Plutella xylostella (diamondback moth): 105392705
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Entry
105392705 CDS
T03915
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pxy
Plutella xylostella (diamondback moth)
Pathway
pxy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105392705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxy03019
]
105392705
Messenger RNA biogenesis [BR:
pxy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105392705
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105392705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
105392705
NCBI-ProteinID:
XP_037978143
LinkDB
All DBs
Position
Z:10402065..10421868
Genome browser
AA seq
2382 aa
AA seq
DB search
MNLDPLTFSLSQIKFLVTNLTKKNFKQTSQELTQLVSLHGLEAENQLLRCLFTEAAKTSW
DTDRFGSTSGITVHSSLLAQYLASLLNHPARSTVVCRAVDQPARSLQKILKPSNTLLNRL
SRLLKLTTAEDVAFSLVLRTSSKPEFANLTKQHLKRRFLDLVQCYLDADQSDRAGLQECS
PEVLQILLSSLALENFRLAPVTKDLFLKRLRADFPREVVPIILAPLLYPDDTQSPLEEMT
TADDMTTAMMDNSLADIIRDIGYAFTSSVEECKNSMLNFGAREPTAIDVARIISMMVRYH
ALMPDTTQLQTPGNFWMSHDQKKDGSIHGHGGETWNAEVFVQTLKELASNLNWKEVILQL
DHPECIIPDRQGLSLLFTILRLGLQSAGYPANIFPVEYLCRRWTNLEGQMSLISLILKYP
EIFSFADHPFHPVSIDILKSPPETDNKEIATWRCLYLVELLLYAAERGYYMQVHELFKFP
LQHCPDVLLLALLQISPPMTVFRQELLTTLIPIFLGNHPNSGIILHHAWHTQNPNIKPII
MHAMADWYIRGESDQSKLSRILDVAQDLKALSLLLNVQSFPFVIDLACLASRREYLKLDK
WLTDKIRDHGETFVSAMVKFLQRRCPPVIGKIPEEQLPKAAQLPPETITTMMACLQLCAQ
NVQPELQDAIYSVMANCQTLILTKTRQTIAGMPRPHRVLETPFNPLFTPHTVDPISSLTP
NVANMNLGAPAQTAFAMPGTLGPLVTTPGSPSRLMGAGPNSPFAMIPLQQNVPNIGALTR
MPPAQPLDKPRLQDPINFPEMMHNVSKEIEDEANGYFQRIYNHPPHPTLSIDEVLDMLKK
FQDSPNKREREVYTCMLRNLFEEYKFFPQYPDKELHITAQLFGGIIEKGLVPSYVSLGLA
LRFVLEALRKPEGSKMYYFGIAALDRFKSRLKDYHKYCEHVRAIPHFNEFPPHLIEYIEY
GLQSQEPPTKPQGAVLPTSLAAILNQSAVATVSAPYRAAVCAPSSISVMSKVSSGGGGLG
SRPSIANATNIDTLLTATGEDKITAPPEAIQDKTAFIFNNLSQLNLQTKCEELKEIITEE
YFPWLSQYLVMKRASIELNFHALYSNFLDVLKIREINKMVTKETYRNIKVLLRSDKGIAN
FSDRSLLKNLGHWLGMLTLARSEPILHIDIDLKALVLEAYHKGQQELLYVVPFVAKVLES
CAKSIVFKPPNPWTMALMNVLAELHQEPDLKLNLKFEIEVLCKNLNLDITDLKPAIYLKD
PERLRQIEFQLSQPKHKAAAAAAAAAAAAAAAEAAAAGGMQGAPPAPPQQLMMEELPPPA
PPTPGLPPPDPALCGVVGLPEPRFNYLDVNVSSTSAFGQKICFNPHIILFQNYPHLKQFV
KQAIERSIQEWIHPVVDRSIKYALTTCEQIIRKDFALDPDEVRMRTCAHHMMRNLTAGMA
MITCREQIITTISTNLKTAFLSALLPATPQQKEIVESAAAVLATENMELACAFIQKTAVE
KALPELDKRLMNEYEMRKLARQEGRRYYDQMLTYQTERIPERVRLRAGGPSDSQITVYEE
FACNIPGFVPVRDAGMFIPKPAVQEPMPQLTFSQVMNAAQMYGNDEMTGLITAAELFLAN
TIGSAALAVQAANMHSLLECLVMARRNHDIVSGCTLLQKAVEGLLDGHVVQPGASSEHLE
MMTRYRDIHIRVLKLLEDARVYGQVWTVKQITCCLTECREELRYNLEAVDCLIRNHLCNL
RQYDIALAHMMDNGNNYMAVAFAMQLVQLYLVDDRNNIYANESDFYHTTDMLIRITSHSR
QPPPEGLAALIEMLRMNQDPSAYLGERSPLGPTAHIHSGILQVRARDYDDPPGLQEKTEN
LLREWRSVLLSPLTEIEIAQNFNLYVHRMNMNGILKSDDMITRFFRIATQMCIENVYQQL
SEERLNAPPAPPKREKYYGMCDSFIKLVSLLIKNTGDGGNPTPKLNLLNKILGIVAGCLL
QDHEEHSTNFQQLPYHRVLLILFLDMNMAEPVLESMNFQVLTAFCHTLRIIRPNIAPGFC
YAWLELVAHRAFINRVLAVTPQQKGWGMYSTLLIDLFKFLDPFLRNTELAGPVMVLYKGT
LKVLLVLLHDFPEFLCDYHYGFCDEIPPNCIQMRNLILSAFPRNMRLPDPFTPNLKVDLL
AEITLPPRAVINYATLIPSPQFKKDLDAYLKARAPVTFLSELRSNMQVLNDPGRRYNSQL
MNAVVLYVGTQAIAHIRSKGQTPNMSTIAHSAHMDIFQNFTVDFDYEGRYLFLNAIANQL
RYPNSHTHYFSCCLLYLFAEANSEAVQEQITRMLLERLIVNRPHPWGLLITFIELIKNPI
YKFWSHDFVHCAPEIEKLFASVARSCIVDKSGAGGGEREMVE
NT seq
7149 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggaccctttaacttttagcttatctcaaataaagtttctcgttacaaatcta
acgaagaaaaacttcaagcagacaagccaagaattaactcagctcgtcagcctacatgga
ttggaagccgagaaccagctactgaggtgtctgtttactgaggcagcaaagacatcctgg
gacactgaccgcttcgggagtaccagtggcatcactgtccactcctctctcttggcacag
tacttggcatcattgttgaaccatccagctcggtccactgtagtctgccgagccgttgac
caaccagcccgctccctacagaagatattgaaaccttccaacaccctattgaaccgactg
tcgagactactgaagttgacaacagctgaagatgttgccttctcgttggtattgaggacc
tcttcgaagccggagttcgcaaacctcacgaagcaacatttgaagcggcgatttctagac
ctcgtgcagtgctatctcgatgccgatcaatcggatcgcgccggcctccaagaatgcagt
cctgaagtattgcagatcttgttgagcagcctcgcgctcgagaactttcgactcgcaccc
gtgaccaaggacttattcctcaagcggttgagggcagatttcccccgcgaagtcgtgccc
atcatactcgcccccctactgtaccccgacgacacccagtcgcccctggaggagatgacc
acagctgacgacatgaccaccgcaatgatggacaactcgttggccgacatcatccgcgac
atcggatacgccttcacctcatcggtggaggagtgcaagaatagcatgttgaactttgga
gccagagagccaactgctatcgatgtagccaggatcatctccatgatggtccggtaccac
gccctcatgccggacacgacccagctgcaaacacccggtaatttctggatgagtcatgat
cagaagaaggatggaagtattcatggtcatggcggtgaaacttggaatgctgaagtgttt
gtacagacactgaaggagttggcctctaacctgaattggaaagaagtcatccttcaactg
gatcaccccgaatgtatcataccggacagacaaggactaagtctgctctttaccatcctc
agacttggactccaaagtgctggttacccagccaacatattccccgttgaatatctatgt
cgacggtggacaaatctagaaggacagatgagtttgattagtttgatactgaaatatcct
gagattttcagtttcgctgatcatccattccaccccgtgtcaattgacatactgaagtca
ccacctgaaacagacaacaaggaaatagcgacttggaggtgtttgtatcttgttgagctc
ctcctgtatgcagcagagagaggctactacatgcaagtgcatgagctattcaagttcccg
ttgcagcactgccctgacgtcctactactggccctgctgcaaatcagtcccccaatgact
gtcttcagacaagaactgctcactacacttatacctatattcctaggaaaccatccaaac
tctggcatcatcctgcatcacgcctggcacacgcagaaccctaacatcaagccgatcatc
atgcacgctatggcagactggtatattcgtggtgagagtgaccaatctaaattgtctaga
atattggatgtagcacaagatctcaaggccctgtcgctattgctgaacgtgcagtctttc
ccgttcgtcatcgatctggcgtgcctcgcctccagaagagagtatctgaagctggacaag
tggttgacagacaagatacgagaccacggagagacgttcgtgtctgcgatggtgaaattc
ctacaaagaagatgtcctcctgtcataggaaagattcctgaagagcaactgccgaaagcg
gcgcaactccctcccgagaccatcaccacgatgatggcgtgcctgcagctgtgcgcgcag
aacgtgcagcccgagctgcaggacgccatctactccgtcatggccaactgccagaccctc
atcctgaccaagactcgccagaccatcgccggcatgccgcgcccgcaccgcgtgctcgag
acaccgttcaacccgctgttcacgcctcacacagtggaccctatatcgagcttgacgccg
aacgtggcgaatatgaacctgggtgcgcccgcgcagacggccttcgccatgccgggcacg
ctgggcccgctggtgacgacgccgggctcgccgtcgcgcctcatgggcgccgggcccaac
agccccttcgccatgatcccgcttcagcagaacgtgcccaacatcggcgccctcactcgc
atgccgcccgcgcagccgctggacaagccgcgcctgcaggaccccatcaacttccccgag
atgatgcacaacgtctccaaggagatcgaggacgaggcaaacggctacttccagaggatc
tacaaccacccgccgcaccccacgctgtccatcgacgaggtgctcgacatgctcaagaag
ttccaggactcgcccaacaagagggaacgcgaggtctatacttgtatgcttcgtaatctc
ttcgaggaatacaagttcttccctcagtatcctgataaggaattgcatattactgcgcaa
ctctttggaggtatcatagagaaaggactagtgccgagctacgtgtcgctaggcctcgct
ttgagattcgtacttgaagctctaaggaaacccgaaggatctaagatgtactatttcggt
atagccgcactggatcgttttaaatcccgcctcaaagactaccacaaatattgcgagcac
gtcagggctataccgcatttcaatgaattccctccccacctgattgagtacattgaatat
ggattgcaaagtcaggagcctccaacgaagcctcaaggggctgttctgccaacaagtctc
gctgccatcctcaatcagtctgcggtggcgaccgtctccgctccttacagggctgcggtg
tgcgcgccatcatccatctccgtgatgtcgaaggtgtcgagcggcggcggcgggctcggc
tcgcgaccctccatcgccaacgccaccaacatcgacaccctgctcaccgccaccggggag
gacaagatcaccgcgcccccagaggccatccaggacaagaccgccttcatcttcaacaac
ctcagccaactcaacctgcagacgaagtgcgaggaactcaaggaaatcatcaccgaagaa
tacttcccctggctgtcacagtacttggtcatgaagagggcctccatagagctcaatttc
catgccttgtattccaacttcctcgatgtgctgaaaatcagggagatcaacaaaatggtt
acgaaagaaacgtaccgcaacatcaaagtgttactgcgatccgacaagggcatcgccaac
ttctcggaccgatccctgctcaagaacctgggccactggctcggcatgctgacgctggcg
cgcagcgagcccattctgcacatcgatatcgatctcaaagcactggttctcgaagcctat
cataaggggcaacaagagctcctgtatgtagttcctttcgttgcgaaggtcctggaatcc
tgtgctaaaagcattgtcttcaagccacccaacccgtggacaatggcactgatgaatgta
ttggccgagctacatcaggagcccgacctcaaacttaatcttaagttcgagatcgaagtg
ctttgcaagaacctcaacttggatatcactgacttgaagccagcgatttacttgaaagac
ccggaacggctgaggcagatagagttccaactgtcacagccgaagcataaggcggcggcg
gcggcggcggctgcagcggctgcggcggcggcggcggaggcggcggcggcgggcggcatg
cagggcgcgccgccggccccgccgcagcagctcatgatggaggagctgcccccgcccgcg
ccgcccacccccggcctgcccccgcccgaccccgcgctgtgcggcgtcgtgggcctgccc
gagccgcgcttcaactacctcgacgtcaacgtctcctccacctccgccttcggacagaag
atctgcttcaacccgcacatcatcctgttccaaaactacccgcacctcaagcagttcgtg
aagcaggcgatcgagcgctccatccaggagtggatccacccggtggtggaccgctccatc
aagtacgcgctcacgacgtgcgagcagatcatccgcaaggacttcgcgctggacccggac
gaggtgcgcatgcgcacgtgcgcgcaccacatgatgcgcaacctcaccgccggcatggcc
atgatcacgtgccgcgagcagatcatcaccaccatcagcaccaacctcaagacggccttc
ctgtcggcgctgctgcccgccacgccccagcagaaggagatcgtggagtcggcggcggcc
gtgctggccacggagaacatggagctggcctgcgcgttcatccagaagacggccgtggag
aaggctctgccggagctggacaagcggctcatgaacgagtacgagatgcgcaagctggcg
cgccaggagggccggcgctactacgaccagatgctgacgtaccagacggagcgcatcccc
gagcgagtgcgcctgcgcgccggcggcccgtccgacagccagatcacagtgtacgaggag
ttcgcatgcaacatccccggcttcgtgcccgtgcgcgacgccggcatgttcatccccaaa
cccgccgtgcaggaacccatgccgcaactcaccttcagccaggtgatgaacgccgcgcag
atgtacggcaacgacgagatgacgggcctcatcacggccgccgagctgttcttggctaac
accatcgggtcggccgcgctggctgtgcaggccgccaacatgcactcgctgctcgagtgc
ctcgtcatggccaggcgcaaccacgacatcgtgtccggatgcacactgctgcagaaggct
gtagaaggtctgttggacgggcacgtagtgcaaccaggcgccagcagcgagcatctcgag
atgatgaccagatacagagacatccacattcgcgtcctcaagctgttagaggacgcccgc
gtctacggacaggtctggacggtcaaacagatcacctgctgcctcacggaatgcagggaa
gaactgagatacaatttggaggcagtcgactgccttatcaggaaccatctttgcaatttg
agacagtacgacatcgcgctcgcgcacatgatggacaatggcaacaactacatggcggtc
gctttcgccatgcaactagtccagctatacttggtcgacgacaggaacaacatttacgcc
aacgagtctgacttctaccacacgaccgacatgttgatccgcatcacgtcgcactcgaga
cagccgccgccagaggggttggccgcgctcattgagatgctgcgaatgaaccaggaccca
agcgcgtaccttggggaacgctcgcctctgggccccaccgctcacatccattccggcatc
ttgcaagttcgggcccgcgactacgacgaccctcccggcctgcaagagaagaccgagaac
ttgctccgcgagtggcgcagcgtcctgctcagcccgctcaccgagatcgagattgcacag
aatttcaacctctatgttcaccgcatgaacatgaatgggatattgaaatccgacgacatg
atcacccgtttcttccgcatcgcgacacagatgtgcattgagaacgtttaccagcagttg
agtgaggagagattgaacgcgccgcccgcgccccctaaaagggagaagtactatggcatg
tgcgattcgttcatcaagttggtatcgctcttgatcaagaacactggcgacggcggcaac
ccgacgcctaaactcaatctgttgaataagatactgggcatcgtcgcggggtgtctcctt
caggatcacgaggagcatagcaccaacttccagcagctgccctaccaccgagtgctgctc
attctcttcctcgacatgaacatggccgagcctgtcttagaatctatgaatttccaggtt
ctaactgcattctgtcacacgctgcgcatcatccgtccgaacatcgcgccgggcttctgc
tacgcgtggctcgagctggtcgcgcaccgcgccttcatcaaccgcgtgctcgccgtcacg
ccacagcagaagggctggggcatgtactcgacgctcctgattgacctgttcaagttcctg
gacccgttcctgcgcaacacagagctggccggcccggtcatggtcctgtacaagggcacc
ctcaaagtgctcctagtactcctccatgacttccccgagttcctctgtgactaccactac
gggttctgcgatgagattccgccgaactgcatccaaatgaggaacctcattctgtctgcg
ttcccgaggaatatgcggctgcctgacccgttcactccgaacctgaaggtggacttgctg
gctgagatcacgctgccgcctcgtgctgttattaactatgccacgctgatcccgtcgccg
cagttcaagaaggatcttgacgcgtatctgaaggctcgcgcgcccgttactttcctctct
gaactgaggagcaacatgcaggtgctgaacgacccgggccgccgctacaactcgcagctc
atgaacgcggtggtgctgtacgtgggcacgcaggccatcgcccacatccgctccaagggg
cagacgcccaacatgagcaccatcgcgcattccgcccacatggatatcttccagaacttt
actgttgacttcgactatgagggcagatatctattcctgaacgcgatcgccaaccagctc
cgctatccgaacagccacacgcactacttcagctgttgcctcctgtacctattcgctgag
gccaactccgaggctgtacaggagcagatcacgaggatgcttctggagcggctgattgtg
aaccgcccgcacccgtggggccttctcatcacgttcatcgagctgatcaagaacccgatt
tacaagttctggtcgcacgacttcgtgcattgcgcgcctgagatcgagaagctattcgca
tccgtggcgcgttcctgcatcgtcgacaagagcggtgcgggagggggagagcgggagatg
gttgagtag
DBGET
integrated database retrieval system
