Pyrus x bretschneideri (Chinese white pear): 103953202
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Entry
103953202 CDS
T03446
Name
(RefSeq) nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103953202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103953202
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103953202
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
TPR_14
TPR_2
TPR_8
TPR_1
TPR_12
Motif
Other DBs
NCBI-GeneID:
103953202
NCBI-ProteinID:
XP_009363215
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MGTEQNMSSWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLETLSKKLKAKTLRNEAPQQS
VAATRLLAREGLNAEQLARDLKSFELKTTFEDVFPSEATNVEEYLQQVHQMAMVSALQEA
QKDNLRSFNDYMLKVLEEDWQKEKRDLLQSLSQISTLPRTNMTYTSSGGSHSGKIASITS
SPQVSSSPSSMELVHLESKPIRDKKASIYAEVVKSLNNARQHGLLFKPATAFNGAYESLG
LDVSGGKSVNMQKIWHLLRTLMGEDITLPRSVSKRMSLVIGARRHLEWGHEKYIMDTIQS
HPVQAALGGVVGNLQRIRAFLRIRLRDYGVLDFDAGDARRQPPVDTTWQQIYFCLRTGYY
DEARSVALSSRASHQFAPLLTEWINTGGMVPAAIAASASEECEKMLRMVDRVGRAAYDKK
KLLLYALVSGSRRQIDRLLRDLPTLFNTIEDFLWFKLSAVRDCPGGAAPIVMNESLVPYT
LDDLQIYLNKFDPSYYTKNGKDPLVYPYVLLLSIQLIPGVLYLFKETGDEGYNIDAAHIS
IVLADHGVLSEGAGAGQKMGVMDAYAEASSIIRQYGSVYLRLGNLSMALEYYAQAAAAVG
GGELSWSGRGNVDQQRQRNLMLKQLLTELLLRDGGIYLLLGSRGAGEEGELGRFLTEAKA
RQQFLLEAAHQCQEAGLYEKSIEIQKRIGAFSMALDTINKCLSEAICALSRGRLDGDSRT
AGLIHSGNEILEMHKYFPDISPQERESVSEQYIVLRQLEAVLSIHKLAIGGRYADALREV
ARLQFLPLVPGTPDATTDVFQNLSPHVQACVPDLLKVALTCLDNMVDSDGSLRALRAKIA
SFIANNSNRNWPRDLYERVARSL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgggaacggagcaaaacatgagtagctggaccgatctgctccactcctccaccaagctt
ctcgaacaagcggcgccttccgctcagttccctccgctacagaggaatttagatcagtta
gaaacattatcaaagaaactcaaggcgaaaactctacgaaatgaggctcctcaacaatcc
gttgctgccacaaggcttcttgcacgtgagggactaaatgcagagcagcttgcacgtgac
cttaagtcctttgaattgaagacaacatttgaagatgtttttccgtctgaagcaacaaat
gttgaagagtatctgcagcaggtccatcaaatggcaatggtctcggctcttcaagaagct
cagaaggataaccttagaagttttaatgattacatgttaaaagttttggaggaggattgg
caaaaggaaaaacgtgatctccttcaaagcttaagccagatttcgacattacccaggacc
aacatgacttatactagtagcggtggtagtcattctggtaaaatagcatccataacttct
agccctcaagtttcatcttctccatctagcatggagcttgtacatttagaaagcaagccc
atccgtgacaagaaagcctctatctatgctgaagttgtaaaaagtctgaataatgcaagg
cagcatggattactgtttaagcccgccacagctttcaatggtgcttatgagagtttaggc
cttgatgtatctggtggaaaatcagttaacatgcagaagatatggcaccttcttcggacg
ttgatgggtgaagatataaccctaccgcgtagtgtttcaaaaaggatgtcattagttatt
ggggcaaggcgccacctagaatgggggcatgaaaaatacatcatggatacaattcaaagt
catccggtgcaggctgcccttggaggagttgttggaaatttacaaagaattcgtgccttt
cttcggattcgtttaagagattatggagttctagattttgatgcaggcgatgctcgtcgg
cagcctcctgttgataccacttggcagcagatctacttttgcttgagaactgggtattac
gatgaagcaagatctgttgctctgtcatctcgtgcttcacaccagtttgctcctctgctt
acggagtggattaatactgggggtatggtgcctgcggccattgcagcttctgcttcagaa
gaatgtgaaaaaatgttaagaatggttgatcgtgtgggccgagctgcatatgacaagaaa
aagttgttattatatgctctagtatctggttctcgtaggcaaatcgaccgcctactaaga
gatctaccaacccttttcaacactatagaggatttcttgtggttcaaattgtcagctgta
agagattgccctggtggagctgcacccattgttatgaatgagagcttggtaccatacaca
ttggatgatttgcagatttacttaaataaatttgacccatcatattatacaaaaaatgga
aaggacccccttgtgtacccatatgttttgcttttaagcatccagttgataccaggtgtg
ctatacttgtttaaagaaactggagatgagggatataacattgatgctgcccacatatca
attgtgctagcagaccatggggtcctttctgaaggtgctggtgctggacagaaaatgggc
gtgatggatgcttacgcagaggcatcaagcataatcaggcagtatggatctgtgtattta
cgtcttggtaatctatcaatggcattagaatattatgcacaagctgctgctgcggttggt
ggtggggagttgtcatggtctggaagaggtaacgttgatcagcaaaggcagagaaatttg
atgctgaagcagctccttacagagctgttgttgcgggatggtgggatatatttattactt
ggttcaagaggtgccggagaagaaggtgaattgggtcgatttttgactgaagcaaaagca
aggcaacaatttcttcttgaagctgcacaccaatgtcaagaagctgggttgtatgaaaag
tctatagaaattcagaaacgaataggagcattctcgatggcattggatactattaacaag
tgtctctctgaagcaatttgtgccctttcacgtggtagattggatggtgatagtcgaact
gctggcctcattcactctggaaatgagatcttggaaatgcacaaatattttcctgacata
agtcctcaagagagggaaagtgtttctgagcagtacattgttttaagacaacttgaggcc
gtattgtcaatccataaattggcaataggaggccgttatgctgatgctttaagggaggtt
gccaggcttcaatttcttccattagttcccgggacaccagatgctaccaccgatgtcttc
cagaatttatctccgcatgtccaagcctgtgttccagacctcttgaaggttgccctcact
tgtctggacaacatggtggattcggatggatcgcttcgtgccttgagggctaagattgct
agcttcattgcaaataattccaataggaactggcctcgtgatttgtatgagagagttgcc
cggagcttgtga
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