Pyrobaculum ferrireducens: P186_1290
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Entry
P186_1290 CDS
T01670
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pyr
Pyrobaculum ferrireducens
Brite
KEGG Orthology (KO) [BR:
pyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pyr03016
]
P186_1290
Enzymes [BR:
pyr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
P186_1290
Transfer RNA biogenesis [BR:
pyr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
P186_1290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Corona_NS2A
Motif
Other DBs
NCBI-ProteinID:
AET32719
UniProt:
G7VDD4
LinkDB
All DBs
Position
1083877..1084440
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AA seq
187 aa
AA seq
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MSLVRSFVAVDIEAQDVVRRVEEVQREVLRLGLDVKLVERENLHLTLRFLGEIPQSNVDA
AIRALAQLRFSKFQIKLADVGVFPDLSRPRVLWIGVSQGVEKLTELADVVRRAVDRYAEH
REDREFTPHLTIGRVKSGRNIDKLRELLGRYRGVEFGVVTVDKVKLKKSTLTPRGPIYSD
LFVLTLT
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgtcagatccttcgtggctgtggacatcgaggcgcaggacgtagttaggaga
gttgaagaggtgcagagagaggttttgaggctcgggctagacgtaaagctcgtagagcgg
gaaaatttacatctgactctccgcttcctcggcgagattccacagagcaatgtagacgcc
gcgatccgcgccttggcgcagttgaggtttagcaaattccagattaagttggccgacgtg
ggcgtctttccagatctttcaagaccgcgggtgttgtggatcggcgtctcacagggtgtt
gagaagcttacagagctcgcggatgtggtgcgaagggctgttgatagatatgccgaacac
cgcgaggatagggagttcaccccccatttgacaatagggcgtgtgaagagcgggcgcaat
atcgacaagctgagggagttgctggggcgctaccggggagttgagtttggagtagtcact
gtagacaaggtcaagctgaagaagtccacgcttacgccgagaggtcctatttatagtgac
ttatttgtgttaacacttacgtga
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