Papilio xuthus (Asian swallowtail): 106127471
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Entry
106127471 CDS
T07456
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106127471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxu03019
]
106127471
Messenger RNA biogenesis [BR:
pxu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106127471
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106127471
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
NOT1_connector
ARM_Cnot1
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
106127471
NCBI-ProteinID:
XP_013181004
UniProt:
A0AAJ6ZX33
LinkDB
All DBs
Position
Unknown
AA seq
2291 aa
AA seq
DB search
MVEPTDNLESSHKVLQSRLTSLGYDDLRLDPISKDLLIKHLRVEFPREKVPLVLTPLLYP
EDTQSPPMTMSSAEAMAAALRDAPLAEVIKDIGYSFTATLEDCKNNMLNFGGREPTATDV
ARIICMMVRYHTTVTDAPQIQTPGNFWRNHEGPRETAAPPPADCWNADVFVLTLKELASN
LNWKEVILQLDQPEFIVPDRQGLSLLFSILRSGLQSAGYPSNIFPVEYLCRRWTNLEGQM
TLICNMLKHPDVFSLADYPFHPVSVDMLKSPPEADNKEVATWRCLYLVELLLHAAERGHY
LQVHELFGFPLLHCPDVLMLVLIQINAPITAFRQELLSTLVPIFLGNHPNSGVILQRAWH
SQNPNIKPIIMHAMTEWYIRGDCDQSRLSRILDVAQDLKALSVLLNVQSLPFVIDLACLA
SRREYLKLDKWLTDKIREHGEIFVSAMMKFLQRRCPPVSGTGPEELPPKAALLSAETVAT
MATCLQLCAPGVAPDLQDALYAVAAHCQAWLLAKARLSAPAPSRPPFNAPFNSAFTSAFT
PAFTSAFTPHVDSMANLSTGVAGMALAMPTDTAFGLSGALGPVAPSPGSPSRLLGPGPNS
PYPMMALPHNANITNMAAFTRLSQVPSVDKFRLPDQINLPEIMHSVSKKVEDEANGYFQR
IYNHPPHPSLSIDEVLDMLKKFQESPNKREREVFSCMLRNLFEEYKFFPEYPDKELHITA
QLFGGIIERGLVPTYVSLGLALRFVLDALRKPSGSKMYYFGVTALDRFKARLKDYHKYCE
HVRAIPHFGDFPPHLADYVEYGLQGRDPPAAPLAAPLAPPPAARYAHHLVINIWSAAVAA
AAAGATAAAAAAAAAAALGGLGGRPSIASASNIDTLLTAREREAGPAAPPRHLQDKTAFI
FNNLSQLNLKAKCEELKEVLTEEHYPWLAQYIVMKRASLEFNFHALYSNFLDVLKAREVN
RLAIMETYRNIKVLLRSDKSIANFGDRSLLKNLGHWLGMLTLARNAPVLHRDIDLKALLL
EAYRKGQHELLYVVPFVAKILEACARSLIFRPPNPWTMSLMNVLAELNQEPDLKLNLKFE
IEVLCKNLGLELSELKPTLYLKDSEKHKVIELQLSQPKPSAEACQQPPPEPAPAPAPAPP
GPCPDAPLDIPEPRFSYVDVNVTSTTAFGQNITFNPQILLFQNYPHLKQFVRPAVERSIQ
EWIHPVVDRAISYALTACEHVVRKDFALEPDEARLRSSAHHMMRSLTAAMAMITCRDQLA
ATIAGNLKATFLSALLPAPPAPHAPHAHQHIIESAAAVLATENMELACAYIQKTAVEKAL
PELDKRLMNDYEIRKQARLENRLYYDPMVLSYQTENLPERVRPRMGGPTETQMAVYEEFG
RNIPGFAPTRDSALPARSSPAPSPPPPPPPGLALPPAVGPAQPLGGEEAAALVRAGEALS
SALGAHACPAQATNVHSLLECLVLATRNRDIVSACNLVQRAVEGLLESGCGEPGELAAGY
RELHVRVLRLAGEAGGGAWXXXXXRRHATARLLDARDDLRYNLDAVDCLVRNRLLDLPQF
DLALGQLMEEGNNRLAVGFAMRLVQLYLVDDRHNPFVRDSDLRHTTETLVRVAAQAQAHP
ALPALLEGLRVQREPGALLGGPAAHMHAALALARGRCGEEPAGLREKTESVLREWSNMLL
NPLTDVELAQNFSVYVHRMNMAGILACEDTLTRFLRIATQLCADTARRHLQDGAAGRDRC
YATCDAFAKLLALLVRTAAAPAPASGPAAPAPAAAAASAAPKLNLLNKVLGVLAARLLQD
HEAGGDFQPLPAYRLLLLLFLDMNVPEPVLEAMNYQVLTAFCHALRLVRPAAAPAFCFAW
LDLVAHRAFLXXXXXXXXXXQGWGMYAALLTELFKFLAPFLRNTELGAPVARLYRGTLRV
LLVLLHDFPEFLCDHYYDFCDEIPPNCIQMRNLILSAFPRTMRLPDPFTPNLKVDLLPEI
ALPPRSARDLAALLPPSRPRLRLSLDAYLDTRAPAAFPAELRAHLHADLHADEGVGAAEG
EGAARRYEPRLVNAVVAYVGARAVAALGARGLAPTLGTVAHSAHMDIFHSFIVDFDYEGR
YLFLNAVGDQLRYPNSHTHYFSCCLLHLWGVAGAAAREQVTRLLLERLVVNRPHPWGLLV
TFIELIKNPVYDFWSHDFVRCAPEIEKLFASVARSCVAEPPAPPYLFLNAVGDQLRYPNS
HTHYFSCCLLHLWGVAGAAAREQVTRLLLERLVVNRPHPWGLLVTFIELIKNPVYDFWSH
DFVRCAPEIEK
NT seq
6876 nt
NT seq
+upstream
nt +downstream
nt
atggttgagcccacagacaacctcgagagcagccataaagttttgcaaagtcgccttaca
agcctcggttatgacgaccttcgcctcgatcctatttccaaagatttgttaataaaacat
ttacgggttgaatttcctagagagaaagtgcccctcgtattgacaccgttgctgtatccg
gaagacacccagagcccaccgatgacgatgagctctgccgaggccatggcggccgccctg
cgcgacgcccctctggcagaggtcatcaaggacatcggttacagttttaccgccaccctt
gaggactgcaagaacaacatgttgaactttggcgggcgagagcccaccgcgaccgacgtc
gctcgaatcatttgtatgatggtgcgctaccacaccacggtgacggacgcgccgcagata
cagacgccgggaaacttctggagaaatcacgaagggccgagggagactgcggcgcccccg
cccgcggactgctggaacgcagacgtcttcgtgctcacgctcaaagaactcgcatccaac
ttaaactggaaagaagtcatattgcaactcgaccaaccggaattcatcgttcccgacaga
cagggcttgagccttttgttctcaatcctgcgctcgggactgcaaagtgcgggctatccc
tccaatatattccccgtagagtacctgtgtcggagatggaccaatctcgaaggtcagatg
actttgatatgcaatatgttgaaacaccccgacgtgttcagcctcgccgactatccgttc
cacccggtgtccgtggacatgctgaagtcgccgccggaggccgacaacaaggaggtggcc
acgtggcgctgcctgtacctggtggagctgctgctgcacgccgcggagcgcggacactac
ctgcaggtgcacgaactcttcggcttccctctgctgcattgccccgacgtcttaatgctc
gtcttgattcaaataaacgcaccgatcacggccttccgacaagaactattgtctactcta
gtaccgatattcttgggcaaccacccaaactccggtgtgatattgcaacgagcgtggcac
tcacaaaacccgaacatcaagcccataataatgcacgctatgaccgaatggtatatccgc
ggcgactgcgatcagtcccgcctgtccaggatcttggacgtcgcgcaggacctgaaggcg
ttgtcggtgctgctgaacgtgcagtccttgcccttcgtcatcgacctggcgtgcctcgcc
tcacgtcgggagtacctgaagctggataaatggttgacggacaaaatcagagaacatggt
gaaattttcgtatccgcaatgatgaagtttttacagagaagatgtccgccggtctcgggc
accgggcccgaggagctgccgcccaaggccgcgctgctgtcggccgagaccgtggccacg
atggcgacgtgtctgcagctctgcgcgcccggcgtggcccccgacctgcaggacgcgctc
tacgccgtggcggcgcactgccaggcctggctcctggccaaggcgcgcctctccgcgccg
gccccctcccgccctcccttcaacgcgcccttcaactccgctttcacctccgccttcacc
cccgccttcacctccgccttcaccccccacgtcgactccatggcgaacctcagcaccggt
gtcgccggtatggcattggccatgccgacggacaccgcattcggcttgtccggcgccctg
ggtccggtcgcgccctcgccgggatcgccttcacgactgttagggccggggcccaacagc
ccctatccgatgatggcgcttccgcacaacgccaacatcaccaacatggccgcattcacg
cgattgtcgcaagtcccgtcggtggacaagtttcggttgccggatcagatcaatctgccc
gaaataatgcatagcgtttcgaagaaagtcgaagacgaagcgaatggctactttcaacgg
atatacaatcatccgccccacccgtccctctccatagacgaggtgctggatatgctcaag
aagtttcaagagtcaccgaataaaagggagcgggaagtgttttcgtgcatgctgcgaaac
ctgttcgaggaatacaagttcttccccgaatatcccgataaggagcttcacataaccgcg
cagctgttcggcggcatcatcgagaggggcctggtgccgacctacgtgtccctgggtctg
gcgctgcgcttcgtgctggacgcgctccgcaagccctccggctccaagatgtactacttc
ggtgtcaccgccttggacaggttcaaggcgcgcctcaaggactaccacaagtactgcgag
cacgtccgcgccattccgcacttcggagactttcctccgcacctggccgactacgtggag
tacgggctgcagggtcgcgacccgcccgccgccccgctcgccgccccgctcgcaccaccg
cccgccgccaggtacgctcaccacctagttataaatatttggtcggcggcggtggcggcg
gcggcggcgggagcgacagcggcggcggcagcggcagcggcggcggcggcgctgggcggg
ctgggagggcggccgtccatcgccagcgccagcaacatagacacgctgctgacggcgcgg
gagcgcgaggcgggcccggccgcgccgccgcgacacctgcaggacaagacggccttcatc
ttcaacaacctcagccagctcaacctgaaagccaagtgcgaggagctgaaggaggtcctg
acggaggagcactacccctggctcgcgcagtacatcgtgatgaagcgggcctccttggaa
ttcaacttccacgccttgtactccaacttcctcgacgtgttgaaagctcgggaggtgaac
agattggcgataatggagacttatcggaatataaaagtgttgttgcgttccgataaaagt
atagccaacttcggcgaccgctcgctcttgaagaacctcggccactggctgggcatgctg
acgctggcgcgcaacgctccggtgctgcaccgcgacatcgacctcaaagcgctgctgctg
gaggcgtaccgcaagggccagcacgagctgctctacgtcgtgcccttcgtcgccaagatc
ctcgaggcctgcgccaggagcctcatattcaggccgccgaacccctggacgatgtccttg
atgaacgtcctcgccgaactcaaccaggaacccgatctaaagttgaatttaaaatttgaa
atagaagtgctgtgtaaaaatctgggcttggaactgtcagagttgaaacccacgttatac
ttgaaggactctgaaaagcacaaggttatagagctccagctctcgcagccgaagccgagc
gcggaggcctgccagcagccgccgcccgagcccgcgcctgcgcccgcgccggcgccaccg
gggccctgccccgacgccccgctcgacatcccggagcctcgatttagttacgtggatgta
aacgttacttcgacgacggcattcggacagaacatcaccttcaatcctcaaatactttta
ttccaaaactacccccacttgaagcagttcgtccgaccggccgtggaaaggtccattcag
gaatggatccacccggtggtggaccgcgccatcagctacgcgctgactgcgtgcgagcac
gtggtccggaaggacttcgccctggagccggacgaggcgcgcctgcgctcctccgcccac
cacatgatgcgcagcctcaccgccgccatggccatgatcacctgccgcgaccagctcgcc
gccaccatcgccggcaacctgaaggccaccttcctgagcgcgctgctgccggccccgccc
gcgccgcacgcaccgcacgcgcaccagcacataatcgagagcgctgcggccgtgctggcc
acggagaacatggagctggcgtgcgcctacattcagaaaaccgccgtggagaaggccctg
cccgagctggataagcgactcatgaacgactacgagattagaaagcaggctcggctcgaa
aaccgactctactacgacccgatggtactgtcatatcaaactgagaaccttccagagaga
gtgaggccgagaatgggggggccgactgagacgcaaatggcggtctacgaggagttcggt
cgcaacatcccgggctttgcgcccacgcgggactccgcactcccggcccgctcctccccc
gcgccttcgcccccgcccccgcccccacccggcctggcgctgccccctgcggtgggaccg
gcgcagccgctgggcggcgaggaggcggcggcgctggtgcgcgcgggcgaggcgctgtcg
agcgcgctgggagcgcacgcgtgcccggcgcaggccaccaacgtgcactcgctgctggag
tgcctcgtgctcgccaccaggaaccgggacatcgtctccgcctgcaacctggtgcaaagg
gcggtggagggcctgctggagagcgggtgcggcgagccgggcgagctggcggcggggtac
cgcgagctgcacgtgcgcgtgctgcggctggcgggcgaggcgggcggcggcgcctgggnn
nnnnnnnnnncccgccggcacgccaccgcgcgcctgctcgacgcgcgcgacgacctgcgc
tacaacctggatgccgtcgactgcctcgtgcgcaaccgcctgctggatctgccgcagttc
gacttggcgctcggacagctaatggaggagggcaacaaccggctcgcggtagggtttgcc
atgcggctggtgcagctgtacctggtggacgaccgccacaacccgttcgttcgcgactcc
gatctccgccacacgacggagacgctggtgcgcgtggcggcgcaggcgcaggcgcacccc
gcgctgcccgcgctgctggagggcctgcgcgtgcagcgagagcccggcgcgctgctcggc
ggccccgcggcgcacatgcacgcggcgctggcgctggcgcggggccgctgcggcgaggag
ccggcgggtctacgcgagaagaccgagagcgtgctgcgcgagtggagcaacatgctgctc
aacccgctgacggacgtcgagttggcacagaacttcagcgtgtacgtgcaccgcatgaac
atggccggcatcctggcctgcgaggacacgctcacgcgcttcttgcgcatcgccacgcag
ctgtgcgccgacaccgcgcgccgccacctgcaggacggcgccgccggccgcgaccgctgc
tacgccacctgcgacgcattcgccaagctgctggcgctgctggtccgcaccgccgccgcc
cccgcccccgcctccggccccgccgcacccgcccccgccgccgccgccgccagcgccgcg
cccaagctcaacctgctcaacaaggtgctgggcgtgctggcggcgcgcctgctgcaggac
cacgaggccggcggtgacttccagccgctgcccgcgtaccgcctactgctcctgctcttc
ctcgacatgaacgtgccggagcccgtgctggaggccatgaactatcaggtgctgacggcg
ttctgccacgcgctgcggctggtgcggccggcggcggcgcccgccttctgcttcgcctgg
ctggacctggtggcacaccgcgccttcctnnnnnnnnnnnnnnnnnnnnnnnnnnnnngg
caggggtggggcatgtacgcggcgctgctgacggagctgttcaagttcctggcgccgttc
ctgcgcaacacggagctgggcgcgcccgtggcccgcctgtaccgcggcacgctgcgggtg
ctgctcgtgctgctgcacgacttccccgagttcctctgcgaccactactacgacttttgc
gacgagatcccgcccaactgcatccagatgcgcaacctcatcctgtccgcgttcccgcgc
accatgcgcctgcccgaccccttcacccccaacctcaaggtggacctgctgcccgagatc
gcgctgccgccgcgctccgcccgcgacctcgccgcgctgctgccgccctcgcgccctcgt
ctccgcctcagcctcgacgcctacctggacacgcgcgcgcccgccgccttcccggccgag
ctgcgcgcccacctgcacgccgacctgcacgcggacgagggcgtgggcgcggccgagggc
gagggcgcggcgcggcgctacgagccgcggctggtgaacgcggtggtggcgtacgtgggc
gcccgcgccgtggccgcgctgggggcgcgcgggctggcgcccacgctgggcacggtggcg
cactcggcgcacatggacatcttccacagcttcatcgtggacttcgactacgagggacgc
tacctgttcctgaacgcggtgggggaccagctgcgctaccccaacagccacacgcactac
ttcagctgctgcctgctgcacctgtggggggtggcgggcgcggctgcgcgggagcaggtg
acgcggctgctgctggagcggctggtggtgaaccggccgcacccctggggcctgctcgtc
accttcatagagctcatcaagaacccggtctacgacttctggtcgcacgacttcgtccgc
tgcgcgcccgagattgaaaagttgttcgcgtccgtggcgcggtcgtgcgtggccgagccc
cccgcgcccccctacctgttcctgaacgcggtgggggaccagctgcgctaccccaacagc
cacacgcactacttcagctgctgcctgctgcacctgtggggggtggcgggcgcggctgcg
cgggagcaggtgacgcggctgctgctggagcggctggtggtgaaccggccgcacccctgg
ggcctgctcgtcaccttcatagagctcatcaagaacccggtctacgacttctggtcgcac
gacttcgtccgctgcgcgcccgagattgaaaagtga
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integrated database retrieval system
