KEGG   Polynucleobacter yangtzensis: PKF023_02130
Entry
PKF023_02130      CDS       T08788                                 
Symbol
nrdA
Name
(GenBank) ribonucleoside-diphosphate reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
pyt  Polynucleobacter yangtzensis
Pathway
pyt00230  Purine metabolism
pyt00240  Pyrimidine metabolism
pyt01100  Metabolic pathways
pyt01232  Nucleotide metabolism
Module
pyt_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
pyt_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:pyt00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    PKF023_02130 (nrdA)
   00240 Pyrimidine metabolism
    PKF023_02130 (nrdA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pyt03400]
    PKF023_02130 (nrdA)
Enzymes [BR:pyt01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     PKF023_02130 (nrdA)
DNA repair and recombination proteins [BR:pyt03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    PKF023_02130 (nrdA)
SSDB
Motif
Pfam: Ribonuc_red_lgC ATP-cone Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: BDT76410
UniProt: A0A9C7D0Y3
LinkDB
Position
206222..209188
AA seq 988 aa
MTYANPQTADQSAGANNPGMSPAGAMNQAPSAGFVAGGVGGTQATQLSDYKIIRRNGSVV
AFEPSKIAIAVTKAFLAVNGGQGAASARVREQVEQLTHSVVRALLRSRPNGGTFHIEDIQ
DQVELALMRSGEHNVARAYVLYREKRNQERAAQQEVSQEAQTANQAGESGIKVTDNGVEK
WLDMAALRTVIEAACEGLGTHIDATPIITETIKNLYDGVPMAQVYDSAILASRTLIEKDP
AYSQVTARILMHVIRKEILGKEVLQGDMQAEYSTYFAKYINEGISAELLDPRMREFDLPR
LAAALNASRDLQFNYLGLQTLYDRYFLHIEDRRIEMPQAFFMRVAMGLALNELDRERRAI
EFYEILSTFDFMSSTPTLFNSATTRPQLSSCYLTTVDDDLDGIYEALKENALLSKFAGGL
GNDWTNVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHLDIE
EFLELRKNTGDDRRRTHDMNTSNWIPDLFMKRVMEGGDWTLFSPSNTPDLHDKFGKAFEE
AYVAYEQKADRGELKPFRRIPAQQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHIGVVH
SSNLCTEITLNTNETEIAVCNLGSVNLTAHMTTDANGKMILDHEKLQRTVRTAMRMLDNV
IDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHMQRIPYASDEAVKFADSSMEAVCYYAY
QASNELAEERGVYSTYKGSLWDRGILPQDSVAMLAAERGGYVEVDNSSTMDWSGLRARIK
QHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLFVKSNLSGEFTVVNEYLVRDLKDRG
LWDEVMIADLKYFDGTLSKIDRIPQDLRDLYATAFEVEPTWLVEAASRRQKWIDQAQSLN
IYMAGASGKKLDDTYKLAWLRGLKTTYYLRTMAATHVEKSTVASGQLNAVSSGGGVNGTD
AAAAQEADGPVCTMRPGDAGFEECEACQ
NT seq 2967 nt   +upstreamnt  +downstreamnt
atgacatacgctaatccacagacagcagaccaatccgctggagcgaataacccaggaatg
agtcctgcaggggcaatgaatcaagctccttccgccggctttgtggctggtggtgttggt
ggcactcaggcaacacaattgtctgattacaaaatcattcgccgcaacggttccgttgtt
gcttttgaaccatccaaaattgccattgctgtaaccaaagcatttttagcggttaatggc
ggtcaaggtgctgcatctgcacgcgtacgtgagcaagttgagcaattgacacattctgtt
gtgcgcgcattgttgcgtagccgtccaaacggtggcactttccacattgaagatattcaa
gaccaggttgagttggctttgatgcgcagcggcgagcacaacgttgctcgtgcctacgtt
ctctatcgtgagaagcgcaaccaagaacgcgctgctcagcaagaagtttcacaagaagca
caaaccgctaatcaggctggtgagtctggtatcaaggtgacggataacggtgttgagaag
tggcttgatatggctgctttgcgcacagtgattgaggctgcttgcgaaggcttgggaaca
catattgatgcaaccccaatcatcactgaaaccattaagaatttgtatgacggcgtacca
atggcgcaggtgtatgactccgcgatcttggcatcccgcacattgattgaaaaagatcct
gcatacagccaagtaactgcgcgtattttgatgcatgtgattcgtaaagaaatcttgggc
aaagaagtattgcaaggcgacatgcaagctgagtacagcacctattttgcaaagtacatc
aacgaaggaatttccgctgaattattagacccacgcatgcgcgagttcgatttgccacgc
ctagccgcagctttgaatgctagccgcgatttgcaatttaactatctcggtttgcagact
ttgtatgaccgctatttcttgcacattgaagaccgtcgcattgagatgccacaggccttc
ttcatgcgcgttgcaatgggcttggctctgaatgagttggatcgcgagcgtcgtgcaatt
gagttctatgaaatcctttctacatttgatttcatgtccagcacaccaacattattcaat
tcagctacaacacgtccacagctctctagctgctacttgaccactgtagatgatgaccta
gatggcatttatgaggcattgaaagaaaatgctttgttgtctaagtttgctggcggcttg
ggtaacgactggactaacgttcgtgcgttgggaagccatatcaaaggtactaacggtaaa
tcacaaggtgttgtgccattcttgaaggtggtgaatgacactgccgtagctgttaaccaa
ggcggtaagcgcaagggtgcggtttgcgcctacttggaaacatggcacttagatatcgaa
gagtttttggagttgcgcaagaacacaggtgacgaccgtcgtcgtacccatgacatgaat
acctccaactggattcctgacttgttcatgaagcgcgttatggaaggtggcgattggact
ttgttctctccatctaatacccctgatttgcatgacaagtttggcaaagcttttgaagaa
gcttatgttgcttatgagcaaaaagctgatcgtggtgaattgaagccattccgccgcatt
ccagcgcagcaattgtggcgcaagatgctcggcatgttgtttgaaactggccacccatgg
atcacatttaaagatccttgcaacatccgtagcccacagcagcacattggcgtagttcac
tcatcaaacctctgtactgagatcactctcaatacaaacgagactgagattgcggtttgt
aacttgggttctgtgaacttaactgctcacatgacaactgatgctaacggcaagatgatt
ttggatcacgagaagctccaaagaaccgttcgcactgcaatgcgtatgttggacaacgtg
attgatatcaactactacgcagtagctaaagctcgtaactccaatttgaagcatcgtccg
gtcggtatgggcatcatgggcttccaggattgcttgcatatgcaacgtattccttacgct
agtgatgaagccgtgaagtttgctgattcttccatggaagcggtttgctactacgcttat
caagcatccaatgaattggctgaagagcgcggcgtttacagcacatacaaaggttcattg
tgggatcgcggcatcctcccgcaggattcagtagcaatgttggcagctgagcgtggcggt
tatgtggaggtagacaactcttccactatggattggagcggtttacgtgcacgtatcaag
caacacggtatgcgcaactcaaactgtgtagcgattgcgccaacagcaacgatttccaac
attattggtgtttctgcttgtatcgagcctacattccagaacttgttcgtgaaatccaac
ctttctggcgaattcacagtggtgaacgagtacttggtgcgtgatttgaaagatcgcggc
ctctgggatgaagtcatgattgccgatttgaagtactttgacggcactttgtctaagatc
gatcgcattccacaagatttgcgtgatttgtacgcaacagcctttgaggttgagccgacc
tggttggttgaggcagcttctcgtcgtcaaaagtggattgaccaagcgcagtcattgaat
atctacatggccggcgcttctggcaagaaattggatgacacctacaagttggcttggttg
cgcggcttgaagacgacttactacctccgcacaatggctgctactcacgttgagaaatca
actgttgctagcggtcagttgaatgcagtttcaagcggtggtggcgtgaacggtacagat
gctgcagcagcacaagaggcagatggtccggtttgcacaatgcgcccaggcgatgcagga
tttgaagaatgtgaagcatgccaataa

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