Pleurodeles waltl (Iberian ribbed newt): 138301405
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Entry
138301405 CDS
T10800
Symbol
PHF1
Name
(RefSeq) PHD finger protein 1 isoform X1
KO
K11467
PHD finger protein 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
138301405 (PHF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138301405 (PHF1)
03036 Chromosome and associated proteins [BR:
pwl03036
]
138301405 (PHF1)
Transcription factors [BR:
pwl03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
138301405 (PHF1)
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
138301405 (PHF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mtf2_C
Tudor_2
PHD
PHD_ash2p_like
Prok-RING_1
SGF29_Tudor
DUF4537
Motif
Other DBs
NCBI-GeneID:
138301405
NCBI-ProteinID:
XP_069097956
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All DBs
Position
6:complement(1706285152..1706892757)
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AA seq
582 aa
AA seq
DB search
MEDTSSPPLCRSSHTSPKASCSQVKRPRFQTLTRFWEGQDVLARWTDGLLYLGIIKKVDS
EQETCLVRFEDNSQFLVLWKDINPPAVPGKEQVCCACNEQAVSPQNKLVHCGKCKHAYHQ
ECHLPRIVCEAEWPGSSWMCRQCVFAVATKRGGALKKGPYARAMQHMKLVLPYQLKALDW
DPLHQSNQQKCYCYCGGPGEWNMKMLQCCKCNQWFHEACTQCLSKPLLYGDRFYLFECSV
CTRGPESVWRLPLRWVDVAHLVVYHLSICCKKKYFDFEREILAFANENWENLLLGELSDT
PRVERYSQLLNVLNSRKDRFISGKEIKKKKCLFGLHSRVPPPVPQHLQEDTSPESVTEDD
EGPEEFASPACRSSFSGQGGGREHKRLSSRKQKPSPQTMELRSRKERLRLERAVTKHVVQ
NPVSPSQSYTGYSGSYNFRRTGSRCLQSSSPIRMFASFHPSANTSSSLTDSFQNSEEGPD
LRDSSCPAPSYESDISQKEKCRSLPSTPSCRRSPVTHVSAQSADDPPAQSSSSNSTTSSS
SPNYFGAVGRLARGESVRILARRETVDGTIQYLVEWGDGSVL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggaggacacctcatcaccccccttgtgccgcagctcacacaccagccccaaggcatcc
tgcagccaggtgaagcggccccgctttcagaccctgacacgcttctgggaggggcaagat
gtgctggcccgttggacagatggtctgctataccttggtatcatcaaaaaggtggacagc
gagcaggaaacgtgtttagtaagatttgaagataactcacagttccttgtcctctggaag
gacattaaccctcctgctgtgcctgggaaggaacaagtatgctgtgcctgtaatgaacag
gcagtatcccctcagaataaactggtccactgtggaaagtgtaagcacgcgtaccaccaa
gaatgtcacctaccgagaatcgtctgcgaagccgaatggccaggaagctcctggatgtgc
cggcagtgtgtgtttgctgtggcaacaaagagaggtggagcactgaagaaaggaccttat
gccagggccatgcagcacatgaagcttgtactgccttaccagctcaaggcactagactgg
gacccgctgcatcagagcaatcaacagaagtgttactgctactgtgggggccctggagaa
tggaacatgaaaatgctgcagtgctgcaaatgtaatcagtggtttcacgaggcctgcacc
cagtgtttgagtaaacctcttctctatggagacaggttttacctatttgagtgctctgtt
tgtacaagaggccctgagagtgtttggagacttccattgagatgggtagatgtcgctcat
ctggtggtatatcacctcagtatctgctgcaagaaaaagtactttgattttgaaagggaa
attcttgcatttgcaaatgagaactgggagaacctgctgctgggtgagctctccgacact
cctcgagtagaacgttatagtcagcttctgaatgttcttaacagccgcaaagacaggttt
atatctggtaaggagataaagaaaaagaagtgcctcttcggcctacacagtcgtgttcca
ccgccagtcccacaacacctacaggaagataccagccctgagtcagtcacagaggacgat
gaaggcccggaggaatttgcatctccggcgtgcagaagttctttttcagggcagggtggg
ggcagagagcacaagcggctgagcagcaggaagcagaaaccttcgccacagactatggag
ctgaggagcaggaaggagagactgcgactggagagagctgttacaaagcatgtagtacaa
aatccagtcagtcctagccagagctatacgggctacagtggcagctacaatttccggcgc
acaggatctcgctgcctccaaagcagttcgcctatcaggatgtttgcctctttccaccca
tcagcaaatacatccagctcacttacagactccttccaaaacagtgaagaaggacctgac
ttgcgtgattcttcctgccctgctccgtcctacgagtctgacatctcacagaaagaaaag
tgtcgctccctgccttccacaccttcctgtcgacgcagcccagttacccatgtcagtgcc
cagtctgcagatgacccccctgcccagtcctccagtagtaacagcaccacttcttcttct
tcccccaactactttggagctgtgggacggctggcccgtggagagtcagtgcgcattctg
gctcggagagagactgtggatgggaccatacagtacttggtggagtggggtgatggcagt
gttctgtga
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