KEGG   Pyrus x bretschneideri (Chinese white pear): 103967545
Entry
103967545         CDS       T03446                                 
Name
(RefSeq) uncharacterized protein LOC103967545
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
pxb  Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pxb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103967545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pxb03019]
    103967545
   03400 DNA repair and recombination proteins [BR:pxb03400]
    103967545
Enzymes [BR:pxb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     103967545
Messenger RNA biogenesis [BR:pxb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     103967545
DNA repair and recombination proteins [BR:pxb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      103967545
SSDB
Motif
Pfam: DEAD RQC Helicase_C HTH_40 RecQ_Zn_bind HRDC ResIII
Other DBs
NCBI-GeneID: 103967545
NCBI-ProteinID: XP_009379064
LinkDB
Position
Unknown
AA seq 913 aa
MQSILKKYFGFSSFRPYQKEVIEKIIEGNDSLIVMATGSGKSLCYQVPPLVVGKTGVVVS
PLISLMQDQVMSLKQRGIRAEFMGSSQTDSTVQSRAESGQFDILYMTPEKACLVPSSFWS
NLLSVGLCLFAVDEAHCISEWGHDFRVEYKKLDKLRGLLVDVPFIALTATATDKVRMDIV
NSLKMQNPYVAIGSFDRTNLFYGVKSFNRGQSFVQELVQEVSKFVRSDGSTIIYCTTIKD
VEQVFESLKEVGIKAGIYHGQMDNKTRAESHRLFVRDELDVMVATIAFGMGIDKPNIRQV
IHYGCPKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKADFYIGELHSESQRKAVVESL
MAAQRYCLLTTCRRKALLGHFGEKFPADKCGNCDNCTSTKRERDMSKEAFLLMACIQSCR
GKWGLSMPVDILRGSRAKKIIDAQYDKLPLHGLGKDYSSNWWKALGYQLISSGYLMETVK
DIYRTVSLSPKAYQFLSSAGPDHQPPLFLPVTSEMVNDEDNKHASGEVGEIKSLATLECE
GFSEAEKQLYHILLEERRKLARSLGTAPYAICGDQTIKKIALARPSTKARLANIDGVNQH
LVVTHGNNFLRIIRDLSQGLNLSLDGEATVQTTAITRKVYPVPNQPRKLTPAKFEAWKLW
HVEGLSIQKIANFPGRSAPIKEQTVLDYLVEAAQEGCEIDWIRLCNEVGLTHKVLSDIQC
AISKVGPTERLKPIKDELPEDISYAHIKTCLAMQKLGVSLEGTPSSPHDAQEAGQLPSKE
TESSPCSARKSPTEEPLEDKALAQDSVASSGKVEETTSLPLTRGQGVNQPEAHLEDLLPT
KRQKLGSPDDESSLALKATESSIYDWLKNQDGVSLAQILEHFSGSEEQSVIDILSSLEVD
FLIYKKTNLYMII
NT seq 2742 nt   +upstreamnt  +downstreamnt
atgcagtccattctcaagaaatattttgggttttcttcgtttcgaccgtaccagaaggaa
gtgattgagaaaatcatagaaggaaacgactcattgattgtgatggccaccggaagcggc
aagtcgttgtgctatcaggtccctccgttggttgtcggaaagactggtgttgttgtgagc
cctcttatatccctaatgcaagatcaggtaatgtctttgaagcaacgcggaattagagcc
gagtttatgggaagtagccaaactgattccactgtccagagcagagctgaaagtggtcaa
tttgatatcttgtacatgaccccggaaaaggcatgtttggttccttcaagtttctggtcc
aacttgctgagtgttggactctgtttgtttgctgttgatgaagcacattgcatatcagag
tggggccatgatttcagggtagaatacaagaaactagacaagttacgtggccttcttgtt
gatgttccatttattgccttaactgcaactgctactgacaaggttcggatggacattgtt
aattccttgaagatgcaaaacccatatgttgccataggctcatttgaccggacaaatctg
ttctatggtgtcaagtcattcaatcgtggtcaatcatttgttcaggagctcgttcaagaa
gtttcaaaatttgtgcgttcagatggttcaactatcatttactgtacgacaattaaagat
gttgagcaggtattcgagtcactcaaggaggtaggtattaaggctggaatctatcatggt
caaatggacaataaaactcgtgcagagtcccatagattgtttgtacgagatgaactcgat
gtcatggttgctacaattgcttttggaatgggtattgacaagccaaacataaggcaagtg
atacattatggttgcccaaagagcttggagtcttattaccaggaaagtggacgatgcggt
agagatggtattgcatctgtctgctggctttattacactagaagtgactttgcaaaagct
gacttctacattggagagctacattctgaaagtcaacgtaaagctgttgtagagtcgttg
atggcagcacaacggtactgcttactgacaacttgcagaaggaaggctttgcttggtcat
tttggggaaaagtttccagctgataaatgcggtaattgtgataactgcacttccacaaag
agggagcgagacatgtctaaagaagcatttcttctaatggcttgcattcagtcatgtagg
ggtaaatggggtctcagtatgcctgtagacattcttcgtggctctcgagctaaaaaaatt
attgatgcccaatatgacaagcttccactgcatgggcttgggaaagactattcttcgaat
tggtggaaagcgcttggttaccaattaatctcttctggttatttgatggagacagtaaag
gacatataccgaactgtaagtcttagtccaaaagcttaccaatttcttagttctgctgga
ccggatcatcaaccacccctattcttgccggtgaccagtgaaatggtcaatgatgaggac
aacaaacatgcatcaggcgaagttggagaaattaagagtttggctactctggaatgtgaa
ggattctcagaggcggagaaacaactctaccacattcttttagaagagagaaggaagctc
gcaagaagccttggaaccgctccatatgctatttgtggtgatcaaacgattaaaaaaatt
gctttagcaagaccatctaccaaagcaaggctagcaaacatcgatggtgtcaaccagcac
cttgtagtgactcatggaaacaattttcttcggatcattcgggatctatcacaaggacta
aatctttcattggatggagaggcaaccgtacaaactactgctattacgagaaaagtctat
ccagtacccaaccaaccaagaaagttaacgccagcaaagtttgaagcctggaaattgtgg
catgttgagggtttgtcgattcagaaaattgctaacttccctggtagatctgctcctatt
aaagagcagactgttcttgattatctggtagaagctgctcaagaaggatgcgaaattgat
tggatcaggctatgcaacgaggttggactaacgcataaagttctctccgatatacagtgt
gccatttcaaaggttggccctacagaaaggttaaagcctatcaaagacgaattgccagaa
gatataagttatgcacacatcaagacttgcctggcaatgcaaaagcttggagtgtctctg
gaagggactccatctagcccccatgatgcacaagaagctggtcaacttccaagcaaggaa
acagaatcgtcaccatgttctgctcgtaaatcccctacggaagaacctcttgaagataag
gcattggcccaagattcagttgcaagctcgggtaaagttgaagagaccacttctcttccc
ttgaccaggggacaaggagtaaaccaacccgaagcacatttagaggatttactcccaaca
aaacgccaaaaacttggtagtccagatgatgaaagttcccttgcattgaaggcaacggag
agttccatatacgattggcttaagaaccaagacggggtctctctcgctcagattttggag
cacttcagcggatctgaagaacaatctgtgatcgatatacttagctcccttgaagttgac
tttctaatatataaaaagaccaacttgtatatgattatctaa

DBGET integrated database retrieval system