Pyrus x bretschneideri (Chinese white pear): 103949656
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Entry
103949656 CDS
T03446
Name
(RefSeq) crooked neck-like protein 1 isoform X1
KO
K12869
crooked neck
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103949656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pxb03041
]
103949656
03036 Chromosome and associated proteins [BR:
pxb03036
]
103949656
Spliceosome [BR:
pxb03041
]
Complex B
Other components
Prp19-related factors
103949656
Complex C
103949656
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
103949656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_14
HAT
Suf
TPR_19
TPR_16
TPR_CcmH_CycH
ARM_TT21_5th
HAT_Syf1_M
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
103949656
NCBI-ProteinID:
XP_009359043
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MAKDNNGYKDTDDKLPRAKRGKNKAPAPIQITAEQLLLEAREGQEGEIRPPQQQINDATE
LADFRLRMRKGFEDQVRRQKQNARVWIKYARWEESQKELDRARSVWERLLEVDYRNHTVW
VEYAAMEMKNKMINHARNVWERAVQLLPRVDQLWYKYIHMEEMIGNVARAREIFRRWMDW
MPDQQGWIGFIEFELRYNEVDHARAIFEQFVQCHPKADAWIRYAKFEMKNGDLARVRDVF
QTAVDMLDNVEGAEQLFLAFAEFEEGCKEIERARSIYKLGRDRIPKGMAAALYRMFEEFE
ERYGDRQGIEDAVVNKARFKYEQEVRKDPLDYDAWFGYIRLEENAGNKEKIRRVYDRAIA
NVPPAQEKRYWQCYIYLWINYALYEEIDARDEDRARAVYRMCLELIPHKKFTFAKMWILA
AEFEIRQLKLESARKILGTAIGKAAKGKIFKKYIEIEWQLCNADRCRKLYEKYLHWSPEN
CYAWIRYAEFEKRICDTERARSVYELAIGQKQLDKPELLWKSYIDFELAEREFERARNLY
GRLLERTRHVKVWISYAAFEASAVVGGDGMRSEDVIEQKEQCIQRARRVFARASDYFRTS
APELKEQRSMLLEQWVNMEEEFGDFGDVTLVQAKLPRRLKRKRPIVIEDGGTAGFEEYID
HLFPEEALNTNCKLFEAAYNWKRRKDSSAEDGDDKET
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggacaacaatggctacaaggacaccgatgacaagctgccgcgggcgaaaagg
ggtaagaacaaagccccagcccctatccaaatcaccgcagagcaactcctcctcgaggcg
cgtgagggtcaggagggggaaatccgtcctccccaacagcaaataaatgacgctaccgag
cttgctgattttcgcctccgaatgcgcaagggattcgaggaccaagtccggcgccaaaag
cagaatgcccgcgtctggatcaagtatgctcggtgggaggagtcccagaaggaattggac
cgtgcacgctctgtttgggagcggctgcttgaggtagattatcgaaaccacactgtctgg
gtcgagtatgccgcgatggagatgaagaataagatgatcaaccatgcgaggaatgtgtgg
gagcgtgctgtgcaactcttgccgagggtggatcagctctggtacaaatatattcacatg
gaggagatgatagggaatgtggctcgggctcgggaaatatttcggaggtggatggattgg
atgccggaccagcaaggctggatcggattcatcgagtttgagcttcggtataatgaagta
gatcacgcgagagcgatttttgagcagttcgtacaatgtcatccaaaagctgacgcttgg
attcggtatgccaagtttgagatgaagaatggtgaccttgcaagggtaagggatgtgttt
cagacggcagtggatatgctagacaatgttgagggggccgaacagttgtttctggctttt
gctgaatttgaagaagggtgcaaagaaatcgagcgtgcaaggagtatttataagttaggg
cgcgatcgtataccaaaaggaatggctgctgctttgtataggatgttcgaggaatttgag
gagcgttatggggacagacaagggatcgaggatgcagttgtgaacaaggcaaggttcaag
tacgagcaggaggttaggaaggatcctttggattatgatgcctggtttggttatataagg
ctagaagaaaatgcagggaacaaggagaagattagacgagtttatgatcgagcgatcgcc
aatgtaccaccggctcaagaaaagcggtattggcagtgctacatttatttatggatcaac
tatgcattgtatgaggagattgatgctcgcgatgaggaccgtgcacgcgctgtctataga
atgtgccttgaactgattcctcataagaagtttacatttgcaaaaatgtggattctcgca
gccgagtttgagatccgacaactgaaactcgagtctgcacgtaagatacttggtactgca
attggcaaggcagctaaaggcaagatatttaagaagtacattgagattgagtggcaacta
tgtaatgctgatcgctgtcgcaaactgtatgaaaagtatctgcattggtcgccggaaaat
tgctacgcgtggatcaggtatgcagagtttgagaaaagaatttgcgacacagaacgagcc
agatcggtttatgaacttgccatcggccaaaaacaactcgacaagcccgaattgctgtgg
aagtcatacattgactttgaactagcagagagagagtttgagagagctagaaatctgtac
gggcgcctattagaacggacccgacacgttaaagtctggatcagttacgcagcattcgag
gcatcggctgtggtgggaggagacggaatgcgctcagaagatgttattgagcaaaaggaa
caatgcattcagcgcgccagaagggttttcgcgagagcgtcggactattttaggacttca
gcaccggaacttaaggaacaaagaagtatgctgctagaacaatgggtgaacatggaggag
gagtttggggatttcggtgatgttacgttggtgcaagcgaagctgccgcggagattgaag
aggaagaggccaatagttattgaagatggtggtactgctgggtttgaagaatacattgat
catctttttccagaagaagctcttaacacgaactgcaagctcttcgaagctgcctacaat
tggaagaggcgaaaagattcttctgcggaggatggggacgataaagaaacatag
DBGET
integrated database retrieval system
