Paenibacillus yonginensis: AWM70_17685
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Entry
AWM70_17685 CDS
T04810
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pyg
Paenibacillus yonginensis
Pathway
pyg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pyg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWM70_17685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyg03019
]
AWM70_17685
03009 Ribosome biogenesis [BR:
pyg03009
]
AWM70_17685
Enzymes [BR:
pyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AWM70_17685
Messenger RNA biogenesis [BR:
pyg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AWM70_17685
Ribosome biogenesis [BR:
pyg03009
]
Prokaryotic type
rRNA helicases
AWM70_17685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANS77311
UniProt:
A0A1B1N7C7
LinkDB
All DBs
Position
complement(3876435..3877847)
Genome browser
AA seq
470 aa
AA seq
DB search
MNEILKKQGIGVPTPVQEQALPVLLAGEDVIAQAQTGTGKTLAFLLPIIEKIDLRKNHPQ
ALVILPTRELAIQVTAEARKLAAAKPGLQLLAAYGGQDVERQLRKLEGGSHLVIGTPGRL
LDHMRRESLSLGGVNMLVLDEADQMLHMGFLQEVEAIIRSIPRRRQSMLFSATMPDGVRR
LAKNMMNSPRDIRISSDSDIPLDNIRQLAIECTDRSKQDALVSMIERDRPYLAVIFCRTK
RRAKTLNEALQEKGYASDELHGDLSQAKREQVMRSFRSAKLQLLVATDVAARGIDVEGVT
HVYNYDIPQEVEYYVHRIGRTGRAGGKGLAVTFVAPKDLPELRDIERFLGLRIPRQRYEA
STGLVEKAGTASQAGQAGETGRGARAESRQGKGGSGGRSAKPGGRRGAGRQGAGAGRGSG
TGANGSRSGGKRGGEGRPSAGGRGGRQDSRGGSKGGRGSSSGGRGGGRRG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaatattaaaaaagcagggaatcggggttccgactccggttcaggagcaggcg
cttccggtgctgctggccggggaggatgtcattgcccaggcacagacgggtacaggaaaa
acgctggcttttctgcttccgatcatagagaaaatcgatctgcgtaaaaatcatccgcag
gcactggttattctgccgacgcgcgagctggcgatccaggtgacggccgaagcgcgcaag
cttgcagcggccaagccgggcctgcagctgctggccgcatacggcgggcaggatgtggag
cggcagctccgcaagctggagggcggcagccatctggtcatcggcacgccgggacggctg
ctggatcatatgcgccgggagtctttgtcgctaggcggcgtgaacatgctggtgctggac
gaggccgatcagatgctgcatatgggatttctgcaggaagtggaggccattatccgctcc
atcccgcgcagacgtcaaagcatgttgttctcggcaacgatgccggacggcgtacgccgc
ctggccaaaaatatgatgaacagcccgcgcgacatccggatctcttcggattcggacatc
ccgctggacaacatccgccagctcgcgatcgagtgtacggaccgctcgaagcaggatgcg
ctggtgtcgatgattgaacgggaccgcccttatctggcggtgatcttctgccggacgaaa
cgccgggcgaagacgctgaatgaagcgctgcaggagaaagggtatgcttcggacgagctg
cacggcgatttgtcccaggccaaacgcgagcaggtgatgcggtcgttccgcagcgccaag
ctgcagctgctggtcgccaccgacgtggcggcccgcggaatcgacgtggaaggtgtaacc
cacgtctacaactatgatattccgcaggaagtggaatattatgtgcaccggatcggccgg
acgggccgcgcaggcggcaaagggttggccgtcacgtttgtggcgccgaaggatctgccg
gagctgcgcgatatcgagcgcttcctcgggctccgtattccgcgccagcgctacgaggcc
tcaaccggcctcgtagagaaagccggcacggccagccaggctggccaagccggtgaaacc
gggcgcggagcacgcgccgagagccgccagggcaaaggcggctctggaggtcgctccgcg
aagccgggcggccgccgcggggcgggccgccaaggtgcgggcgccggccgcggcagcggc
accggcgcaaacggcagccgcagcggcggcaagcgcggcggcgagggcagaccgtccgcc
ggcgggcgcggcgggcggcaggattcccgcggcggctccaagggaggccgcgggtcgtct
tccggcggccgcggaggtggccgccggggttag
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