Puma yagouaroundi (jaguarundi): 121013837
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Entry
121013837 CDS
T07555
Symbol
COL5A3
Name
(RefSeq) collagen alpha-3(V) chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
pyu
Puma yagouaroundi (jaguarundi)
Pathway
pyu04820
Cytoskeleton in muscle cells
pyu04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121013837 (COL5A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
121013837 (COL5A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pyu00536
]
121013837 (COL5A3)
Glycosaminoglycan binding proteins [BR:
pyu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121013837 (COL5A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COLFI
Collagen
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
121013837
NCBI-ProteinID:
XP_040305575
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MGSRRGLSQPRAGLCLLLASLQLLLRTQAADPVDVLKALGVRGGQAGVSEGPGFCPQRAP
EGDRAFRVGKATTLGIPTWELFPDGHFPENFSVLITLRGQPANQSVLLSIYDEGGARQLG
LALGPALGLLGDSFSPLPQQVNLMDGRWHRVAISVDGRMVTLVADCEPQPPTLGQGPRFI
STAGLTVLGTQDLGEETFEGDIQELLISPDPQAAFQACERYLPGCDNLDPIATGAPQGEP
ETPAPRRKGKGKGKKKGRGRKGKGRKKKKNEETLTPSLPPGSLENQTSPDIPQTETPAST
LPPIPTPLVMTTTVTIGHNVTMLEGPLDPDSGTELRTLETKLAKEDKEGGGPTIVPVFRA
AEQPSQTQFQIFSGAGEKGAKGEPAVIEQGQKFEGPPGAPGPRGVVGPSGPPGPPGFPGD
PGLPGPAGLPGIPGIDGIRGLPGTVIMMPFQFASSSLKGPPVSFQQAQAQAVLQQAQLSM
KGPPGPVGLTGRPGPVGLPGYPGQKGEMGEMGPQGPRGLQGPLGPPGREGKMGRSGADGA
RGLPGDTGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGEDGEKGAEGPPGPTGQAGE
PGPRGLIGPRGSPGPLGRPGVLGIDGAPGAKGNVGPPGEPGPPGQQGNPGSQGLPGPQGP
IGTPGEKGPPGNPGIPGIQGSDGPPGHPGHEGPTGEKGAQGPPGSAGPPGYPGPRGVKGT
SGNRGLQGEKGEKGEDGFPGFKGDGGLKGDRGPPGPPGPRGEDGPEGLKGQEGLAGEEGP
PGSAGEKGKLGLPGLPGYPGRPGPKGVAGPPGQKGSKGSPGSFGPRGDTGPPGPPGPPVG
SPGSMLGVSVPLGPQGPEGGLEEVLASLTSLSFELEQMRRPPGTAERPGLVCSELHRNHP
HLPDGEYWIDPNQGCARDALRVFCNFTAGGETCLYPDKKFETVKMASWSKEKPGNWYSTF
RRGKKFSYVDADGSPVNVVQMTFLKLLSATAHQSFTYSCQNSAAWLDEAAGDYGRSLRFL
GANGEEVSFNQTTAATIAVPYDGCRLRKGQTKTLLEFSSSQVGFLPLWDVAATDFGQTNQ
KFGFELGPVCFSS
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggggagtcgccgaggcctgagccagccgcgggccggcctctgcctgctcctggcctcg
ctgcagcttctgctccggacgcaggccgcagaccctgtggatgtgctgaaggccctgggt
gtgcgagggggccaggctggagtctctgaagggcctggcttctgcccccagagggccccg
gagggtgaccgggcattcagggttggcaaggccaccacacttgggatccctacgtgggag
ctttttccagacgggcactttcccgagaacttttccgtgctgatcactctgcggggccag
ccagccaaccaatctgtccttctgtccatttatgatgagggtggtgctcggcagctgggc
ctggctctggggccagctctgggtcttctaggtgactccttcagccccctcccccagcag
gtcaacctcatggatggcaggtggcaccgtgtggcaatcagtgtggatggcaggatggtg
actctggtggccgactgtgaacctcagccccccacgttgggccaggggcctcgattcatt
agcacggctggactcactgtgttgggaacccaggatctcggggaggagacttttgaggga
gatattcaggagttgctgataagtccagatcctcaggctgccttccaggcctgtgagcgg
taccttcctggctgtgacaacctggaccctatagccacaggggccccccagggtgagcca
gaaactccagcccctcgacgtaaggggaagggaaaagggaagaaaaaagggcgaggtcgt
aaggggaagggcaggaagaagaagaagaacgaggagactttgaccccaagcctacctcct
ggctccctggagaaccagacctcccctgacatcccccaaacagagacaccagcttcaact
ttacctccgattcccacgcctttggtcatgaccaccactgtgactattggccacaatgtc
accatgctagaggggcccctggaccctgacagtggaacagaactgaggaccctggagact
aagttagccaaagaagacaaagaaggaggtggccctaccattgtccctgtcttccgggca
gcagagcagccgtcacagactcagttccagattttttctggtgctggagagaagggagca
aaaggggaaccagcagtgattgaacagggacagaagtttgagggacctccaggagcccca
ggaccccgaggggtggtcggcccctcaggccctcccggccccccaggattccctggagac
cctggtctaccgggtcctgctggcctccccggaatccctggcatcgatgggatccggggt
ctaccaggcactgtgatcatgatgccgttccagtttgcaagcagctccctcaaaggaccc
ccagtctccttccagcaagcccaggcgcaggcagtcctgcaacaggctcagctgtctatg
aaaggtcctcctggcccggtggggctcactgggcgcccaggccctgtgggtctccctggg
tatcccggtcagaaaggagagatgggagaaatggggccacagggtccccgaggccttcag
ggacctcttgggccccctggccgggagggaaagatgggccgctctggagcagatggggcc
cggggcctcccaggggacacaggacctaagggtgatcggggctttgacggcctgccaggg
ctgcctggtgagaagggccaaaggggtgactttggccatgtggggcaacctggcccccca
ggagaggatggtgagaagggagcagagggacctccggggcccacaggccaggctggggaa
ccgggcccccgaggactgatcggccctagaggctcccctggtcccctgggacgcccgggt
gtacttgggattgatggtgctccgggagccaagggaaatgtgggtcctcccggagaacca
ggccctccaggacagcagggaaatcctggatcccagggactccctggcccccagggaccc
attggcactcctggggagaagggcccccctggaaacccaggtattccaggcattcaagga
tctgatggccctccgggtcacccaggccatgagggtcccacaggagagaaaggggcccag
ggtccaccagggtcagcaggacccccgggctatcctggacctcggggtgtgaagggtacc
tctggcaaccgtggcctccagggggagaaaggagagaagggagaggatggcttcccaggc
ttcaagggcgatggggggcttaaaggagatcggggaccccccgggccccccggtcctcgg
ggagaagatggtcccgaagggctgaaggggcaggaggggctggccggcgaggaggggccc
ccaggctcagctggggagaagggcaagctggggttgccaggtctcccaggttacccagga
cgtccaggccctaagggtgtggcgggtcctccaggacagaagggctcaaaaggttccccg
ggatcctttggtccccgtggcgacactggcccccctgggccccctggccctccggtaggt
tccccagggagtatgttgggagtgtctgtcccactgggaccccaaggcccggagggcggc
ctggaggaggtgctggcctcgctcacgtcgctgagcttcgaactggagcagatgcggcgc
cctcccggcacagctgagcgcccgggcctcgtatgcagtgagctgcaccgcaaccacccg
cacctgccggatggggaatactggattgaccccaaccagggctgtgcgcgggacgcgctc
agggttttctgcaacttcacggctggaggagagacctgcctctatcccgacaagaagttt
gagaccgtgaaaatggcctcctggtccaaggaaaagccgggaaactggtacagcacattc
cgtcgagggaagaagttctcctacgtggacgctgacgggtctccggtgaacgtggtgcag
atgactttcctgaagctgctgagtgccacagcccaccagagcttcacctactcctgccag
aactctgccgcctggctggacgaagctgcaggcgactacggccgctccctccgcttcctc
ggggccaacggggaagaggtgtccttcaaccagacgacggcagccaccatcgctgtcccc
tacgatggctgccggctccgcaagggacagacgaagaccctcttggagttcagttcttcc
caagtggggtttctgcctctgtgggacgtggcggctactgacttcggccagacgaaccag
aagtttgggtttgaactgggccctgtctgctttagcagctga
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