgaagcgtgagaagaag
gccgaagccacacacttattccccttcgagaaattgtga
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