Pleurodeles waltl (Iberian ribbed newt): 138259135
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Entry
138259135 CDS
T10800
Symbol
TSEN2
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2 isoform X1
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pwl03016
]
138259135 (TSEN2)
Enzymes [BR:
pwl01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
138259135 (TSEN2)
Transfer RNA biogenesis [BR:
pwl03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
138259135 (TSEN2)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
138259135
NCBI-ProteinID:
XP_069062751
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All DBs
Position
9:complement(242659272..242772485)
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AA seq
467 aa
AA seq
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MCEAVFQAPRRKRKVYESYEAPFPIPLSEEGEFRLCKGQIINNHVLVSNPDDMMHLYAKG
YFGKGILSRSRPEYNISDPELAARWKGSRSKFPVISSAKYQCHVDWARSLMRKQGLRKWS
IDSILEDFTKPLDLPSQCDNEDVEVDKCKFESDSEFTNFQDEVKYLAISSLDNADPQTLP
PDSPSKSPVARKGCLEGDAAYDPLAKYGSDTVETSDNKELATIHCHRHDDLILHCGCNIS
QSPKQDHPGSINQQEHEHEYVLVPEEEMLFCSDGEEKEKEIKKEKLVCRRNPFQIFEYLQ
LSLEEAFFLVYALGCLNITYNEEPLPILKLWEVFSDVQPSFRSTYMAYHYFRSKGWVPKV
GLKYGTDLLLYRKGPAFYHASYSVIIELVDHQFHGSARRPFTWKSLAGLNRTTVNVSKEL
LFCYLIKPPDMTEEEMCSPECLKRIQVQELIVNRWVSSRERSEQDDL
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaggccgtgttccaagcgcccaggagaaagaggaaagtgtacgagtcatacgaa
gcaccatttcccatccctctctccgaggaaggagagttcagactgtgcaagggacagatc
atcaacaaccatgtgctggtgagcaaccctgacgacatgatgcacctgtatgcaaaggga
tattttggaaaaggaatactgtccagaagccgaccagagtacaatatatcagaccccgaa
ttggctgctcgatggaaaggttccagatccaagtttcctgtgatatcatcagcaaagtac
cagtgtcatgttgactgggctagaagcctaatgcgtaaacaaggacttcgtaaatggtca
atcgacagcattcttgaggatttcaccaaacccctcgacttaccttcgcagtgcgacaat
gaagatgttgaagtagacaagtgcaaatttgagtctgactcagaatttacaaattttcag
gatgaggtcaaatatttggcaatctcctcccttgataatgccgatccacagacgctgcct
cctgacagtccgagcaagagcccagtcgcaaggaagggctgcttagaaggggatgctgct
tatgaccccttagccaagtatggcagtgatacagtagaaacatcagacaacaaagaatta
gctacaatacattgtcatagacatgatgacttaattttgcattgtggttgtaatatcagt
cagagtcctaaacaagaccatccgggttcaatcaaccagcaggaacatgaacatgaatat
gttttagtgccagaagaggaaatgctgttttgcagtgatggcgaagaaaaggagaaagag
attaaaaaagaaaaattggtttgtcgaagaaatccttttcagatttttgaatatttgcaa
ctcagcttggaggaggctttctttctggtctacgctttggggtgtttaaatatcacttat
aatgaggagcctttacccatcctgaagctatgggaagtgttcagcgatgtgcagcccagt
ttcagatcaacatatatggcttaccactacttcaggagcaaaggatgggtgcccaaagta
ggactgaagtatggcactgatctcttgctgtatcggaaaggccccgctttttaccatgca
agctattctgtaatcatcgagcttgttgaccaccagtttcatggttctgcacgaagacca
tttacatggaagtcactagctggcttgaatcgaacaactgtgaatgtttcaaaggagctg
ttattttgctatcttatcaaaccacctgacatgacggaagaggagatgtgttccccggag
tgcctgaaacgaatacaagttcaggaattaattgtaaaccgttgggtctcatcacgggag
cgctctgaacaagatgacctttga
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