Pyrococcus sp. NA2: PNA2_1128
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Entry
PNA2_1128 CDS
T01487
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
pyn
Pyrococcus sp. NA2
Pathway
pyn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pyn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PNA2_1128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyn03019
]
PNA2_1128
Messenger RNA biogenesis [BR:
pyn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PNA2_1128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSBP1
Baculo_PEP_C
DUF4407
BLOC1_2
TPR_MLP1_2
FUT8_N_cat
FlgK_D1
MAAL_C
Exonuc_VII_L
DUF1664
DUF948
DUF2254
Sec3_CC
Spike_torovirin
DUF1515
DUF3810
DUF4988
STX6_10_61_N
Motif
Other DBs
NCBI-ProteinID:
AEC52044
UniProt:
F4HN40
LinkDB
All DBs
Position
complement(1037914..1038978)
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AA seq
354 aa
AA seq
DB search
MTPIITLIILIASVVTLVYYVRDITSKVTARYFELKDLVNDNEAKLENARSLLQESIKDF
RREIREAEKRIKNLEDSIVKKVDELGKRISSIEKELKDLKKKILLIERLNDKIKELSVRI
DSIEPENLRKELKEDIKSEILNELRDEIESFEDMLEKKKEEELKEFLDLLTMSINLPPEK
VKDGLIQAKLALLSLRDIAKVYVLTGKGIEEFEKLRENLVSFLKEMRKLVVIALPEEDIY
SEMTSIIAELKKLKLPLEEKGKELSPEKSFIRVHNMIYDLTSKLDRVAEKIEGPIPVTPI
EKEFYEKLKIQFENLKKLEKQVQELLARLGGEIKKEEKRDKIDEIKKILEDLGV
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgacacccatcataacgctgattattctcatagcttcagtggttacattggtgtactac
gttcgagatataaccagcaaggtaacggcgagatattttgagttaaaggatctcgtcaat
gataacgaagcgaaacttgaaaacgcaaggtcactgctccaggagagtataaaagatttt
agaagggaaataagggaagcagagaagagaataaagaacctggaagatagcattgtaaaa
aaagtagacgaacttggtaagagaatttcttccatagagaaggagctcaaagatctgaaa
aagaaaattcttctaattgaaaggctcaatgataaaatcaaagagctttcagtgagaatt
gattcaatagaacctgaaaatttaagaaaagagctaaaggaagacataaaatctgagata
ttgaatgaactaagagacgagatagagagctttgaggacatgctagagaaaaagaaggag
gaggaacttaaggaattccttgacttactcacgatgtcaataaacctgcctccagagaag
gtgaaagatggactcatacaggcaaagcttgcccttctctccttgagagatatagccaag
gtctacgtgttaaccggaaagggcattgaagagtttgagaagttaagagagaacttggtg
tcctttttaaaggagatgagaaagcttgtcgttatagccttgccggaggaagatatttac
tccgagatgacatcgataattgccgaactcaaaaaattaaaactccctctagaggaaaaa
ggtaaagagctatctccagaaaagagttttatacgagtacataacatgatatacgatcta
acaagtaaactggacagagtagctgagaaaattgaaggtcccattcccgtaacgcctata
gagaaagagttttatgagaagcttaaaatccagttcgaaaacctgaaaaagttagagaag
caggttcaagagctcttagctagacttggcggtgagataaaaaaggaagaaaaaagggac
aaaattgatgagataaagaagatacttgaagatcttggtgtttag
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