Pleurodeles waltl (Iberian ribbed newt): 138292422
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Entry
138292422 CDS
T10800
Symbol
HNRNPA1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138292422 (HNRNPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138292422 (HNRNPA1)
03041 Spliceosome [BR:
pwl03041
]
138292422 (HNRNPA1)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
138292422 (HNRNPA1)
mRNA cycle factors
Common to processing body (P body) and stress granule
138292422 (HNRNPA1)
Spliceosome [BR:
pwl03041
]
Common components
Common spliceosomal components
hnRNP proteins
138292422 (HNRNPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
138292422
NCBI-ProteinID:
XP_069087107
LinkDB
All DBs
Position
4_2:150479060..150483235
Genome browser
AA seq
376 aa
AA seq
DB search
MSKNESPKEPEQLRKLFIGGLSFETTDESLRNHFEQWGALTDCVVMRDPNTKRSRGFGFV
TYSTAEEVDASMNARPHRVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHH
LRDYFEEYGKIDIIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQEMATASASQRGRGGSGSFGGRGGGYGGSDNFGRGGGGGNFGGRGNSGGGFGGSRGG
GYGGDGYNGFGNEGGYGGSPSYSGGSRGYGGAGGSSSGGGGYGGNPGGGYGGGYDNYNNG
GGGFGGGSGNFGGGGGGNYNDFGSYNNQSSNFGPMKGGNFGGGRSSVPYGGGGGGNKSLA
GEESQRSDRELQVTAV
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaacgagtctcccaaagaaccagaacagcttcgaaagcttttcattggtggc
ttgagctttgaaacaaccgacgagagtcttcgtaatcacttcgagcaatggggtgcacta
actgactgtgtggttatgagagatccgaacacaaaacgctcccgagggtttggatttgta
acgtattctacagcggaagaggtcgatgcttcaatgaatgcaaggcctcacagggtagat
ggacgtgttgtggaaccaaagagagctgtttcccgagaggactcgcaaagaccaggtgcg
cacctaacggtgaagaaaatctttgttggtggcatcaaagaagacacggaagagcaccat
ctgcgcgattactttgaggaatatggcaagattgacataattgaaatcatgacggaccgt
ggtagtggcaagaaaagggggttcgcattcgttacttttgatgaccacgactccgtcgac
aagattgtcattcagaagtaccacactgtgaacggtcacaactgcgaagtacgcaaagcg
ctctccaagcaagaaatggcaaccgcctctgcaagccagagaggtcgtggtggttcagga
agctttggtggaagaggtggcggatacggaggcagtgataactttggccgaggtggtgga
ggcgggaacttcggaggccgtgggaatagcggcggtggctttggtgggagccgaggaggt
ggatatggtggtgatggttacaacggatttggcaatgaaggtggctatggtggaagccct
tcgtactccggtggcagcagaggctatggtggtgctggtggtagtagtagtggcggcgga
ggatatggtggaaacccggggggtggatacggcggtggctatgataattacaacaacggt
ggtggcggatttggcggaggaagcgggaacttcggtggtggcggcggaggaaactacaat
gactttggcagttacaacaaccagtcctccaactttggcccaatgaagggtgggaatttc
ggcggaggaaggagctctgtcccttacggtggcggtggaggaggaaacaaaagcttagca
ggagaggagagccagagaagtgacagggagctacaggttaccgcagtttga
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