Pseudobutyrivibrio xylanivorans: FXF36_08565
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Entry
FXF36_08565 CDS
T06217
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pxv
Pseudobutyrivibrio xylanivorans
Pathway
pxv03420
Nucleotide excision repair
pxv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pxv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FXF36_08565
03430 Mismatch repair
FXF36_08565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxv03400
]
FXF36_08565
Enzymes [BR:
pxv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FXF36_08565
DNA repair and recombination proteins [BR:
pxv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FXF36_08565
MMR (mismatch excision repair)
Other MMR factors
FXF36_08565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
DEAD
Glu_cyclase_2
Motif
Other DBs
NCBI-ProteinID:
QFJ54907
UniProt:
A0A5P6VQM9
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All DBs
Position
1:complement(1880001..1881848)
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AA seq
615 aa
AA seq
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MTEKEFLDKYASSLNVQQLEAIKTIDGPVLLLAVPGSGKTTVLVNRLGYMIYCKGIAPEN
ILTLTYTVAATKDMSQRFEKIFGSELSDRLEFRTINGICAKVIAYYGRMIGKSAFELCSD
EKDTGRLLSNIYLQVMRDYPTESDIKMLRTQITYCKNMCLPAEDIKKLGKENDIDLLRIY
DKYNAELKAQSLMDYDDQMVYAYKILKASPVVLNYFQNQYKYICVDEAQDTSKIQHMIIS
LLAGKSGNLFMVGDEDQSIYGFRAAYPEALLNFEEEHIGAKVLVMDKNYRSNANIVQAAD
IFIQHNKERHKKHICPTKAANSNLNIVSIEREAQYVYLKKVAEQTATRTAVLYRDNESVL
PLVDILERERIPYNIKNMDMTFFSHRVVLDIVNILRFAFVPMDEEVFMKIYYKLQAYISK
SAALEMCMQAEIHHSGILEAAELIDLNPHVLGNCRSLRTHFKNMANESPYKAIIRITDYM
GYGEYLANNNIDDNKIFILKMLAKKEKDIPSFLNRLTELRQILLEKEHVLGCKFVLSTIH
SSKGLEYDSVFLIDSINGVFPNKVVRNMEKATAQEKKDFEEERRIFYVGITRAKDNLTIF
KYKNKPSIFIKELNA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaaagaatttttagataaatacgcatcgtctctaaacgtacaacagctggag
gccattaaaacaattgatggaccggtgcttcttttagctgtgcctggaagtggaaagact
acggtgcttgtgaaccgcctgggttacatgatttattgcaagggtattgcaccggaaaat
atcctcacgcttacatacacagtagccgctacgaaggatatgtcccaaagatttgaaaag
atttttggttcggagctttcagacaggcttgagtttaggacaattaatggtatatgtgcc
aaggtgatagcttactatggtcgcatgattggaaaatcggcctttgagttgtgctcagat
gaaaaggatacaggtcgtctccttagtaatatatatcttcaggtgatgagggactaccca
actgagagcgatattaaaatgctaagaacgcagattacctattgcaaaaatatgtgcctt
ccagctgaggacataaagaagcttggtaaagagaatgacatagatttattacgtatatac
gataaatacaatgcggagcttaaagcccagagtctaatggactacgatgatcagatggtt
tatgcatataagattctgaaggcttcgccggtggttttgaattattttcagaatcagtat
aagtatatctgtgtggatgaggcacaggatacctcaaaaattcagcatatgattatttct
ctgttggcagggaagtcaggaaatcttttcatggttggagatgaggaccagagtatttat
ggatttagggcagcttatccagaggcacttttgaactttgaggaggaacatattggagct
aaggttcttgttatggacaagaattatcgttccaatgcaaatattgttcaggctgcagat
attttcattcagcataataaggaaagacacaagaagcatatatgtcccacaaaggcggcc
aatagtaatctaaatatagtgagcatagaacgcgaggcgcaatacgtatatctgaaaaaa
gtggcggagcagacagctaccagaaccgctgtattatatagagataatgaaagtgtatta
ccgctggtggatattctagagagagaaagaattccatataatatcaagaacatggacatg
actttctttagccatagagtggtgcttgatattgtgaatattcttcggtttgcctttgtg
ccaatggatgaagaggttttcatgaaaatctattacaagctgcaggcatatatcagcaaa
agtgctgcacttgaaatgtgtatgcaggcagagattcatcattcaggaatactagaggca
gcagaactgattgatttgaatcctcatgtgcttggtaattgccgttcgctgagaacccat
tttaagaacatggcaaatgaatcaccttacaaggctataataagaattacagattatatg
ggctatggtgagtatcttgcaaacaataatattgatgacaataagattttcatcctgaaa
atgcttgcaaaaaaagaaaaagatattccatcgtttttaaatagattgacagagctcagg
cagattcttttggaaaaggagcatgtgttaggttgtaaatttgtattgtctactattcat
tctagcaaaggtcttgagtatgactcagtatttttgattgattccataaatggggtattt
ccaaataaggttgtgcgaaacatggaaaaagccacggctcaggagaagaaggactttgaa
gaagagcgaagaatcttttatgttggaatcacccgcgcaaaggataacctgactattttc
aagtataaaaacaagccttctatcttcatcaaggagcttaatgcctga
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