Paenibacillus woosongensis: QNH46_21590
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Entry
QNH46_21590 CDS
T09437
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pwn
Paenibacillus woosongensis
Pathway
pwn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pwn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QNH46_21590 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwn03021
]
QNH46_21590 (rpoB)
03400 DNA repair and recombination proteins [BR:
pwn03400
]
QNH46_21590 (rpoB)
Enzymes [BR:
pwn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QNH46_21590 (rpoB)
Transcription machinery [BR:
pwn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QNH46_21590 (rpoB)
DNA repair and recombination proteins [BR:
pwn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QNH46_21590 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
WHX48617
UniProt:
A0A7X2Z6R5
LinkDB
All DBs
Position
complement(4646896..4650441)
Genome browser
AA seq
1181 aa
AA seq
DB search
MAGHLVQYGRRTRRSYARINEVLEVPNLIEIQQKSYDWFLEEGLREMFQDISPIQDFTGN
LVLEFIDYSLGEPKYTVDDAKERDVTYAAPLRVKVRLINKETGEVKEQEVFMGDFPLMTE
TGTFIINGAERVIVSQLVRSPSVYFSTKIDKNGKKTYTATVIPNRGAWLELEMDAKDIIY
VRIDRTRKIPVTVLLRALGFGTDAEILDLLGNDEYIRNTLDKDNTDSTEKALIEIYERLR
PGEPPTLDNAKSLLVARFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAESLIDTNTGE
IIAEAGQIVDRRLLDEILPYLEEGVGFKNYHVANGVLDSVDVPLQTVDIFSPIEDGKVVK
VIANRNIDKSVKHITPADIISSISYFLNLLHGIGDTDDIDHLGNRRLRSVGELLQNQFRI
GLSRMERVVRERMSIQDANVITPQALINIRPVIASIKEFFGSSQLSQFMDQTNPLAELTH
KRRLSALGPGGLTRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINSLSTFARINEYGF
IEAPYRWVDPKTGKVTDQIAYLTADEEDNYVIAQANAILNEDNTFQDENVIVRYNKQSDN
ILTMPSDRVDYMDVSPKQVVSVATALIPFLENDDSNRALMGSNMQRQAVPLLVPKAPLVG
TGMEHKAAKDSGVCIVSKYDGIIERSAANEIWLRRVEVVDGKEVRGDLVKYKLHKFMRSN
QGTCINQRPIVKRGDVVKKGDILADGPSTEMGELALGRNVVVAFMTWEGYNYEDAILLSE
KLVKEDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEEALRNLDERGIIRVGAEISAG
DILVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGTDGIVVDVKVFTRENGD
ELPPGVNQLVRVYIAQKRKISEGDKMAGRHGNKGVVARILPEEDMPFMPDGTPVQVVLNP
LGVPSRMNIGQVLEIHLGMAALQLGIHVATPVFDGANEYDVFDTMEEAGMQRNGKTVLYD
GRTGERFEREVTVGVMHMIKLAHMVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGAAYTLQEILTVKSDDVVGRVKTYESIVKGENVPEPGVPESFKVLIKELQSLG
MDVKILTENEEEIEMKEIDDEDDATGDKLSLNLEGAEVGVE
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggacatcttgttcaatatggtcgacgcactcggcgaagttatgcacgaattaac
gaggtactcgaagttccgaacctgatcgaaatccaacagaaatcctacgattggttcctg
gaggaaggtctccgggagatgttccaggacatttcgccaattcaggattttaccgggaat
ttggtgttggaatttatcgattacagcctcggcgaaccgaagtatacggttgacgatgcg
aaggaacgcgacgtaacgtatgcggctccgcttagggttaaagtccggctgattaacaaa
gaaaccggcgaagtcaaagagcaggaagtgtttatgggagatttcccgctgatgacggaa
accggcacctttattattaacggtgcggaacgggttattgtcagccagttggtgcgctct
cctagcgtctatttcagtacgaaaatcgataagaatggcaagaagacgtatactgccaca
gtgattccgaaccgcggcgcatggctggagttggagatggacgcgaaggacattatctat
gtccggatcgaccgtactcgtaaaattccggttaccgtgctgcttcgcgcgcttggcttc
ggtacggatgccgagattctggatttgctgggcaatgatgaatatatccgcaacacgctg
gacaaagataacacggactccacggagaaggcgctgatcgaaatttatgaacgcctccgt
ccgggcgagccgccgacgcttgataatgcgaagagtttgctggtggcccgtttctttgat
ccaaaacgctatgatctggccaatgttggccgttacaaaatcaataagaagcttcatatc
aagaaccggctgttcaatcagcgtctcgctgagagcttgattgatacgaataccggagaa
attatcgcggaagcgggtcaaatcgttgaccgccgtctattggacgagatccttccttac
ctggaagagggcgttggcttcaagaactaccatgtagctaacggcgttctcgattccgtc
gacgtgcctctgcaaacggtcgatattttctcgccgattgaggatggcaaggtcgttaaa
gttatcgcgaaccgcaatatcgacaaatcggtcaagcacattacgccggccgacatcatt
tcgtcgatcagttactttctgaatttgctgcacggtatcggcgacacggatgatatcgac
cacctcggcaaccgccgcctgcgttctgttggcgagctgctgcagaaccagttccgcatc
ggtttgtcccggatggaacgcgttgtgcgcgagagaatgtcgattcaggatgcgaacgtg
attacgccacaggcgctgatcaatatccgtccggttatcgcgtccattaaggagttcttc
ggaagctcccagctgtcccagttcatggaccagacgaacccgcttgccgagctgacgcat
aaacgccgtctgtccgcgctcgggcctggcggtctgactcgtgagcgtgcgggctttgag
gttcgggacgttcaccacagtcactatggccggatgtgtccgatcgagacgccggaggga
ccgaacatcggtctgatcaactctctctcgacattcgctcggattaacgagtacggtttc
atcgaggcgccgtatcgttgggttgatccgaagacaggcaaagttaccgatcaaatcgct
tatttgacggctgacgaggaagacaactacgttatcgcccaagcgaacgcgatcctcaat
gaggataatacgttccaggatgagaacgtcattgtccgttacaacaagcaatcggataac
attctgacgatgccgagcgatcgtgtcgactacatggacgtatcgccgaagcaggttgta
tccgtagctaccgcattaattccgttcctggagaacgatgactccaaccgtgcgctgatg
ggatcgaacatgcagcggcaagctgtgccgcttctggttcctaaagctcctctcgtaggt
acaggtatggagcataaagctgccaaagattccggtgtgtgtattgtgtccaaatacgat
ggaattatcgagcgttccgcagcgaacgaaatttggctgcgccgcgtcgaggttgtggat
ggcaaggaagtacgcggtgaccttgttaaatataaattacacaaatttatgcgttcgaac
caaggaacttgcattaaccagcgtccgatcgttaagcgtggagacgtcgtcaagaaaggt
gatattctggctgacggaccgtccacggaaatgggcgaattggcattgggtcgcaacgtt
gtcgttgccttcatgacttgggaaggctacaactacgaggacgcgattctgcttagcgag
aagctggtgaaggaagatgtgtacacttccattcacattgaagaatatgagtccgaagcc
cgcgatacgaagctgggacctgaggaaattacccgcgatattccgaacgtaggggaagag
gcgctccgcaacctggatgagcgcggtattatccgcgtaggtgcggaaatcagcgctggc
gacattctcgttggtaaagtgacgccgaagggtgttacggagctgacagcagaagagcgc
ctgctacatgccatctttggcgagaaggcacgcgaagttcgcgatacctccctgcgtgtt
cctcacggaacggacggaatcgtcgttgacgttaaggtgtttacgcgtgagaatggcgat
gagttgccgccgggcgttaatcagctcgttcgcgtctacattgctcagaagcgtaagatt
tccgagggggacaaaatggctggacgtcacggtaacaaaggtgtcgtagcccgtattctg
cctgaggaagatatgccgtttatgccagatggcacaccggttcaagtcgtgctcaacccg
ctgggggttccttcgcggatgaacatcggacaggtgctggagattcaccttggcatggct
gcgctccaactcggaattcacgtggcaacaccggtcttcgacggtgcgaacgagtatgac
gtgttcgatacgatggaagaagccggtatgcagcgcaacggtaaaaccgtgctgtatgac
ggaagaaccggtgaaagatttgaacgtgaagttaccgttggcgtcatgcacatgattaag
ctggcgcacatggttgacgataaaatccatgctcgctccacgggtccttactcgctggtt
acacagcagccgctcggcggtaaagcccagttcggcggacagcggttcggggagatggaa
gtgtgggcgctcgaggcctatggcgcagcatacacgctccaggaaatccttaccgtcaag
tccgatgacgtggtcggtcgggtgaaaacctacgaatcgatcgttaaaggcgagaatgtg
ccagagccgggcgtgcctgaatcgttcaaagtcttgatcaaagagcttcaaagcttgggt
atggacgtcaaaatcctgactgagaacgaagaagagatcgagatgaaggaaatcgacgac
gaagacgatgcgactggagataaactgagcctgaacctggaaggcgcggaagtcggcgta
gaataa
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