Pyrus x bretschneideri (Chinese white pear): 103943981
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Entry
103943981 CDS
T03446
Name
(RefSeq) LOW QUALITY PROTEIN: putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb00040
Pentose and glucuronate interconversions
pxb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103943981
Enzymes [BR:
pxb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103943981
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
103943981
NCBI-ProteinID:
XP_018502297
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MASLAPLVLSLLCFLTYIAPTFQAYSPDYSTTPKITLKNIMNVVDSCWRTKSNWATNRRA
LADCAVGFGKDALGGKYGRTYVVTTSNDDPVNPKPGSLRYGVIQTQPLWIVFAKDMVITL
KNELIMNSFKTIDGRGAKVEIAYGPCITVQGISHVIIHGISIHDCKPGKGGNVRSTPTHI
GKRRGCDGDAIAVFASSHVWIDHCFLARSADGLLDVTHASTAVTITNNYFSQHDKVMLLG
HNDNFSADKNMRVTIAFNRFGAGLVERMPRVRFGYAHVANNRYDEWKMYAVGGSANPTIF
SEGNYFIAPETSYAKQVTKREAGGSWNNWKWRSSGDVFKNGAFFVQSGYGSCYPLYSRKQ
SFKVSPGAMVPALTSNAGPLRCFIGKIC
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggcctccctagcccctctcgtattatctctcttatgttttttaacttatattgctcca
acatttcaagcctattccccagactactccaccacccccaaaatcactctcaaaaacatt
atgaacgtggtagactcgtgttggcgcaccaaatccaattgggccaccaaccgccgcgcc
ttggccgactgcgcagtaggctttggcaaagacgcattgggaggaaaatacgggcgtact
tacgtagtcacaacctcaaatgatgacccagtaaaccctaaacccggctcacttcgttac
ggggtgatccaaacgcagccattatggatcgtttttgccaaggacatggtgatcacgcta
aaaaatgagctcattatgaatagtttcaagaccatagatggtagaggtgctaaagttgaa
attgcgtacggaccatgcataacggtgcagggcattagccacgttattatacatggaata
agcattcatgattgtaagcctgggaagggtgggaatgttaggagcactcctacacatatt
gggaagcgtcgagggtgcgacggagacgctattgctgtctttgcttcttcgcatgtgtgg
atagaccactgtttcctagctcgtagcgcagatggccttcttgatgtcacccatgcttcc
actgccgtcaccatcacaaacaactatttctctcagcatgacaaagtgatgttgcttggt
cacaatgacaattttagtgcagataaaaatatgagagtcacaatcgcctttaaccgtttt
ggggctggccttgttgaaagaatgccaagggttaggtttgggtatgcgcacgtggccaac
aatagatatgacgagtggaaaatgtatgccgtaggaggcagtgccaatccaacaattttc
agtgaggggaactacttcatagcccctgagacttcttatgccaaacaggttacaaagaga
gaggctggaggcagttggaataattggaaatggagatcttcaggggatgtgttcaagaat
ggtgctttttttgttcaatctggatatggaagctgctatccactttactctcgaaagcag
tcgtttaaggtctctccaggagccatggttcctgctttaacctcaaatgcaggtcctcta
cgctgctttattggcaaaatatgttaa
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