Pleurodeles waltl (Iberian ribbed newt): 138285384
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Entry
138285384 CDS
T10800
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pwl04040
]
138285384
Ion channels [BR:
pwl04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
138285384
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
Motif
Other DBs
NCBI-GeneID:
138285384
NCBI-ProteinID:
XP_069081353
LinkDB
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Position
3_1:complement(1607132270..1607828484)
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AA seq
2013 aa
AA seq
DB search
MEPPLHIPPGPDSLRFFTRESLQAIERRIAEEKAKKPPKQDRRDDNDDDGPKPNSDLEAG
RSLPFIYGDLPSEMVSTPLEDLDPYYSNQKTFIVLNRGKAIFRFSATSALYMLTPFNPLR
RVAIKVLVHSLFSMLIMFTILTNCVFMTLSNPPEWTKNVEYTFTGIYTFESLIKILARGF
CLENFTFLRDPWNWLDFSVISMAYLTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVG
ALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLQWPPDDSATELNITTVFNSS
AGVNGTYYNVTETVFNWEEYIADYSHYYRLEGQRDALLCGNSTDAGQCPGGYICVKANRN
PNYGYTSFDTFSWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNL
ILAVVAMAYDEQNQATLDEAEQKEAEFQQMMEALKKHQDNLQAAAAAASSDAMDDGRGYS
EVYGGTLSESSSEASMLSSKSAKERRNRKKKRKQKESEGDEKGDNEKFHQSESDSSFKRK
GFRLTYEKKYTSPHQSMLSIRDSLFFPRRNSRASLFSNRGRGKDVGSENDFADDEHSTFE
DNESRRGSLFVPHGHRERRNSNLSQASKVSRILPVFPVNGKMHSTVDCNGVVSLVGGPSA
PTSPVGLLLPEVIIDKPPSDDNAGTETEMKKRRLSSYHVSMDLLEDPMLRQRALSAASIL
SNTMEELEESREKCPPCWNKFANTFLIWDCSEKWLKIKEIVNIIVMDPFVDLGITICIVL
NTLFMAMEHYPMTEHFSNVLTVGNLVFTGIFTAEMVFKLIALDPYYYFQVGWNIFDGIIV
SLSLMELGLQDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAII
VFIFAVVGMQLFGKSYKECVCKIAEDCELPRWHMNDFFHSFLIVFRVLCGEWIETMWDCM
EVAGQSMCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLTATEDDNEMNNLQIAVARMH
IGIAYVKRSVREIFENAVIKKKKTLDELKPLEEMQNQKDGCISNHTTVELCKDFEYLKDG
NATTGTSGIGSSVDKYIIDESDYMSFIHNPSLTVTVPIAVGESDFENLNTEEFSSESDIE
ESKENIALSSPSEGSTVDIRPIAEGVPEVIETQEPEEEPEACFTEGCVAKYKCCQVSVES
GRWKQWWNLRKTCFKIVEHNWFETFIIFMILMSSGALAFEDIYIEQRKTIKIVLEYADKV
FTYIFILEMLLKWVAYGFQKYFTNAWCWLDFLIVDISIISLLAVAFGYDQLAAIKSMRTL
RALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNMFSGKYYHCVN
TTTDEMFLETEVNNKSECEALIYQNKSARWRNVKVNFDNVGFGYLALLQVATFKGWMEIM
YAAVDSRKVEEQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDI
FMTEEQKKYYNAMKKLGSKKPQKPVPRPQNKFQGAVFDFATQQAFDITIMVLICLNMVTM
MIETDDQSKEMENNLYNINMVFIILFTGECVLKLISLRHYYFTIGWNVFDFVVVILSIVG
MFLSEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLF
LVMFIYAIFGMSNFAYVKREGGIDDMYNFETFGNSMICLFMITTSAGWDGLLAPILNSGP
PDCNPTVSHPGSSTVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESA
EPLGEDDFEMFYEVWEKFDPSASQFIEFRNLTNFADALDPPLRIAKPNTVQLIAMDMPMV
SGDRIHCLDILFAFTKRVLGEGDEMDALRQPMEERFMASNPSKVSYEPITSTLRRKQEEL
SAIVIQRCYRRYLLKKTVKRASFMYSKDKSKGGDSSLIKKDLLSDRLNGNSTTEKMDMTP
STASPPSYDSVTKPDKEKHESDRAEREKQRQRR
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atggagccgcctctgcatataccaccaggacctgacagcctacgcttcttcaccagggaa
tctctccaagctattgaaaggcgcattgctgaagaaaaggccaagaagccacccaaacaa
gatcgtagagatgacaatgatgacgatggcccaaagccaaatagtgacttggaagcaggg
agatcactgccatttatttatggggacctcccttcagaaatggtttccacaccattggag
gacctggacccatactacagcaatcagaaaacttttatagtattaaacagagggaaggca
atcttccgcttcagtgccacttctgccttgtatatgttaactcctttcaatcctctcaga
agagtagctattaaagttttggttcattcattattcagcatgctcatcatgttcacaatt
ttaaccaactgtgtgtttatgaccttgagtaacccaccggaatggaccaagaatgtagag
tacacattcacaggaatttatacttttgagtctcttataaaaattcttgcaagaggtttc
tgtttagaaaactttactttcctccgagatccatggaactggttggatttcagtgtcatt
tcgatggcatatttgacagagtttgtggacttgggcaatgtctcagcgttgagaacattc
agagttctccgagcattgaaaacaatatcagtcattccaggtttgaagactatcgtgggg
gccttgattcagtcagtaaagaagctttccgatgtcatgattctgactgtgttttgtctc
agtgtatttgcactaatagggctgcagttgttcatgggcaacttgaggcacaaatgtctg
cagtggccgccagacgattctgctactgagctaaatattactaccgtctttaatagctca
gcgggcgtcaatggaacatattataatgtaacagaaacagtctttaactgggaagagtac
atcgccgactacagtcattactatcgtttggaaggtcagagggacgcgctgctgtgtggt
aatagtactgatgcggggcagtgcccaggagggtatatatgtgtgaaggcgaacagaaat
cccaactatggctatacaagcttcgacaccttcagctgggcttttttgtcattgtttcgt
ttaatgactcaggactactgggaaaatctttatcaactgactcttcgtgctgctggcaaa
acctacatgatattttttgttctggtgattttccttggttccttttacctggtgaacctg
atcttggctgtggttgccatggcctacgatgagcaaaatcaggctaccttagatgaagct
gagcagaaggaggcagaattccaacaaatgatggaagcacttaaaaaacatcaggataac
ttgcaggcagcggcagcagcagcgtcatcagatgctatggatgacggtagagggtacagt
gaagtctacggtggaacactgtcagagagttcttcagaagcatcaatgctgagctcgaaa
agtgctaaggaaagaagaaatagaaagaagaaacggaaacagaaagagtctgaaggagac
gaaaaaggggataatgagaaattccaccaatcagaatctgacagcagtttcaaaagaaaa
ggtttcagactgacatacgaaaagaagtacacttctccccatcagtccatgctgagcata
cgtgattctttgtttttccctcggcgcaatagcagagccagccttttcagcaacagagga
cgtggaaaagacgttggctcagaaaatgactttgctgatgatgagcacagcacttttgag
gacaatgaaagcagacggggatcgctctttgtgcctcatggacatagagaacggcgcaac
agtaaccttagccaggccagcaaggtgtccaggatcctgccagtttttccagtgaatggg
aaaatgcacagcacagtggattgcaacggagtggtttccttggtcggtggtccatcagct
cccacatcgcctgttggattacttctgccagaggtgataatagataaaccaccctctgat
gacaatgctggcacggaaacagaaatgaagaagcggaggctgagctcttaccatgtgtca
atggatttgttggaagatcctatgcttcggcagcgagctctgagtgcagccagcattcta
tcgaacacaatggaagaacttgaagaatccagagaaaaatgccctccatgctggaataaa
tttgctaatacgttcctcatttgggactgctctgaaaaatggctgaaaataaaagaaatt
gtcaatatcattgtgatggatccatttgtggatctaggaattactatatgcattgttttg
aataccttgttcatggccatggaacactatccaatgactgaacatttcagcaatgtacta
acagttggaaacctggttttcacgggaatctttacagcagaaatggttttcaagctaatc
gccctcgacccttattactatttccaagtcgggtggaatatttttgatggaatcattgtc
agcctcagcttgatggagttgggtcttcaagatgtggaaggactttctgttctaagatct
ttccgtttgcttcgcgtttttaagctggcaaaatcttggccaaccctcaacatgctgatc
aagattattggtaactctgtgggcgctttgggaaatctaacattggtgctggccatcatt
gtcttcattttcgctgttgttggaatgcagctatttggtaaaagctataaggaatgtgtc
tgcaagattgctgaagactgtgaacttccacgctggcacatgaatgacttcttccactcc
ttcttgattgtgttccgggtactgtgtggagaatggatagagaccatgtgggactgcatg
gaggttgcaggacaatcgatgtgcctcactgttttcatgatggtgatggtgataggaaac
cttgtggtgttgaacctattccttgccttgctactgagctcatttagttcagacaacctt
acagcaacagaagatgataacgaaatgaacaatctccagattgcagtggcaagaatgcac
attggaattgcttatgtgaaaagaagtgtgagggaaatttttgaaaacgctgttattaag
aagaaaaaaactttagatgagctcaaaccacttgaggagatgcagaaccagaaggatgga
tgcatttccaaccacactacagtggaactctgcaaagatttcgaatatcttaaagacggg
aatgcaaccactggcactagtggaatagggagtagtgtggacaagtacatcatcgatgag
agcgattacatgtcctttatacataacccgagcctcactgttactgtgcctattgctgtg
ggagaatcagattttgaaaacctaaataccgaagaatttagcagtgaatcagacattgaa
gaaagcaaagagaatatagccttgtctagcccatcagaaggaagcactgttgacataagg
ccaatagctgaaggggtaccggaagtgattgaaactcaagaaccagaagaagaaccagaa
gcctgctttacagaaggttgtgtcgcaaagtacaaatgctgtcaagttagcgtggaaagt
ggaagatggaaacagtggtggaatctgagaaaaacatgtttcaagatagttgagcacaac
tggtttgaaaccttcataatctttatgatcctcatgagcagtggtgcactggcatttgaa
gacatatacattgaacaacggaagacaattaagattgtgcttgaatatgcagacaaagtt
ttcacttacatcttcatactggaaatgcttctgaaatgggtggcatatggattccaaaag
tatttcacaaatgcctggtgctggctcgacttcctgattgttgatatttctatcatttcc
cttttggctgtggccttcgggtacgaccaactggccgctattaagtccatgaggacgttg
agggcactgaggcctctgcgagcattatcaagatttgaaggcatgagggtggttgtgaat
gcccttgtaggagcaatcccatccattatgaacgttcttctggtgtgtctcatattttgg
ctaattttcagtatcatgggagtaaacatgttctctggcaagtactatcactgtgtgaac
accacgacagacgaaatgttcctagaaactgaagtcaataataagtctgaatgtgaggcc
ctcatataccagaataagtcagctcgatggagaaatgtcaaagtgaactttgataatgta
ggatttggatatcttgctttgcttcaggtggcgactttcaaaggatggatggaaattatg
tatgcagcagttgattcacggaaggtggaggaacagccgaaatatgaagacaatctctac
atgtatctgtattttgtcatcttcatcatctttggatcctttttcaccctcaatctgttc
attggtgtcatcattgataacttcaaccagcagaaaaagaagtttggaggtcaagacatc
ttcatgacagaagaacaaaaaaagtattataatgcaatgaaaaagctgggttccaagaaa
ccacagaaaccagtgccaaggccacagaataaatttcaaggtgctgtctttgattttgcg
acacagcaagcatttgacatcaccatcatggttctgatttgcctcaacatggtaacgatg
atgatagaaacggatgaccagagtaaagaaatggagaacaatttatacaatattaacatg
gtcttcattatcctttttactggagaatgtgtgctgaagttgatctctctacgccattat
tacttcaccattggttggaatgtttttgattttgtggttgtaattctttccatcgtaggt
atgtttctatctgaaattattgaaaaatactttgtttcaccaaccttgttcagagtgata
cgacttgccaggattggtagaattttgcgacttattaaaggtgccaagggaatacgcaca
ctcctctttgctttgatgatgtcacttcctgctttgtttaacattggcctattacttttc
ctggtgatgttcatctatgcgatatttggaatgtccaactttgcctatgttaagagggaa
ggaggaatcgatgacatgtacaactttgaaacttttggcaatagtatgatctgtctgttt
atgatcaccacatctgctggctgggatggcttgttggccccaattctcaacagtgggcca
ccagactgcaacccaacagtgtctcaccctggaagtagcactgtaaaaggagactgtgga
aatccttcagttgggattttcttctttgtcagttacataataatatcatttttagtagtt
gtaaacatgtacattgctgttatattggaaaacttcagtgttgctactgaagaaagtgct
gaacccttgggtgaggatgattttgagatgttttacgaggtctgggaaaagtttgatcca
agtgcaagtcagttcatagaatttcgtaatttgactaattttgcagatgcattggatcct
cctctacgcatagcaaagccaaacacagtgcagctcatagcgatggacatgcccatggta
agtggtgacagaattcattgccttgacatcctatttgcttttacaaagcgtgttttgggt
gaaggtgatgaaatggatgctctacgtcaaccaatggaagaacgatttatggcatccaat
ccttcaaaagtctcctatgaaccaattacatcgactctacgacggaaacaggaggagcta
tctgctattgttattcagcgctgctacagacgctaccttttgaagaaaacagtcaagcga
gcttcatttatgtacagcaaggataaaagcaaaggtggggacagctcacttataaaaaag
gatcttcttagtgacaggctaaatggaaactctacaacagagaaaatggacatgactcct
tccactgcatcgcctccttcctatgacagtgtaacaaagccagacaaagagaagcacgaa
tcagacagagctgaaagagaaaaacaaaggcagagacgttag
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