Pleurodeles waltl (Iberian ribbed newt): 138285853
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Entry
138285853 CDS
T10800
Name
(RefSeq) polyubiquitin-C-like
KO
K08770
ubiquitin C
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03320
PPAR signaling pathway
pwl04120
Ubiquitin mediated proteolysis
pwl04137
Mitophagy - animal
pwl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138285853
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138285853
04137 Mitophagy - animal
138285853
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
138285853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138285853
Ubiquitin system [BR:
pwl04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
138285853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
138285853
NCBI-ProteinID:
XP_069082428
LinkDB
All DBs
Position
3_1:1960877818..1960883187
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AA seq
1065 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD
KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGF
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcttcgtcaaaacgttgactgggaagaccatcaccctagaggtggaaccaagt
gacactatagagaatgtcaaagcaaagatccaagacaaagaaggcattcccccagaccag
cagagattgatctttgcaggcaaacagttggaagatggtcgcactctgtccgactacaat
atccagaaagaatccacccttcatcttgtcctgcgtttgagaggaggtatgcaaatattt
gtgaaaaccttgactggcaagaccataacccttgaggttgaacccagtgacactatagag
aatgtcaaagcaaagatccaagacaaagaaggcattcctccagaccagcagaggttgatc
tttgcaggcaaacagttggaagatggtcgcactctgtcagactacaatatccagaaagaa
tccacccttcatcttgtcctgcgtttgagaggaggtatgcaaatctttgtgaaaaccttg
actggcaagaccataacccttgaggttgaacccagtgacactatagagaatgtaaaagca
aagatccaagacaaagaaggcattcctccagaccagcagaggttgatctttgcaggcaaa
cagttggaagatggtcgcactctgtccgactacaatatccagaaagaatccacccttcat
cttgtcctgcgtctgaggggtggaatgcagatctttgtaaaaaccctcactggtaaaaca
ataacccttgaggtggaacccagtgacactatagagaatgtcaaagcaaagatccaagac
aaagaaggcattcctccagaccagcagaggttgatctttgcaggcaaacagttggaagat
ggtcgcactctgtcagactacaatatccagaaagaatccacccttcatcttgtcctgcgt
ttgagaggaggtatgcaaatctttgtgaaaaccttgactggcaagaccatcacactggaa
gtggaacctagtgacactatagagaatgtcaaagcaaagatccaagacaaagaaggtatt
cctccagaccagcaaagattgatctttgcaggcaaacagttggaagatggtcgcactctg
tccgactacaatatccagaaagaatccacccttcatcttgtcctgcgtctgaggggtgga
atgcagatctttgtaaaaaccctcactggtaaaacaataacccttgaggtggaacccagt
gacactatagagaatgtcaaagcaaagatccaagacaaagaaggcattcctccagaccag
cagaggttgatctttgcaggcaaacagttggaagatggtcgcactctgtcagactacaat
atccagaaagaatccacccttcatcttgtcctgcgtttgagaggaggtatgcaaatcttt
gtgaaaaccttgactggcaagaccatcacactggaagtggaacctagtgacactattgag
aacgtaaaagcaaagatccaagacaaagaaggcattcctccagaccagcagaggttgatc
tttgcaggcaaacagttggaagatggtcgcactctgtcagactacaatatccagaaagaa
tccacccttcatcttgtcctgcgtttgagaggaggtatgcaaatctttgtgaaaaccttg
actggcaagaccatcacactggaagtggaacctagtgacactattgagaacgtaaaagca
aagatccaagacaaagaaggcattcctccagaccagcagaggttgatctttgcaggcaaa
cagttggaagatggtcgcactctgtcagactacaatatccagaaagaatccacccttcat
cttgtcctgcgtttgagaggaggtatgcaaatctttgtgaaaaccttgactggcaagacc
atcacactggaagtggaacctagtgacactattgagaatgtcaaagcaaagatccaagac
aaagaaggcattcctccagaccagcagaggttgatctttgcaggcaaacagttggaagat
ggtcgcactctgtcagactacaatatccagaaagaatccacccttcatcttgtcctgcgt
ttgagaggaggtatgcaaatctttgtgaaaaccttgactggcaagaccatcacactggaa
gtggaacctagtgacactattgagaacgtaaaagcaaagatccaagacaaagaaggcatt
cccccagaccagcaaagattgatctttgcaggcaaacagttggaagatggtcgcactctg
tcagactacaatatccagaaagaatccacccttcatcttgtcctgcgtttgagaggaggt
atgcaaatatttgtgaaaaccttgactggcaagaccataacccttgaggttgaacccagt
gacactatagagaatgtcaaagcaaagatccaagacaaagaaggcattcctccagaccag
caaagattgatctttgcaggcaaacagttggaagatggtcgcactctgtctgactataat
atccagaaagaatccacccttcatcttgtcctgcgtttgagaggaggtatgcaaatattt
gtgaaaaccttgactggcaagaccataacccttgaggttgaacccagtgacactatagag
aatgtcaaagcaaagatccaagacaaagaaggcattcctccagaccagcaaagattgatc
tttgcaggcaaacagttggaagatggtcgcactctgtccgactataatatccagaaagaa
tccacccttcatcttgtcctgcgtttgagaggaggtatgcaaatatttgtgaaaaccttg
actggcaagaccataacccttgaggttgaacccagtgacactatagagaatgtcaaagca
aagatccaagacaaagaaggcatccctccagaccagcagaggttgatctttgcaggcaaa
cagttggaagatggtcgcactctgtccgactacaatatccagaaagaatccacccttcat
cttgtcctgcgtttgagaggaggtatgcaaatatttgtgaaaaccttgactggcaagacc
ataacccttgaggttgaacccagtgacactatagagaatgtcaaagcaaagatccaagac
aaagaaggtattcctccagaccagcaaagattgatctttgccggcaaacagttggaagat
ggtcgcacattatcagactacaacattcagaaagaatctacccttcatcttgttctccgt
ctcaggggtggcttttaa
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