Herpailurus yagouaroundi (jaguarundi): 121014480
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Entry
121014480 CDS
T07555
Name
(RefSeq) collagen alpha-3(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
pyu
Herpailurus yagouaroundi (jaguarundi)
Pathway
pyu04151
PI3K-Akt signaling pathway
pyu04382
Cornified envelope formation
pyu04510
Focal adhesion
pyu04512
ECM-receptor interaction
pyu04518
Integrin signaling
pyu04820
Cytoskeleton in muscle cells
pyu04926
Relaxin signaling pathway
pyu04933
AGE-RAGE signaling pathway in diabetic complications
pyu04974
Protein digestion and absorption
pyu05146
Amoebiasis
pyu05165
Human papillomavirus infection
pyu05200
Pathways in cancer
pyu05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
121014480
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121014480
04518 Integrin signaling
121014480
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121014480
09142 Cell motility
04820 Cytoskeleton in muscle cells
121014480
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
121014480
09154 Digestive system
04974 Protein digestion and absorption
121014480
09158 Development and regeneration
04382 Cornified envelope formation
121014480
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
121014480
09162 Cancer: specific types
05222 Small cell lung cancer
121014480
09172 Infectious disease: viral
05165 Human papillomavirus infection
121014480
09174 Infectious disease: parasitic
05146 Amoebiasis
121014480
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
121014480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pyu04147
]
121014480
00536 Glycosaminoglycan binding proteins [BR:
pyu00536
]
121014480
Exosome [BR:
pyu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
121014480
Glycosaminoglycan binding proteins [BR:
pyu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121014480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
121014480
NCBI-ProteinID:
XP_040306756
LinkDB
All DBs
Position
Unknown
AA seq
1671 aa
AA seq
DB search
MRSGTARRPPALLLQLLLVLLAAAPTTGKGCVCKDKGQCFCDGIKGEKGEKGFPGPAGSP
GQKGFPGPEGLPGPQGPKGSPGLPGLTGPKGGRGITGLPGFSGPPGLPGTPGHPGPYGPA
GVPGCNGSKGEQGFPGLPGIPGYPGIPGAVGLKGEKGAPAAEGIELDGRGDPGLPGAPGL
QGLPGLPGFPGPIGPPGPPGLFGFPGTMGPPGLKGHMGDNVIGQKGERGVKGLTGPPGPP
GTVIVTLTGPDNRTQDLKGEKGDKGAMGKSGPPGPSGPPGESYGAEKGAPGEPGPQGKPG
KDGTPGFPGTEGAKGNRGFPGLPGEDGIKGWKGDIGPPGFRGPTEYYDAYQEKGDVGIPG
PPGPKGARGPQGPSGPPGVPGSAGSSRPGLRGAPGFPGVKGRKGERGPPGKNAVGPPGSP
GCPGAPGPIGSPGYPGPPGDIIFRKGPPGDSGLPGPIGFPGIPGVDGPKGEPGLLCIQCP
CVPGPPGLPGLPGLDGMKGIPGGQGPTGSKGSPGSPGSAGLPGYPGFPGAQGDPGLKGEK
GEAPQPDGQVGAPGDPGLRGHPGRRGLDGIPGTPGVKGSPGPKGEPALTGEKGDQGPPGD
PGTPGPPGPAGPPGPPDYGPQGEPGPKGTQGIPGAPGPPGEAGPKGEFSVSTPVPGPPGP
PGLPGRAGPQGPPGIPGSIGKCRYPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGAKGSP
GCPGEMGKPGSPGEPGLPGAKGEPGLALPGEPGTPGFPGERGNPGKNGEIGLPGHPGLPG
IPGTRGLDGPQGDPGKAGPPGEKGPPGRCMEGPRGAQGLPGLNGLEGQQGRRGETGPKGD
PGIPGLDRSGFPGEPGPPGMPGHRGEVGPPGQKGYPGNPGFLGPPGEKGTIGMMGYPGHI
GPPGPPGNPGTPGQRGDFGIPGAKGEKGHPGAQGEEGDKGPQGPSGISHLLGDKGEPGLK
GFAGKPGEKGNSGVPGLPGLKGLQGPPGPPGPPGPRGDPGNIGNPGAPGPRGVPGSMGIM
GVPGPKGHRGALGLPGLTGRPGLPGVHGLQGEKGEPGYSAGARPGSPGPKGDPGFPGDMG
RKGERGVPGAPGHSGPAGPEGAPGNPGNPGHPGKPGPDGDLGLKGIKGFPGPPGVKGPPG
PPGFPGPPGPMGMRGNQGRDGIPGPAGEKGETGLLEAVPGPRGSPGVPGAKGDRGAPGLP
GLPGRKGIVGDAGPWGPTGMTGLPGPPGFPGAVIPGQKGNRGPPGFRGNPGNPGPPGPPG
SHVRGLKGDKGLLGKPGPRGPPGTVGDEGPLGQPGAPGAPGLPGLRGDPGFHGFPGVKGE
KGNPGFLGPVGPPGQIGPKGPPGIRGDPGTVKIISLPGSPGPPGPVGEPGMQGEPGPPGP
PGILGPCGPRGKPGKDGRPGTPGPIGEKGNKGCKGEQGPPGLDGLPGLKGKPGDIGPPTT
ATAMRGFIFTRHSQTTAIPSCPEGTQPLYSGFSLLFVQGNEQAHGQDLGTLGSCLQRFTT
MPFLFCNINDVCNFASRNDYSYWLSTPALMPMDMAPITGRALEPYISRCTVCEGPAMAIA
IHSQTTDIPSCPHGWISLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGR
GTCNYYSNSYSFWLASLNPKRMFRKPIPSTMKAGELEKIISRCRVCMKRRQ
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atgcgctccgggacggcgcggaggccgcccgcgctgctgctgcagctcctgctggtgctc
ctggcggcggcgcccacgacaggcaagggctgtgtctgtaaagacaaaggccagtgcttc
tgtgatgggatcaaaggagagaagggggagaaaggctttcctggacccgctggttctcct
ggccagaaggggttcccaggtcccgaaggcttgcctggaccgcagggacccaagggctca
ccaggacttccaggactcaccggtcccaaaggtggaaggggaataactggattgccagga
ttctcaggtcctcctggacttccaggcaccccgggccatcctggaccatatggacctgct
ggtgtaccagggtgcaatggttctaagggtgagcaagggtttccaggccttccggggata
ccaggctacccggggatcccgggtgctgttggcttgaaaggagaaaagggagctcctgct
gcagaaggtatagaacttgatggaagaggtgaccccgggttgccaggagccccaggatta
cagggcttaccaggccttccaggttttcctggacccattggtccacctggccctccaggg
ctctttggctttccaggaaccatgggacctccaggacttaagggtcacatgggcgataat
gtgataggacaaaaaggagagcggggtgtgaaaggattgacaggaccccctggaccacca
ggaacggttattgtgacgctaaccggcccagataacagaacgcaggacctcaagggagag
aaaggggacaagggagccatgggcaaatccggacctcctggaccctcaggaccgcctggg
gaatcttatggagctgaaaaaggtgctcctggagaacctggcccgcagggaaaacctgga
aaagatggaacccctggtttccctggcactgagggagccaaaggcaacaggggcttccct
gggttaccaggggaagacggcattaaggggtggaaaggggacattggccctccaggattc
cgtggtccaacagaatattacgatgcataccaggaaaagggggatgtaggaattccaggc
ccaccaggccccaaaggagctcgtggcccacagggtcccagtggtcctcctggagttcct
ggaagtgctgggtcgtcgaggcctggcctcagaggagcccctggattcccaggggtgaaa
ggaaggaaaggggaacgaggacccccgggaaagaatgcagtggggcctcctgggtccccg
ggttgtcctggggcaccaggccccatagggtcgccgggatacccaggaccaccaggtgac
atcatttttcgcaaaggtccacctggagatagtggacttccaggccctatagggtttcca
ggaatcccaggagtcgatgggcccaaaggggaaccaggcctcctgtgcatccagtgtcct
tgtgtcccagggcctccgggcctcccaggattgccggggttagacggcatgaaaggaatc
ccaggcggacaagggccaactggcagtaaaggaagcccagggtccccaggaagtgcgggt
cttcccggatatccagggttcccgggtgctcagggggatccaggacttaaaggagaaaaa
ggggaagcacctcaacctgatggacaagtgggtgccccaggggaccctgggctcagaggg
catcctggaagaagaggcttggatgggattcctggaacccccggggtaaaaggatcacca
ggacctaaaggggaaccggccctgactggtgagaagggggaccagggtcctccaggggat
cccggcacccctgggcccccaggacctgcaggaccacctggaccaccagactatggaccg
cagggagagcctggtccaaagggtacccaaggaattcctggagcccccggaccacctgga
gaagccggtcctaagggagaattcagtgtttcgacaccagtcccagggcccccaggacct
ccagggctccctggccgtgctggcccccaaggtccgcctggtatccctggatccatagga
aaatgtcgttatccgggtcttcctgggcctgatggtgaaccagggattccaggaattggc
ttccctgggcccccaggacctaaaggagaccaaggttttccaggagcaaaaggatcacca
ggttgtccaggagaaatgggaaagcctgggtcacctggagaaccaggtctccccggagcc
aagggagagccaggactagccttgcctggagaaccaggaacgccaggttttccgggagaa
agaggcaatcctgggaaaaatggagaaattggactccctggacatccaggtctccctgga
attccaggaaccagagggcttgatggaccacaaggggatccagggaaggctggaccacct
ggagaaaaaggacccccaggaaggtgcatggagggtcccaggggagcccaaggacttcca
ggattaaatggattggaaggtcaacaaggcagaagaggtgaaacggggccaaagggagac
ccaggtattccaggcttggataggtcaggctttcctggagaacccggaccaccagggatg
ccaggtcatcgaggtgaggtgggaccacctggtcaaaaaggatatccaggaaatccagga
tttttaggaccaccaggtgaaaaaggaacgattggcatgatgggctatccgggacacatt
ggtcctccggggcctcccggaaacccaggaaccccaggacagaggggtgactttggaatc
ccaggagcaaagggtgagaaagggcacccaggagcccagggtgaagaaggagacaaagga
ccccaggggccttctggaatatcacacctactgggggacaaaggagaaccaggcctcaaa
ggatttgcagggaagccgggtgagaaaggaaacagtggtgttccagggttaccgggttta
aaaggactccaagggccacctggaccaccaggaccaccaggccccagaggagatccaggc
aacattgggaatcccggggcaccaggaccacgtggcgtgccaggaagcatggggatcatg
ggggtgccaggtcctaaaggacacaggggagctttgggactaccaggtttaactggaagg
ccaggcctcccaggtgttcacggtctccaaggagagaagggagagccgggttattcagca
ggtgcaaggccaggatcaccgggaccaaagggagatccaggatttccaggtgacatggga
aggaaaggagaaagaggggtacctggagcacctggacattcggggcctgctggacctgag
ggagcccctggaaaccccggaaatcctggtcacccaggaaagccgggccctgatggtgat
ttggggttaaaaggcattaagggcttccccggtcctccaggagtaaaaggccctccagga
cctccaggatttccaggacctcccggaccaatggggatgagaggcaaccagggacgtgat
ggaatccctggcccagcaggagaaaagggagaaacaggtttgctggaagcagttccaggc
cccagagggagccctggagttccaggagccaaaggagacaggggagccccaggcttaccc
ggcctccccggcaggaaagggatagtgggagatgccgggccgtggggacccaccggcatg
acgggactcccaggaccaccgggttttcctggcgcagtcatccctggccagaaaggaaat
cgaggtccaccaggcttcagaggaaacccaggtaaccctggtcctccgggacctccaggg
agtcacgtgagaggcttgaaaggggacaaggggcttctgggcaagcctggccctagaggt
ccacctggaactgtaggagatgaggggccactgggtcagccgggagcaccaggtgcccca
ggtctgccagggctcagaggtgatccgggattccatggatttccaggtgtaaaaggggag
aagggtaatccaggatttctgggaccagttggacctccagggcaaattgggccaaaagga
ccacccggtatacgtggagaccctggcacagttaagatcatctccctcccgggaagcccg
gggccacctggacctgttggagaaccagggatgcaaggagagcctgggccaccggggcca
ccaggaatcctaggaccctgtgggccaagaggtaaaccaggcaaggatggaaggccggga
actcctgggccaattggagaaaaaggcaacaaaggctgtaaaggagagcaaggaccccct
ggtttggatggactgccaggcttgaagggcaaacctggagacattggaccacccacaact
gcaacagccatgagaggcttcatcttcaccaggcacagtcagaccacagccatcccttcc
tgcccagaaggcacacagccgctctatagtgggttctctcttctttttgtacaaggaaat
gaacaagcccacggacaagacctgggaacccttggcagctgcctgcagcgatttaccaca
atgccattcttgttctgtaacatcaatgacgtatgcaattttgcatctcgaaatgattat
tcatactggctgtcaacaccagctctgatgccaatggacatggctccaattactggcagg
gccctggagccttatattagcagatgcaccgtctgtgaaggtcctgcgatggccatagct
atccacagccaaaccactgacattccctcctgtcctcacggctggatttctctctggaaa
ggattctcttttatcatgttcacaagtgcaggttctgagggcgcaggtcaggctctggca
tcccccgggtcctgtctggaagaattccgagccagtccatttatagaatgtcatggaaga
ggaacgtgcaactactattcaaattcctacagtttctggttggcttcattaaaccccaaa
aggatgttcagaaaacctattccatcaactatgaaagctggggagttagaaaagataata
agtcgctgtcgggtgtgcatgaagagaagacaatga
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integrated database retrieval system
