KEGG   Pleurodeles waltl (Iberian ribbed newt): 138288839
Entry
138288839         CDS       T10800                                 
Symbol
KDM4C
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
pwl  Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:pwl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pwl03036]
    138288839 (KDM4C)
Enzymes [BR:pwl01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     138288839 (KDM4C)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     138288839 (KDM4C)
Chromosome and associated proteins [BR:pwl03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    138288839 (KDM4C)
SSDB
Motif
Pfam: JmjC Tudor_2 zf-HC5HC2H_2 zf-HC5HC2H JmjN PHD_2 LBR_tudor Tudor_5
Other DBs
NCBI-GeneID: 138288839
NCBI-ProteinID: XP_069086229
LinkDB
Position
1_1:907681250..909077105
AA seq 1084 aa
MGDSDSDSPPNASCKIMTFRPTMEEFEDFNKYLVYMESQGAHRAGLAKVIPPKGWKPKKH
YDDIDDLVIPAPIQQMVTGQSGLFTQYNIQKKPLTVQEFRRMANSDKYCTPRYMDYEDLE
RKYWKNLTFVAPIYGADVNGSLYDEDINEWNISHLNTILDVVGEDCGISIEGVNTPYLYF
GMWKTTFAWHTEDMDLYSINYLHFGEPKSWYTVPPEHGKRLERLAQGFFPNSSQDCEAFL
RHKMTLISPSVLKKYSIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATIRWID
YGKMSKLCSCSNDMVQISMDIFVKKFQPEKYQLWKQGKDVYSIDHTKPTPDTTPELKAWQ
QRRKKIKSRKRLQHTKLQLKKCTTREDKKVSLPVSSAETIPTDSSVGLVIKHEAAEKVNL
ANKNVPPGEQKKRIRVHQKCTTVHTNQISGNTDSRPILSSLLDVEAIKTEERGTSTDLQI
IKTEEQQTAPELHKIKTEENDMEDCNAASSGLAEQSVCMLTQTSWRKLEGEVKTEDESKQ
TVSCQKTNVCILSEAQRLEKEETSSASSEEDSSDLDVTDGDMKAEKGLKEVEKWQTCKSR
RNPLNKPPSSVCFNIQTKCKEEPLDLQIGEEELSETETETEAWAKPLVYLWQKRPCNIIA
EREYNSSVAKMEPYCAICTLLLPYYRSNIYNEEIKLQWESVSNGIFPENRKTKPLIQERC
FAYSGKCHQKQTHLAQENGRSRLLSCAKCCVQVHASCYGVPSCEMLDEWKCNRCRTGEWT
AQCCLCNLRGGALKQTTDKKWAHVMCAVTHPEVRFLNVAERTLIDISRIDQERYKLKCVF
CKQRMATFFKPCVQCSYGLCTTSFHVTCAHAAGMFIKYSEKPPVVYMTCFRHKNNQYMRT
NVDKKAISVDQTVIAKHRNTRYYSCKVISITLQTFYEIVFDDGSFSRDTFPEDIVSRDCL
KQGPPAKGEVVQVKWPDGVLYGAKYLGSNAVQMYQVEFEDGSQIATTREEIYTLEEELPK
RIQSRYSRASDMKFVDTFYGDEIIQGERKRQRVLNGKFKDEFVDNPGYRTFLRSSFLKTC
KEEL
NT seq 3255 nt   +upstreamnt  +downstreamnt
atgggtgactcggactccgacagccctccaaatgcaagctgcaagataatgaccttcagg
cctacgatggaagaattcgaagattttaacaaatatttggtatacatggaatcacaaggt
gcccatcgagcaggacttgcaaaggtgattccaccgaagggatggaagccaaaaaagcat
tatgatgacatagatgaccttgtgattcctgctccgatccagcagatggtaacaggacag
tctggacttttcactcagtacaacatacagaagaaaccattgaccgtccaagagttccgt
aggatggcaaatagtgacaagtattgcaccccaagatacatggattatgaagatttggaa
cgcaaatactggaagaatttaacatttgtagctccaatatatggggcagatgtgaatgga
agcctgtacgatgaagacattaatgaatggaacatttctcacctaaacacgattttggac
gtggttggggaagactgtggcatttccattgagggcgtgaatactccatatctatatttt
gggatgtggaagacgacttttgcttggcacactgaagacatggatctttacagcattaac
taccttcactttggagagcccaagtcatggtatactgtccccccagaacatggaaaacgg
ctagaacgacttgcacaaggtttctttccaaatagttcacaggactgtgaagcctttctc
cgccacaagatgacactcatatcaccttcagtactaaagaagtattctattccatttgac
aaggttactcaggaggcaggcgagttcatgatcacattcccatatggctaccatgcggga
tttaaccatgggttcaactgtgctgagtcaacaaattttgcgacaataagatggattgat
tatggaaaaatgtctaaattgtgttcttgcagtaatgatatggtacagatatcaatggat
atcttcgtgaagaaattccagcctgaaaaatatcaactctggaaacaagggaaagatgtg
tacagtatcgatcacacaaagcctacgccagacacaaccccagagttgaaggcgtggcaa
caaaggagaaagaaaataaaatctcgcaagagactgcagcatacaaaattacaattgaaa
aaatgtacaactcgagaagacaagaaagtctctttgccggtttctagtgcagaaactata
cccactgactcttctgtgggcttagtgatcaagcacgaggctgcagagaaagtgaatcta
gccaacaaaaacgtacctcctggggagcaaaaaaaacgtattcgagtacatcagaagtgc
accacagtgcatacaaaccagatctcagggaacactgattctcgacctattctcagcagt
cttcttgatgtagaagcaattaaaaccgaagaaaggggaacatctactgatctccaaata
attaaaaccgaagaacagcaaactgcacccgaactgcacaaaataaaaacggaagagaat
gacatggaagattgcaatgctgcatcctctggtcttgcggaacagtctgtatgcatgctc
acccaaactagttggagaaaactagagggtgaggtcaagactgaggatgaatcaaagcag
actgtgtcctgccagaagactaatgtatgtattctttcggaggcacagcgccttgaaaaa
gaagaaactagtagtgcctcttctgaggaggacagcagcgaccttgatgttaccgatggt
gacatgaaggctgaaaagggcctgaaagaagttgaaaagtggcaaacttgtaagagtcgg
aggaatccattgaataaacccccctccagtgtttgcttcaacatacagacaaaatgtaag
gaagagccacttgacttgcaaataggagaggaagaattgtcagaaactgaaactgaaact
gaagcttgggccaagcctcttgtgtacctttggcagaaaaggccgtgcaacattattgct
gaaagagaatataattcatctgttgccaaaatggaaccatattgcgctatttgtacacta
cttttgccttattacaggtcaaacatctataatgaagaaattaaactgcagtgggagtct
gtatccaatggaatatttccagaaaatcgaaagactaagccgttaattcaagagaggtgt
tttgcttacagtggaaaatgccatcaaaaacaaacacatttagcccaagagaatggaaga
agtcgtttattgtcttgcgcaaagtgttgtgttcaagttcatgcaagttgttatggcgtt
ccttcctgcgaaatgcttgatgaatggaaatgcaaccgttgcagaactggagaatggaca
gcacaatgctgcctctgcaacttgaggggtggagcacttaagcagacaaccgacaaaaag
tgggcgcatgtaatgtgcgcagttacacatccagaagtgcggtttcttaatgttgcagaa
aggactttaatagatattagcagaatagatcaggaaaggtataaattgaagtgtgtattt
tgtaagcaacggatggcaaccttcttcaagccttgtgtccagtgttcctatgggctctgt
actacttccttccatgttacctgtgcccatgctgctggaatgttcataaaatatagcgag
aagcctcctgtggtatacatgacatgtttcagacataaaaacaatcaatatatgcgaacg
aatgtagacaagaaagcgatatctgtggatcagacagtcattgcaaaacacaggaacaca
agatattacagctgcaaagtaataagtataactctccagaccttctatgaaatagttttt
gatgatggttctttcagcagagacactttccctgaagatatcgttagcagagactgccta
aagcaaggtccacctgcaaaaggggaggttgttcaggtgaagtggccagatggagttctg
tatggtgcaaaatatcttggaagcaatgcagttcaaatgtatcaggttgaatttgaagat
ggttctcagattgccaccacaagagaagaaatctatacgctggaagaagagctacctaaa
cgaattcagtcacgttattctagggcctccgacatgaagtttgtggacacattttacgga
gacgaaatcatccagggcgaacgaaagaggcagagagtgctgaatggcaagttcaaggac
gaatttgtggataatcctgggtaccgcacttttttgaggagttcattcctaaaaacttgc
aaggaagaactatga

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