Paenibacillus woosongensis: QNH46_21410
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Entry
QNH46_21410 CDS
T09437
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pwn
Paenibacillus woosongensis
Pathway
pwn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pwn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QNH46_21410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwn03021
]
QNH46_21410
03400 DNA repair and recombination proteins [BR:
pwn03400
]
QNH46_21410
Enzymes [BR:
pwn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QNH46_21410
Transcription machinery [BR:
pwn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QNH46_21410
DNA repair and recombination proteins [BR:
pwn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QNH46_21410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
RAD51D_N
PASTA
Motif
Other DBs
NCBI-ProteinID:
WHX48582
UniProt:
A0A7X2Z5I0
LinkDB
All DBs
Position
complement(4622615..4623559)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEVNDDGTYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTVPGVMEDVTEIILNLKALSLKIHSDEEKILEIDAEGEGVITAGDIRADSDVEI
LNPDLHIATLEPGSRLHMRIFAGRGRGYVQADRNKRDDQPIGVIPVDSIYTPIARVNYVV
ENTRVGQVTNYDKLTLEVWTDGSIKPEEAVSLGAKILTEHLYLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTTKTEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRTEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgatagaaatcgaaaagccgaaaattgagaccgtagaagttaacgatgatggcacctat
gggaaatttgtagtagaaccacttgagcgtgggtatggcaccactctgggtaactcgctg
cgtcggattttgctctcttctctaccgggtgcagcggtaacctcggtccagatcgatggc
gttctgcatgaattttcgaccgttccgggtgtaatggaagacgttacggagatcattctg
aatctgaaagctctctctctcaaaatccattcggacgaggagaaaatccttgaaatcgat
gcggaaggcgaaggagttattacagcaggtgatatccgtgcggatagcgatgtcgaaatt
ctgaatccggacttgcatattgctacgcttgaaccgggttccagacttcacatgcgcata
ttcgcaggccggggccgcggttatgttcaggcagatcggaataaacgagatgaccaacct
atcggtgtcattcctgtggattcgatctataccccgattgcacgtgtcaactacgtcgta
gagaatacacgagttggccaagtgaccaactacgacaagctcacgcttgaagtatggaca
gatggcagtatcaaaccagaagaagcggtaagcctcggtgcgaaaatcttgaccgagcat
ctttacttgtttgtgggtctcacagacgaagcgaaggacgcggaaatcatggtggagaag
gaagaggacaagaaggagaaagtgcttgagatgactatcgaagagctcgatctttccgtt
cgttcctacaactgcctcaaacgtgccggtatcaataccgtgcaagagctgacgacgaaa
accgaagaagatatgatgaaggttcgtaacctcggacgcaaatctttggaggaagtccaa
gagaagctggaagagcttggactcggacttcgtacggaagaatag
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