Pyrus x bretschneideri (Chinese white pear): 103967545
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Entry
103967545 CDS
T03446
Name
(RefSeq) uncharacterized protein LOC103967545
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103967545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103967545
03400 DNA repair and recombination proteins [BR:
pxb03400
]
103967545
Enzymes [BR:
pxb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
103967545
Messenger RNA biogenesis [BR:
pxb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
103967545
DNA repair and recombination proteins [BR:
pxb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
103967545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HTH_40
RecQ_Zn_bind
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
103967545
NCBI-ProteinID:
XP_009379064
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MQSILKKYFGFSSFRPYQKEVIEKIIEGNDSLIVMATGSGKSLCYQVPPLVVGKTGVVVS
PLISLMQDQVMSLKQRGIRAEFMGSSQTDSTVQSRAESGQFDILYMTPEKACLVPSSFWS
NLLSVGLCLFAVDEAHCISEWGHDFRVEYKKLDKLRGLLVDVPFIALTATATDKVRMDIV
NSLKMQNPYVAIGSFDRTNLFYGVKSFNRGQSFVQELVQEVSKFVRSDGSTIIYCTTIKD
VEQVFESLKEVGIKAGIYHGQMDNKTRAESHRLFVRDELDVMVATIAFGMGIDKPNIRQV
IHYGCPKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKADFYIGELHSESQRKAVVESL
MAAQRYCLLTTCRRKALLGHFGEKFPADKCGNCDNCTSTKRERDMSKEAFLLMACIQSCR
GKWGLSMPVDILRGSRAKKIIDAQYDKLPLHGLGKDYSSNWWKALGYQLISSGYLMETVK
DIYRTVSLSPKAYQFLSSAGPDHQPPLFLPVTSEMVNDEDNKHASGEVGEIKSLATLECE
GFSEAEKQLYHILLEERRKLARSLGTAPYAICGDQTIKKIALARPSTKARLANIDGVNQH
LVVTHGNNFLRIIRDLSQGLNLSLDGEATVQTTAITRKVYPVPNQPRKLTPAKFEAWKLW
HVEGLSIQKIANFPGRSAPIKEQTVLDYLVEAAQEGCEIDWIRLCNEVGLTHKVLSDIQC
AISKVGPTERLKPIKDELPEDISYAHIKTCLAMQKLGVSLEGTPSSPHDAQEAGQLPSKE
TESSPCSARKSPTEEPLEDKALAQDSVASSGKVEETTSLPLTRGQGVNQPEAHLEDLLPT
KRQKLGSPDDESSLALKATESSIYDWLKNQDGVSLAQILEHFSGSEEQSVIDILSSLEVD
FLIYKKTNLYMII
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccattctcaagaaatattttgggttttcttcgtttcgaccgtaccagaaggaa
gtgattgagaaaatcatagaaggaaacgactcattgattgtgatggccaccggaagcggc
aagtcgttgtgctatcaggtccctccgttggttgtcggaaagactggtgttgttgtgagc
cctcttatatccctaatgcaagatcaggtaatgtctttgaagcaacgcggaattagagcc
gagtttatgggaagtagccaaactgattccactgtccagagcagagctgaaagtggtcaa
tttgatatcttgtacatgaccccggaaaaggcatgtttggttccttcaagtttctggtcc
aacttgctgagtgttggactctgtttgtttgctgttgatgaagcacattgcatatcagag
tggggccatgatttcagggtagaatacaagaaactagacaagttacgtggccttcttgtt
gatgttccatttattgccttaactgcaactgctactgacaaggttcggatggacattgtt
aattccttgaagatgcaaaacccatatgttgccataggctcatttgaccggacaaatctg
ttctatggtgtcaagtcattcaatcgtggtcaatcatttgttcaggagctcgttcaagaa
gtttcaaaatttgtgcgttcagatggttcaactatcatttactgtacgacaattaaagat
gttgagcaggtattcgagtcactcaaggaggtaggtattaaggctggaatctatcatggt
caaatggacaataaaactcgtgcagagtcccatagattgtttgtacgagatgaactcgat
gtcatggttgctacaattgcttttggaatgggtattgacaagccaaacataaggcaagtg
atacattatggttgcccaaagagcttggagtcttattaccaggaaagtggacgatgcggt
agagatggtattgcatctgtctgctggctttattacactagaagtgactttgcaaaagct
gacttctacattggagagctacattctgaaagtcaacgtaaagctgttgtagagtcgttg
atggcagcacaacggtactgcttactgacaacttgcagaaggaaggctttgcttggtcat
tttggggaaaagtttccagctgataaatgcggtaattgtgataactgcacttccacaaag
agggagcgagacatgtctaaagaagcatttcttctaatggcttgcattcagtcatgtagg
ggtaaatggggtctcagtatgcctgtagacattcttcgtggctctcgagctaaaaaaatt
attgatgcccaatatgacaagcttccactgcatgggcttgggaaagactattcttcgaat
tggtggaaagcgcttggttaccaattaatctcttctggttatttgatggagacagtaaag
gacatataccgaactgtaagtcttagtccaaaagcttaccaatttcttagttctgctgga
ccggatcatcaaccacccctattcttgccggtgaccagtgaaatggtcaatgatgaggac
aacaaacatgcatcaggcgaagttggagaaattaagagtttggctactctggaatgtgaa
ggattctcagaggcggagaaacaactctaccacattcttttagaagagagaaggaagctc
gcaagaagccttggaaccgctccatatgctatttgtggtgatcaaacgattaaaaaaatt
gctttagcaagaccatctaccaaagcaaggctagcaaacatcgatggtgtcaaccagcac
cttgtagtgactcatggaaacaattttcttcggatcattcgggatctatcacaaggacta
aatctttcattggatggagaggcaaccgtacaaactactgctattacgagaaaagtctat
ccagtacccaaccaaccaagaaagttaacgccagcaaagtttgaagcctggaaattgtgg
catgttgagggtttgtcgattcagaaaattgctaacttccctggtagatctgctcctatt
aaagagcagactgttcttgattatctggtagaagctgctcaagaaggatgcgaaattgat
tggatcaggctatgcaacgaggttggactaacgcataaagttctctccgatatacagtgt
gccatttcaaaggttggccctacagaaaggttaaagcctatcaaagacgaattgccagaa
gatataagttatgcacacatcaagacttgcctggcaatgcaaaagcttggagtgtctctg
gaagggactccatctagcccccatgatgcacaagaagctggtcaacttccaagcaaggaa
acagaatcgtcaccatgttctgctcgtaaatcccctacggaagaacctcttgaagataag
gcattggcccaagattcagttgcaagctcgggtaaagttgaagagaccacttctcttccc
ttgaccaggggacaaggagtaaaccaacccgaagcacatttagaggatttactcccaaca
aaacgccaaaaacttggtagtccagatgatgaaagttcccttgcattgaaggcaacggag
agttccatatacgattggcttaagaaccaagacggggtctctctcgctcagattttggag
cacttcagcggatctgaagaacaatctgtgatcgatatacttagctcccttgaagttgac
tttctaatatataaaaagaccaacttgtatatgattatctaa
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