Pyrus x bretschneideri (Chinese white pear): 103966909
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Entry
103966909 CDS
T03446
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103966909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxb03400
]
103966909
DNA repair and recombination proteins [BR:
pxb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
103966909
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Helicase_C_2
DUF5508
CoaE
GvpD_P-loop
Motif
Other DBs
NCBI-GeneID:
103966909
NCBI-ProteinID:
XP_009378410
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
LCKRGIHQLMLDEEIGSRCRFCSYLDQEIKYIVPEFVKYPCERFGARVSEPDNLSIFDEL
QSLDYGSDPHSGCSSHVHAEGTVWDFIPGVKSSMYSHQREGFEFIWNHIAGGIHVEELKR
RSSDYSGNGCIISHAPGTGKTRLTIVFLQTYLKLFPKCRPLLIAPRSMLLTWEEEFKKWE
FDIPFHNLNNTELSGEENEAAVDLMMKIDGPKSINRVNNSRMLKLYSWAKERSILGISYH
LFEKLSGADHSGAKKKGLAEVMRDILVEFPGLVVFDEGHTPRNNKSHIWKALSEIKTKKR
ILLSGTPFQNNFQELFNTICVVRPMFAASIDSAKFTGDFLRSRARKSNVEKWQWTSVANC
SEKVADEKEQHATEVKEKIAPFVNVYKGSVLQDSLPGLRNSVVVLHPMQLQKKFHQRIQG
VKEQFQYEHLEAINSIHPSLLLHEDAFSGDWDRLKELKLNPDAGVKTKFLMELIRLSDAL
NERVLVFCQYISPLTLARDLLRSQFHWSEGEEVLYMDGKCDMKQRQSSMKIFNDPSSKAK
VLLASTKGCCEGISLVGASRVVLLDVTWNPSVERQAISRAYRLGQKKIVYVYHLLMDGTN
EEHKYRRQVDKSRLSELVFSDSDRNDSLEKKIRAVSEDKILEEMAQHEKLKHIFESIALL
HEDIYFEQLGLSTFG
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
ctttgtaagcgagggattcatcagcttatgcttgatgaagagattggaagcagatgcaga
ttttgctcttacttagatcaggagatcaagtatattgtaccagaatttgttaagtaccct
tgcgaaagatttggtgcaagagtctctgaaccagacaacctgtctatctttgatgagctt
caatctcttgactatggttccgatccccattctggctgcagttctcacgttcatgctgaa
ggcacagtgtgggacttcattccgggtgttaaaagcagtatgtattctcatcagcgtgaa
ggctttgaattcatctggaatcatatagctggtggaatacatgttgaggagctgaaaaga
agaagcagtgattattctgggaatggatgcataatttcacacgctcctggaactggaaag
acacggctaaccattgtctttctccagacatacctgaagttgtttccaaagtgccggcca
cttttgatagctcctcgcagcatgctgctaacttgggaagaggagttcaaaaaatgggag
ttcgacattccttttcacaatctaaacaacacggagttatctggtgaagaaaacgaagca
gctgttgatttgatgatgaaaattgatggcccgaaaagcataaacagagtaaacaacagc
agaatgttgaagctgtattcctgggcaaaggaaagaagcatcctgggaatcagttatcac
ttgtttgagaagctttctggggcagatcattctggagccaagaaaaaaggcctagctgag
gtaatgagggatatccttgttgagtttcctggtcttgtagtatttgatgaaggccacact
cctcggaataacaaaagtcatatttggaaggctttatcagaaatcaaaactaaaaagcgg
atacttctgtccggaactcctttccagaataattttcaggagctctttaatacaatctgc
gtggtgaggcctatgtttgcagcctcaatcgactctgctaaattcactggagattttctc
agatcccgagcccgaaaaagcaacgtagagaagtggcagtggacttctgtggccaattgt
agtgaaaaagttgctgatgaaaaagaacaacatgctacagaggtcaaagaaaagattgcc
ccgttcgtcaatgtctacaagggctctgtactgcaagatagtcttcctgggttaaggaac
tccgttgttgttttacacccgatgcagctacagaaaaagtttcatcagagaattcaaggt
gtaaaggaacaatttcaatatgaacacttggaagctataaattccattcatccttccctc
ttgcttcacgaagatgcattttctggtgattgggataggttaaaagaactgaaattgaat
cctgatgctggagtgaagacaaaatttttgatggaactcattcgtctcagtgatgctttg
aatgagagggttcttgttttctgtcagtatattagtccattaactcttgcaagggatctt
ctgagatctcagtttcactggagtgaaggggaagaagtgctctatatggatggaaaatgt
gatatgaagcagcgtcagtcttcgatgaaaattttcaatgatccatccagtaaagcaaag
gttttactagcttcaactaaaggatgctgcgaaggcataagcctagtcggagcttcaagg
gttgtgttgctcgatgtcacttggaatccatcagtggagaggcaagcaatatcccgtgcc
tacaggctggggcagaaaaaaattgtctatgtgtaccacctcctcatggatggaacgaat
gaagagcacaaataccggcggcaagtggacaaaagccgtttgtctgagctggtattttct
gattcggacaggaatgattctctcgagaagaaaatccgagccgtttctgaggataagatt
ttggaggagatggctcaacatgagaaactgaaacacatattcgagagcatagctttgctg
catgaagacatatattttgagcagctaggcctctcaacttttggttaa
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