Papilio xuthus (Asian swallowtail): 106113731
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Entry
106113731 CDS
T07456
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106113731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxu03019
]
106113731
Messenger RNA biogenesis [BR:
pxu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106113731
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106113731
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
NOT1_connector
CNOT1_CAF1_bind
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
106113731
NCBI-ProteinID:
XP_013162063
UniProt:
A0AAJ7E472
LinkDB
All DBs
Position
Unknown
AA seq
2429 aa
AA seq
DB search
MNLDSLTFSLSRIHYLVINLSKKNFKQTSQELSLIVSHYGLEAENQLLRSLLTEAAKTSL
DTDRTGPAVNSIHATLLAQYLGSLLSHPAKSTVVCQAVDNPNRSVQKILKPSNTLLNRLS
RLLKLTTAEDVTLSLVLRRYSSKTEITALAKQHLKKRFLDLVQCYLDAEHGHQAERAGLQ
ECSPEVLQTLLISLAYENFRLAPVTKELFVKRLRVDFPREVVPIVLAPLLYPDDTQTPLE
EMSTADDMAVAMMDNSLADIIRDIGYNFTSSFEECKNNMLNFGAREPTAIDIARIISMMV
RYHTTVPDGPPIQTPGNFWTNHEAKKEAITHGHGESWNAEIFVQTLKELASNLNWKEVIL
QLDHPEFIVPDRQGLSLLFSILRLGLQSAGYPSNIFPVEYLCRRWTNLEGQMSLITNILK
HPDIFSLADYPFHPVSIDILKSLPESDNKEIATWRCLYLVELLLYASERGYYMQVHELFK
FPLQHCPDILMLALLQINAPITVFQQELLSTLIPIFLGNHPNSGIILQHAWHSQNPNIKP
IIMHAMAEWYIRGDSDQSKLSRILDVAQDLKALSLLLNVQSFPFVIDLACLASRREYLKL
DKWLTDKIRDHGETFVSAMVKFLQRRCPPVMGKPPEEQLPKAAQLPPETIGTMLTCLQLC
APNVVQELQEAIYNVVATCQTLIINKTRQTMAGIARPHTRVIETPFNPAALGGQLFTPHV
DSIANLTPNVANMTLGAPANTAFAMPGTLGPLVPPPGSPSRLLGPGPNSPYPMMAIPHNP
NIPNMGALRMAQMPPMDKFRLPDQIHFPEIMHNVSKEIEDEANGYFQRIYNHPPHPTLSI
DEVLEMLKKFQDSPNKREREVFSCMLRNLFEEYKFFPQYPDKELHITAQLFGGIIEKGLV
PTYVSLGLALRFVLDALRKPEGSKMYYFGIAALDRFKSRLKDYHKYCEHVRAIPHFSEFP
PHLIEYIEYGLQSQEPPTKPQGAVLPASLAAMLSQNTVVTVSAPYRTVVGAPNPMSVISK
MANCVAGGIGSRPSIAIATNIDTLLTATDREEKINAPPEAVQDKTAFIFNNLSQLNLQTK
CEELKESITEEYYPWLSQYLVMKRASIEFNFHALYSNFLDVLKAREVNRLVIIETYRNIK
VLLRSDKSIANFSDRSLLKNLGHWLGMLTLARNQPILLVDIDLKTLLLEAYHKGQQELLY
VVPFVAKVLESCARSSAFKPPNPWTMGLMNVLAELHQEPDLKLNLKFEIEVLCKNLSLDI
SDLKPTLYLKDPEKHRLIEFQLSPPKMNKEPPVNVIPMNPTIIQAPQMQMMPPQPPMIPV
EEMTLTVPPPPIGIDPSLMGVLGIPEPRFNYLDVNVTSTSAFGQKICFNHHILLFQTYPH
LKQFVKPAIERSIQEWIHPVVDRSIKYALTTCEQIIRKDFALDPDEGRMRTCAHHMMRNL
TAGMAMITCREQIISTISTNLKAAFLTALMPANPQQLVFQKDIVESAAAVIATENMELAC
AFIQKTAVEKALPELDKRLMNDYEVRKQARLENRRYYDPVVLSYQTENLPERVRLRMGGP
MDMQIAVYEEFACNIPGFMPVRDAGMFIPKPSQEQIPQLTFSQVMNPTQVYGTDEMGALI
SAAEMFLSNAMNTQSFPVQATNMHTLLECLVIARRNRDIVSGCNLLQRAVEGLLDGHIIQ
SGVNAEHVDLMTRYRDIHLRVLKLLEDARVYGHVWTTKQITCCLTECRDELRYNIEAVDC
LIRNHLINMPQYDLALAHLMDNGNNYVAVAFAMQLVQLYLVDDRNNIFVNESDLYHTTET
LVRIMAHPQQPPPEGLATLIETLRINQDPSAYLGERMPLGPTAHIHAGIAQVRNREYDDP
PGLQEKTENVLREWRTMLLSPLTDVEFSQNFNIYVHRMNINGILKSDDMVTRFFRIATQM
CVENVYQLLNEEKANPPAVPNKREKYYVICDSFIKLVSLLIKNTADAGNPTPKLNLLNKI
LGIIAGCLMQDHDDPGHEFHQLPYHRLLMILFLDMNMAEPVLESMNYQVLTAFCHTLRII
RPSVAPGFCYAWLEILSHRAFVNRVLAVTPQQKLYHCFIQGWGMYSTLLIDLFKFLDPFL
RNTELAPPVMALYKGTLKVLLVLLHDFPEFLCDYHFGFCDEIPPNCIQMRNLILSAFPRN
MRLPDPFTPNLKVDLLSEIALSPRAVINYATIIPITQFKKDLDAYLKARTPVTFLSELRS
NMQFPQVVNEPGRRYNTHLLNAVVLYVGAQAIAYIRSKGQTPNMTTIAHSAHMDIFQNFT
VDFDYEGRYLFFNAIANQLRYPNSHTHYFSCCLLYLFAEANSEAIQEQITRMLLERLIVN
RPHPWGLLITFIELIKNPVYKFWSHEFVHCAPEIEKLAKRRNATSDHQPALHLVRSAQAV
EPTVQVNPLQGFNFNVGEGQQTMVNSQPK
NT seq
7290 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactctttaacctttagcttatcacgaatccattatcttgttataaattta
agtaagaagaacttcaagcaaacaagtcaagagttgtcactgattgtcagtcactatggc
ttggaagcggaaaatcagttgctgaggtctttgctcacggaagcagcaaagacttctttg
gatactgatcgcacaggcccagcagtcaacagcattcatgctactcttctggctcagtat
ttgggttcgttgttgagccatcctgccaagtcgactgtcgtctgtcaggctgtggacaac
cccaatcgttctgtgcagaagattttaaaaccttctaacactttactcaatcgtctttca
agattgttgaagttaacaactgccgaagatgtcaccttgtcgttggtgttgaggcgatat
tcgtccaagactgagattacagcgctagcaaaacaacatctgaagaaaagattcttagat
ctagtacagtgttatttagatgctgagcatggtcatcaggctgagcgtgcaggccttcag
gaatgcagccctgaagttttgcaaactctccttataagtctcgcgtacgagaactttcgc
ctcgctccggtaacaaaagagttatttgtgaaacgtttacgtgttgacttccctcgagaa
gtcgtgccaatagtgttagcaccgttgctttatcccgacgatacacaaaccccgttggag
gaaatgagcactgccgacgacatggcggtcgcaatgatggataactcattagcggatatc
atccgcgatattggatacaactttacatcatcattcgaagaatgcaagaacaacatgttg
aactttggagcgcgagagcctaccgcaatagatattgcgcgtataatttcgatgatggtg
cgttatcataccacagtgcccgatgggcccccgattcaaactccgggaaacttctggacg
aatcacgaagcaaagaaagaggcaattacacatggacatggagaatcctggaatgcagag
atatttgtacagacattgaaagagctggcatctaacctgaattggaaagaagtcatattg
caactggaccatccagaatttattgtcccagacagacagggactgagcctattgttctcc
atcttgcgtttaggtctacagagtgcaggctatccatccaacatattccccgtggaatat
ctatgccgcaggtggaccaacctggaaggacaaatgagtttgattactaatattttgaaa
catccagatatatttagccttgctgattatccattccatccggtgtccattgacattctc
aagtccttgccagaaagtgataacaaagagatagccacctggaggtgtctgtacctggtt
gaactgctgttgtatgcatctgagcgaggctactacatgcaagtccatgagctgttcaag
tttcctttacagcattgccctgacattttgatgctcgccttgttgcaaataaatgcacca
atcactgtatttcaacaggaattgctgtctactttaataccaatatttttaggcaaccac
cccaattctggaatcattttgcaacatgcgtggcattcacagaatccgaacatcaaacca
attatcatgcatgcaatggcggaatggtatatacgcggagacagtgatcaatccaagtta
tcaagaatcttggatgtggctcaagacttaaaagctttatcgctgctactgaatgtccag
tcttttccctttgttattgacttagcttgccttgcatcaagaagggagtaccttaaattg
gataaatggttaactgacaaaatacgagaccacggtgaaacttttgtctctgctatggtt
aaatttttgcagagaagatgtccaccagtgatggggaaaccaccagaagagcagttgccc
aaagccgcgcagttgcccccggagactattggcaccatgctgacctgtttgcagctctgc
gctccaaatgtcgtccaggaattgcaggaagctatctataatgtggtagcgacctgccag
actttaatcattaataaaacaagacaaacgatggcgggaattgctcgtcctcatacaaga
gtcattgaaacaccgtttaaccctgcagctttgggagggcaacttttcactccgcatgtc
gattcgatagctaatcttactccgaatgtcgctaatatgaccttaggcgcaccagcaaat
accgcattcgcaatgcctggcactttagggcctttagtgccaccccctgggtctccttct
cgattgctaggaccggggcctaacagcccttaccccatgatggcaattccgcataatcct
aacattcccaatatgggcgctttacgaatggcgcaaatgcctcccatggataaatttcgt
ttacccgatcagattcatttccctgaaattatgcacaatgtttcaaaagaaatcgaggat
gaggcaaatggctattttcaaaggatatacaaccaccccccacaccctactctgtctata
gatgaggtgctagaaatgctaaagaagtttcaagattcgccaaataaaagagagcgagaa
gtattttcatgcatgcttaggaacttattcgaggaatacaaattcttcccgcaatatccc
gacaaagaacttcatattaccgctcaattatttggtggtatcattgaaaagggtcttgtt
ccgacttacgtgtcgttgggtttagccttgcgatttgttttggatgcgcttcggaagccg
gagggctctaaaatgtattactttggtatagctgcgttggacagattcaaatcacgttta
aaggactatcacaagtactgtgagcatgtccgtgctataccacattttagtgaattccct
ccgcatctgattgagtatatcgaatatggactgcagagtcaagagccgcccacaaagcct
cagggtgccgtgttgcccgctagtctggccgctatgttgagtcaaaatactgttgtcacg
gtttccgcgccatacaggaccgtggtaggtgccccgaaccccatgagcgtgatatccaaa
atggcgaactgcgtggccggcggcatcggcagtcggccgtccatcgccatcgccaccaac
atcgacacgctgctcacagccaccgatagggaagagaagattaacgcgcccccagaagct
gtacaagataaaaccgcattcattttcaataacttgagccaactcaatcttcagactaaa
tgcgaagagcttaaagaaagcataaccgaagaatactatccttggctttcacaatatctt
gttatgaaacgggcatccattgaattcaatttccatgccttgtattctaatttcctagac
gtcctaaaggcgcgagaagttaataggcttgtcataattgagacttatcgaaatatcaaa
gtgttgttgcgttccgataaaagcatagccaactttagtgaccgatctttgcttaaaaat
ctcggccattggttgggaatgctcacgctggctcgcaatcaaccaattcttctcgttgat
attgacctcaaaacacttttacttgaagcttatcataaaggccaacaagaactcttgtac
gtcgtacccttcgtagccaaagttctagagtcgtgcgcgaggagttcagcattcaaacca
ccgaacccttggaccatgggattaatgaacgtgctagccgaacttcatcaagaacctgat
ttgaagttgaacctcaagtttgaaatagaagtgctttgtaaaaacttaagcttagacata
tcagacttaaaaccaactctgtacctgaaagatcctgagaagcatagactcatcgaattc
caactatccccaccaaagatgaataaggaaccacctgtaaatgttattcctatgaatcca
accattatacaggccccacagatgcaaatgatgccacctcagccaccaatgattcctgtc
gaagaaatgaccttgaccgtaccacctcctcctattggcatcgatccctctttaatggga
gtccttggaataccagagccccgtttcaattacttggacgtaaatgtcacctcaacctca
gcttttggacaaaaaatttgtttcaatcatcacattctcctattccaaacctatccccat
ttgaaacagtttgttaaacctgctatcgaaaggtctattcaagaatggattcacccagtc
gttgataggtctattaaatacgccctgactacgtgtgagcaaattatccgcaaagatttc
gccctagatccggacgagggacgcatgcgcacatgtgcccatcacatgatgcgcaacctg
actgcaggcatggctatgatcacatgccgggagcagatcatcagcaccatcagcaccaac
ctgaaagcagccttcctcacagcactcatgcctgctaatccacaacagcttgtgttccag
aaggatatagttgaaagtgcagcagctgttatagcaacagaaaacatggaattagcctgt
gcctttattcaaaaaacagccgttgaaaaagcattacccgaacttgataaacgtctaatg
aacgactatgaagttaggaaacaagctagactcgaaaaccggcgttattacgacccggtt
gtactgtcataccaaaccgaaaatcttcccgaacgagtgagactgcgcatgggaggacca
atggacatgcagattgctgtatatgaagaattcgcttgcaacattcctggcttcatgccc
gtgagagacgctggtatgttcattccaaaaccctcccaagaacaaattccacagctaact
tttagccaagttatgaatccaactcaagtgtatggtacagatgagatgggggctttgata
tcagctgccgagatgttcctgtccaatgcaatgaatacacagagttttccggttcaagct
accaatatgcacacccttcttgagtgtctcgtaattgcaagaagaaaccgtgatattgta
tctggttgtaacttactgcagagggctgttgaaggcttactcgatggccacattattcaa
tctggagtcaacgcagaacacgttgacctgatgacaagatatagagatattcacctgcgt
gtacttaagctcttggaagacgccagggtgtacggacatgtatggaccacgaagcagatc
acctgctgtctaacagagtgcagagatgagctgagatacaacattgaagccgttgattgc
ctcatccgcaatcatctcatcaatatgccacaatatgacttagccctcgctcacctgatg
gacaatggtaataattacgtagctgtagccttcgcaatgcagttggtgcaactgtatcta
gttgacgataggaacaacatcttcgtgaacgaatctgatttataccacacgaccgaaact
ttggtccgtatcatggcacatccccaacaacccccaccggagggtctggcgacattgatc
gaaacgttgagaataaatcaagatcctagtgcttaccttggagagagaatgccacttgga
cccacagcgcacatacacgctggtatcgcacaagtcaggaaccgcgaatatgacgacccg
cccggccttcaagagaagacagagaatgtgcttcgcgaatggcgtaccatgcttctcagc
ccgttgacggatgtcgaatttagccaaaacttcaacatttatgtgcaccgaatgaatatt
aacggaatattaaaatctgatgatatggtcacaagattcttccgtatcgcaactcagatg
tgcgtcgagaatgtgtaccaactgctgaacgaggaaaaagccaatcctccagcggtccca
aacaaacgggagaaatactacgtaatatgcgactctttcattaaactggtctctttactt
ataaagaacaccgccgacgccggcaatccaacacccaaactcaatctgttgaacaagatc
ttggggataatagctggttgcctgatgcaagatcatgatgaccccgggcatgaattccat
cagctgccgtaccaccgcttgctgatgatcctcttcctcgacatgaacatggctgaaccc
gtcttagaatctatgaattatcaggttctcactgcgttctgccatacgctacgcattatc
cgccctagcgtggcccctggcttttgctatgcctggctggaaatactatcacatcgcgca
ttcgtaaaccgagtgctcgctgtcactccacaacagaagttataccattgtttcattcag
ggctggggaatgtattcaacgctgctcatagatctattcaaattcctggacccattctta
agaaacacagaactagctccccccgtcatggcgctttacaaggggacacttaaagtgctc
cttgtattgcttcatgacttccctgaatttctttgcgattatcacttcggtttctgtgat
gaaataccccccaactgcatacaaatgcggaacttgatactatcggcgttcccgcgcaat
atgagactgccggaccccttcacgcccaacctgaaagtggacctgctctccgagatagcg
ctgtcgccccgagcagtcatcaactacgcaacaattatccccattacacaattcaagaag
gatctggacgcttacctcaaagccaggaccccagttaccttcctttctgagctaagaagc
aacatgcagttcccgcaggtggttaacgaacccggtcgccgttacaacacgcacctgttg
aatgctgtggtcctgtacgtcggagctcaggcgatcgcctacatcagatccaaggggcag
acaccaaacatgacgaccatcgcccactctgctcacatggatatattccagaacttcaca
gtcgactttgattatgagggacgttatctgttcttcaacgcaatcgccaatcagttgcgc
tacccgaacagtcatacgcactacttcagttgctgcctattatatctgttcgcggaagcc
aattctgaagctatacaagaacagatcactaggatgctactcgagaggctgattgtgaac
agacctcacccatggggcctccttatcacgttcatcgaactcatcaagaacccagtctac
aagttctggtcacatgagtttgttcattgcgcgcctgaaattgagaagcttgccaagcgc
cgcaatgccaccagcgaccaccagccagccctccacctcgtccgctctgcccaagcagtg
gaaccaactgttcaagtaaatcctttacaaggttttaactttaatgttggtgagggtcag
cagactatggtgaactcgcagcccaagtga
DBGET
integrated database retrieval system
