Pleurodeles waltl (Iberian ribbed newt): 138261291
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Entry
138261291 CDS
T10800
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03440
Homologous recombination
pwl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
138261291 (TOP3A)
03460 Fanconi anemia pathway
138261291 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pwl03032
]
138261291 (TOP3A)
03400 DNA repair and recombination proteins [BR:
pwl03400
]
138261291 (TOP3A)
Enzymes [BR:
pwl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
138261291 (TOP3A)
DNA replication proteins [BR:
pwl03032
]
Eukaryotic type
DNA Topoisomerases
138261291 (TOP3A)
DNA repair and recombination proteins [BR:
pwl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
138261291 (TOP3A)
FA (Fanconi anemia) pathway
138261291 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Lar_restr_allev
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
138261291
NCBI-ProteinID:
XP_069066205
LinkDB
All DBs
Position
10:complement(159820286..160047102)
Genome browser
AA seq
1036 aa
AA seq
DB search
MIFQPTILASYGFKILSKCSSRFCQSSAMLQSRRVQIRKVLCVAEKNDAAKGIADIMSSG
GMRRREGFSKFNKIYEYEYNLLGQNVTVSMTSVSGHLLALDFTGSLKNWRSCNPVFLFEA
EVEKYCPDNFVDIKRTLEKEARQCQALVIWTDCDREGENIGFEVIQVCKAVKQNLVVLRA
RFSEITPRSIRAACENLIEPDQNVSDAVDVRQELDLRIGAAFTRFQTLRLQKIFPNVLSN
QLISYGSCQFPTLGFVVERFKAIQAFVPETFYKIKVTHFYEDMTVDFSWKRNRLFHHTAC
LVLYQICMENPVATVVEVGSKPKSKWRPVALDTVELEKLASRKLKISAKETMKIAEKLYT
QGFISYPRTETNIFPQDLNLTPLVQQQTPDPQWGAFAQGILDRGGPTPRNGNKSDQAHPP
IHPTKYTHTLQGNDQRIYEFIVRHFLACCSQDAQGQETTVEIDIAAERFVAHGLMIIARN
YLDVYPYDKWNAKVIPVYEMGSKFQPTTIEMVDGETSPPQLLTEADLIALMEKHGIGTDA
THADHIETIKSRMYVGLTPEQRFLPGELGMGLVEGYDSMGYEMSKPDLRAELEADLKLIS
EGKKDKFVVLRQQIQKYKQVFIEAVAKANKLDDALSQYFGEAVQSAPQEDLFPETPLPIR
KCPHCGKDMVLKTKKDGGFFISCLGYPNCKSAIWFPDSVLEVSRDDSVCTVCQPHPVHRL
KLKFKRGSIPLVMPLEFVGCIGGCDEMLREILDLKYLQAPSRVLQPNNRLNAHVQTSNPR
SRTSNFESSQQRPQAARSVKPSKAPAAVQAPRVTPQFPTSDDGNAVVCNCGQEAVLLTVR
KEGPNQGRQFYKCNGSTCSFFLWSDQQADGGAGGAPNRSFGTTSNSAAGPSSQFTARGQA
SHFPTGGPGAQFPTGGPSGGGRGNGWTTNDRHSGGGDEVICKCNQPAVTRTVQKDGPNKG
RQFHTCQNPREQQCGFFQWADENAPPGQAGASNRGPGTKFKRDSSSTDKEPSTKKPRTCG
ICHQPGHTRIKCPQNR
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgatcttccagcccacgattttggcctcctatgggttcaaaattttatctaagtgtagt
agtaggttctgtcagtcctccgccatgttgcagtctcgcagagttcagattcgtaaagtt
ctctgcgtggcagagaaaaacgatgctgcgaaaggaattgccgacatcatgtccagtggc
ggaatgagacggagagaaggtttctcaaaattcaacaagatctatgaatatgaatacaac
ttgcttggacagaatgttactgtttccatgacctctgtttctggacatttgctggctctg
gattttactggatcactgaaaaattggcgcagctgtaacccagtgtttctgtttgaagct
gaagtggagaaatactgtccggacaactttgtggatattaagaggacactcgaaaaggag
gcacgacaatgtcaagccctggtcatttggacggattgcgatcgggagggggagaacatt
ggcttcgaggtcatccaagtttgtaaagcagtgaaacagaacctggtggtactcagagcc
cgtttctccgagataactcctcgctccatccgggcagcctgcgagaacctcattgagcct
gatcagaatgtcagcgatgctgtggatgtgcgtcaggagctggacctccggataggtgcc
gccttcactagatttcagacactgcggctccagaagatcttccctaacgtcttgtctaac
cagctgatcagctatggtagttgccagttcccaaccttgggttttgttgtggagcgattt
aaagccatccaagcctttgttccagaaacgttctacaagattaaagtaactcatttttat
gaagacatgactgttgacttcagctggaagaggaatcgtctgttccaccacacagcctgt
cttgtcctctaccagatctgcatggagaatccagttgccactgttgtggaggttgggagc
aagccaaaaagtaaatggaggccagtagcactggacacggtggagctggaaaaactggcc
tcccgaaagctgaagatcagtgctaaggagacaatgaagattgctgagaagttgtacaca
caagggttcatcagctaccctcgaacagaaaccaacattttccctcaggacctgaatctg
actcccttggtacaacagcagaccccggatccgcagtggggggcatttgctcagggaatt
cttgacagaggtgggccaacaccgcgaaacggtaacaaaagtgatcaggcccacccccca
atccaccctaccaagtacacacacactctgcaggggaacgatcagaggatatacgagttc
attgttcgccatttcctggcctgctgctcacaggatgctcaagggcaggagaccacagtt
gagattgatattgcagcagaacgctttgttgctcatggactgatgatcattgccaggaac
tatctggacgtctatccctatgacaagtggaacgccaaggtgatcccagtttatgaaatg
ggctcaaaattccagcccaccacaatcgagatggtggatggtgagacaagtccaccccag
ctcttgactgaagctgatctcattgcactcatggaaaagcatggcattggaactgatgct
actcacgccgatcacattgagaccatcaaatcccgtatgtatgtaggtctcacgcctgag
cagagatttcttccaggggagctaggcatgggcctagtggaaggttatgactctatgggt
tatgagatgtctaagcctgatttaagagctgaactggaagctgacttgaagcttattagc
gaagggaagaaagataagtttgttgtcttgaggcagcagatccaaaagtacaagcaggtc
ttcattgaggcagtggccaaagccaacaaattagatgatgcactatcacagtactttggg
gaagctgtccagtctgcacctcaagaggatctgtttcccgagactccacttcctatccga
aagtgtccgcactgtggcaaggacatggtcctgaaaaccaagaaggatggtgggttcttc
atatcctgccttggctacccaaactgcaaaagtgctatctggtttcctgattcggttttg
gaggtgagccgggatgacagtgtgtgcactgtttgccagccgcatcctgttcacaggtta
aagctgaagtttaagcgtggcagcatacctcttgtcatgcctttggagtttgttggttgc
attggaggatgtgacgagatgctgagagagatccttgacctgaagtatctgcaggcaccc
agtagggtgctccagcctaataatcgtctaaacgcccatgtgcaaacgagtaaccctcgt
tccagaacatccaactttgaaagtagccagcaacggccacaggctgcgaggtcagtcaag
cctagtaaagcacctgctgcagttcaagctcccagagtcactccacagttcccaaccagt
gatgacggaaatgcagtggtgtgtaactgtggacaggaggcagttttactcacagttcgc
aaagaagggcctaaccaaggcagacagttttataagtgtaatggttcaacctgtagtttc
ttcctgtggtctgatcaacaggcagatggtggggctggcggtgcccccaatcgaagtttt
ggaacaacttctaactcggctgcagggccatcatctcaatttacggccaggggacaagca
tctcacttccccacaggagggccaggagctcaattccccactggcggaccctctggtggt
gggagaggaaatggctggacgacaaatgacagacattcaggcgggggagatgaagtcatt
tgcaagtgtaatcaacctgcagtcacccgaacagttcaaaaggatgggcccaacaagggt
cgccagttccacacgtgccagaatcctagagagcagcagtgcggtttctttcagtgggct
gatgagaatgcaccaccagggcaagcgggtgcatcaaatagaggacctggaacaaaattc
aagagggatagcagcagcacagacaaagaaccaagtaccaagaagccccgcacatgtgga
atttgccatcagcctggtcacacacggataaagtgcccacagaaccgatga
DBGET
integrated database retrieval system
