Pleurodeles waltl (Iberian ribbed newt): 138259306
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Entry
138259306 CDS
T10800
Symbol
SAMD4B
Name
(RefSeq) protein Smaug homolog 2 isoform X1
KO
K27396
protein Smaug
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
138259306 (SAMD4B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138259306
NCBI-ProteinID:
XP_069063026
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Position
9:complement(348836694..349707522)
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AA seq
701 aa
AA seq
DB search
MMFRDQVSKLSDWFKGWNECEQTVALLSLLKRITRTQARFLQLCLEHSLADCTEIHILES
EANSAALISQWQQESKEKVISLLLSHLPLLQPGNTEAKSEYMKLLQKVLGYSIESNLFTE
ESRQLLSYALIHPATTLEDRNSLALWLNHLDERLSSNYMSQSRSRTDSIYHPRQGSDEWQ
SDTSLGEAVHSWQEKLPRENGHLSFHSSMSVPTTINSVGSSTNAVLSCQIHPSPLKRSMS
LIPTSQQVSSDWMGADELGARSAFISSDHAPLSPQSSVASSGSEQTDEQGRNTFQEEGSG
MRDVPSWLKSLRLHKYASLFSQMTYEEMMTLTEKHLESQVSQDSLGRHSINQHNVTKGAR
HKIALSIQKLRERQSVLKSLEKDILEGGNLRNAFQELQQIIATPIKYYSPSQMAQKDGQG
SECQPPAGSRARQDKASSEPEEKDTAADRFQSPHAPSLDGESAAAPIAEGDIPGQLTRVM
GKVCTQLLVSRPDEENITCYLQLIEKCLTHEAFTETQKKRLLSWKQQVLKLLRTLPRKAM
LEMQGYQQQKGWSFGSNSLPIAGSVGVAVARRGQRQFQMPPRAMPPNRLGLLSPSGIGGV
SPRHSLTNPAVGSQGRQNLWFANPGGSNSMPSQSRSSVQRTHSLPVHTSPQAILMFPPEC
QAPGTDLEINPTLESLCLSMTEHALGGNLERPGGPEDYFLQ
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgtgatcaggtgagcaagctatcagactggtttaaaggctggaatgagtgt
gagcaaacagtagcgttgctgtccctcctcaagcgcatcacccggactcaagctcgcttc
ttgcagctgtgcctggagcattcactggctgattgcacggaaattcacattcttgagtca
gaggcgaacagtgccgccctaataagtcaatggcagcaagaatcgaaggaaaaggtgatc
tcccttctactgtcacacctgccattgcttcagcctggaaacacagaagccaagtcagag
tacatgaaactgctgcagaaggtgcttgggtactccatcgagagcaacctcttcacagag
gaaagccggcagctgctgtcatatgccctaatccaccctgcaaccactttagaagaccgc
aactccttggctctctggctcaaccacctagatgaacgactgtccagcaattacatgagt
cagagcaggagtagaacggactcaatttatcacccccgtcaaggttctgacgaatggcaa
agtgacaccagccttggagaggctgtacacagctggcaggaaaagcttccccgggaaaat
ggacacttgtcatttcattcatctatgtctgtgccaactaccatcaacagtgtgggcagc
agcaccaatgcagttctttcctgccaaatccaccccagcccactgaagcgctccatgtca
ctgatccccacgagtcagcaggtctccagtgactggatgggagcagatgagctgggtgcc
agatctgcttttatttcctccgaccatgcacccttatcccctcagagcagcgtggcatca
tctggcagtgagcagactgatgaacaaggtcgcaatacatttcaagaggaaggaagtggc
atgagagatgttccctcatggctgaagagcctgcgtttgcacaagtatgcctctctcttc
tcccagatgacgtacgaagaaatgatgactcttacggagaagcacctggagtctcaggtg
agccaggattcacttggaagacacagcattaaccaacataatgtaaccaagggagcccgg
cataaaatagctttaagcattcagaagctgcgtgagaggcagagtgtgctgaagtccctg
gagaaggatattttggaaggtgggaacctgagaaatgcctttcaggagttgcagcagatc
attgctactcccataaagtactacagtccctcacagatggcgcagaaagatggtcaaggc
tctgaatgccagccccctgctgggtcaagggcaaggcaagataaagcaagcagtgagcca
gaggagaaagacacagctgctgaccgtttccagtccccccatgcaccttctctggatggt
gaatctgcagcggcacccatcgctgaaggagacatcccagggcagctcaccagagtgatg
ggtaaagtgtgtacccaactcttggtgtctcgaccagatgaggagaacataacatgttac
ctgcaactgattgagaagtgcctgacacatgaggcgttcacagaaacccagaagaagaga
ttgctctcgtggaagcagcaggtgctgaagttactgcgaacgttgccccgtaaggcgatg
ctggaaatgcaggggtaccaacagcagaaggggtggtcttttggctcaaactcactcccc
atagctggatctgtgggggtggcagttgctaggaggggccagcgacagttccagatgcct
cctagagccatgcctcctaaccgattggggttgctgagcccgtccgggattggaggagtg
tctccccggcactcactcacaaacccagcagtggggagccagggacgacagaacctctgg
tttgccaaccctggaggcagtaacagcatgcctagccagagccgcagctcagttcagcga
acacattctttacccgtccacacatcaccacaggccatcctcatgttcccaccagaatgc
caagctcctggaacagatcttgagatcaaccccacgctggaatctctctgcctcagcatg
acggagcacgcccttggaggaaacctagagagacctggaggtccagaagattattttctt
caatag
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