Paracoccus yeei: A6J80_05490
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Entry
A6J80_05490 CDS
T04781
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pye
Paracoccus yeei
Pathway
pye03410
Base excision repair
pye03430
Mismatch repair
pye03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A6J80_05490 (recJ)
03430 Mismatch repair
A6J80_05490 (recJ)
03440 Homologous recombination
A6J80_05490 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pye03400
]
A6J80_05490 (recJ)
DNA repair and recombination proteins [BR:
pye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
A6J80_05490 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A6J80_05490 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A6J80_05490 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
ARC35912
UniProt:
A0A1V0GPY3
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All DBs
Position
618880..620619
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AA seq
579 aa
AA seq
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MTAFLSVSSSLTGRLWRGPEPGLERAAEALAQDSRLPLPVSRVLASRGVAPHDCAAYLEP
RLRDLLPDPLTLRDMAPAAERIVAAVQAGQRIAIFADYDVDGGASAALLIDWLRRQGRDA
TLYIPDRIDEGYGPNAPAIAGLSAGHDLIVCVDCGTLSFDALAAATCDVIVLDHHQGIET
LPPAVAVVNPNRMDEDGSLGHLCAAGVVFLTLVQCNRLLRERGLPQPDLICLLDLVALAT
VADVAPLVGVNRAFVRQGLAIMARRERPGLVALADVARMDAAPSAFHLGFLLGPRINAGG
RVGRADLGAQCLACTDPARAIRYAEELDQLNRDRRAIEAAVREAALAQVEARDPGLVAWA
AGAGWHPGVVGIVAARLKEATNLPSVVIGVEHGIGKGSARSVPGVDLGRAIHRLAAEGLL
LKGGGHAMAAGLTVEEAAIPAAMQRLSELLARELADRSGAHELRISGLLDPAGATVELMQ
MLERAGPYGQAAPAPRFAFADQLIDSAATMGDSHLRLRFRSPGSPPVDAVAWGAMSGPLG
PALLGARGRRFHLAGKLELSQWGGRERVRLRLDDAAPAG
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttttctttccgtctcctcctcgctgactggccggctgtggcgcgggcccgaa
cccgggctcgagcgcgcggccgaggcgctggcccaggacagccgcctgcccctgcccgtc
agccgcgtcctcgcctcgcgcggggtcgcgccgcacgactgcgccgcctatctggaaccg
cggctgcgcgacctgctgcccgatccgctgaccctgcgcgacatggcgccggccgccgaa
cggatcgtcgctgccgtgcaggccggccagcgcatcgccatctttgccgattacgacgtg
gacggcggcgcctcggccgcgctgctgatcgactggctgcgccgtcaggggcgtgacgcg
accctctacatccccgaccgcatcgacgaggggtatggcccgaatgccccggccatcgcc
gggctttcggcgggccatgacctgatcgtctgcgtcgattgcggcacgctgagctttgat
gccctggccgccgccacctgcgacgtgatcgtcctggaccatcaccagggcatcgagacg
ctgccccccgccgttgccgtggtgaaccccaaccgcatggacgaggatggcagcctgggc
catctctgcgccgccggcgtggtgttcctgacgctggtgcagtgcaaccgcctgctgcgc
gaacgcggcctgccgcagcccgacctgatctgccttctggacctcgtggcgctggcgacg
gtggcggacgtggcgccgctggtcggcgtcaaccgcgcctttgtccggcagggcctggcg
atcatggcgcggcgcgaacggcctgggctggtcgccctggccgatgtggcgcgcatggac
gccgcccccagcgcctttcacctgggcttccttctggggccgcggatcaacgcgggcggg
cgcgtggggcgcgccgacctgggcgcgcaatgcctggcctgcaccgatcccgcccgcgcg
atccgctatgccgaggaactggaccagctgaaccgcgaccgccgcgccatcgaggccgcc
gtgcgcgaggccgccctggcccaggtcgaggcgcgcgaccccggcctggtcgcctgggcc
gccggcgcgggctggcacccgggcgtggtcggcatcgtcgccgcccgcctgaaagaggcg
accaacctgccctcggtggtgatcggggtggagcacggcatcggcaagggctcggcccgg
tcggttccgggggtggacctgggccgcgccatccatcgcctggcggccgaggggctgctg
ctgaagggcggcggtcacgccatggccgccgggttgacggtcgaggaagcggcgatcccc
gccgccatgcagcggctgtccgaactgctggcgcgcgaactggccgaccgcagcggcgcg
catgagctgcgcatctcgggcctgctggacccggcgggcgccacggtcgagctgatgcag
atgctggagcgcgccggcccctatggccaggccgcgcccgcgccgcgcttcgcctttgcc
gaccagctgatcgacagcgccgccaccatgggcgacagccacctgcgcctgcgctttcgc
agcccgggcagcccgcccgtcgatgccgtcgcctggggcgccatgtcgggccccttgggc
cccgccctgctgggcgcgcggggccggcgctttcacctggcgggcaagctggagctgtcg
caatggggcggccgcgaacgcgtgcggctgcgcctggacgacgccgctccggcgggctga
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