Puma yagouaroundi (jaguarundi): 121028725
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Entry
121028725 CDS
T07555
Symbol
COL1A2
Name
(RefSeq) collagen alpha-2(I) chain isoform X1
KO
K06236
collagen type I alpha
Organism
pyu
Puma yagouaroundi (jaguarundi)
Pathway
pyu04151
PI3K-Akt signaling pathway
pyu04510
Focal adhesion
pyu04512
ECM-receptor interaction
pyu04611
Platelet activation
pyu04820
Cytoskeleton in muscle cells
pyu04926
Relaxin signaling pathway
pyu04933
AGE-RAGE signaling pathway in diabetic complications
pyu04974
Protein digestion and absorption
pyu05146
Amoebiasis
pyu05165
Human papillomavirus infection
pyu05205
Proteoglycans in cancer
pyu05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
121028725 (COL1A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121028725 (COL1A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121028725 (COL1A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121028725 (COL1A2)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
121028725 (COL1A2)
09152 Endocrine system
04926 Relaxin signaling pathway
121028725 (COL1A2)
09154 Digestive system
04974 Protein digestion and absorption
121028725 (COL1A2)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
121028725 (COL1A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
121028725 (COL1A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
121028725 (COL1A2)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
121028725 (COL1A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
121028725 (COL1A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pyu00536
]
121028725 (COL1A2)
Glycosaminoglycan binding proteins [BR:
pyu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121028725 (COL1A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
121028725
NCBI-ProteinID:
XP_040328585
LinkDB
All DBs
Position
Unknown
AA seq
1367 aa
AA seq
DB search
MLSFVDTRTLLLLAVTSCLATCQSLEEATARKGPTGDRGPRGERGPPGPPGRDGDDGIPG
PPGPPGPPGPPGLGGNFAAQYDPGKGVGLGPGPMGLMGPRGPPGASGAPGPQGFQGPAGE
PGEPGQTGPAGARGPPGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGI
RGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGS
VGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEMGLPGVSGPVGPPGN
PGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGN
KGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGPSGPPGLRGSPGSRGLPGADGRAGVMGP
PGPRGATGPAGVRGPNGDAGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPGP
IGPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGV
QGGKGEQGPAGPPGFQGLPGPAGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGA
AGPSGPIGSRGPSGPPGPDGNKGEPGVLGAPGTAGPSGPSGLPGERGAAGIPGGKGEKGE
TGLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRGEAGPAGPAGPAGPRGSPGERGEVGP
AGPNGFAGPAGAAGQPGAKGERGTKGPKGENGPVGPTGPVGSAGPSGPNGPPGPAGSRGD
GGPPGATGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGLRGPRGDQGPVGRTGETGASGP
PGFAGEKGPSGEPGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVSGSVGEPGPLGI
SGPPGARGPSGAVGAPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNIGPVGA
VGAPGPHGPVGPTGKHGNRGEPGPAGVVGPVGAVGPRGPTGPQGIRGDKGEPGDKGPRGL
PGLKGHNGLQGLPGLAGQHGDQGAPGSVGPAGPRGPAGPSGPMGKDGRTGHPGSVGPAGV
RGSQGSQGPAGPPGPPGPPGPPGPSGGGYDFGYEGDFYRADQPRSPPSLRPKDYEVDATL
KSLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFST
GETCIRAQPENILAKNWYRNSKVKKHVWLGETINGGTQFEYNVEGVTTKEMATQLAFMRL
LANHASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSK
KTNEWKKTIIEYKTNKPSRLPILDIAPLDIGGADQEIRVDVGPVCFK
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctttgtggatacgcggactttgttgctgcttgcagtaacttcgtgcctagca
acatgccaatctttagaagaggcaactgcaagaaagggcccaactggagatagaggacca
cgtggagaaaggggtccaccaggcccaccaggcagagatggtgacgacggtatcccaggc
cctcctggcccacctggtcctcctggcccccctggtcttggcgggaactttgcggctcag
tatgaccctggaaaaggagttggccttggccctggaccaatgggtttgatgggacctaga
gggcctcctggtgcatctggagctcctggtcctcaaggtttccaaggacctgctggtgag
cctggtgagcctggtcaaactggtcccgcgggtgctcgtggtccacctgggcctcctggc
aaggctggtgaggatggtcaccctggaaaacctggacgacctggtgagagaggagttgtt
ggaccacagggtgctcgtggtttccctgggactcctggacttcccggcttcaagggcatt
aggggacacaatggtctggatggattgaagggacagcctggtgctccaggtgtgaagggt
gaacctggcgcccctggtgaaaatggaactccaggtcaaacaggagctcgtgggcttcct
ggtgagagaggacgtgtcggtgcccctggcccagctggtgcccgtggaagtgatggaagt
gtgggtcctgtgggtcctgctggtcccattgggtctgctggccctccaggcttcccaggt
gctcctggccccaagggtgaacttggacctgtcggtaatcctggtcctgctggtcccgcg
ggtccccgtggtgaaatgggtcttccaggtgtttctggccctgttggacctcctggtaac
cctggagccaacggcctgactggtgcgaagggtgctgctggcttgcccggtgttgctggg
gcacctggcctccctggaccccgtggtattcccggccctgttggtgctgctggcgctact
ggtgccagaggactcgttggtgaacctggtccagctggttccaaaggagagagtggcaac
aagggtgagcctggctctgctggtcctcaaggtcctcctggtcccagtggtgaagaagga
aagagaggccccaatggtgaagctggatctgctggcccctctgggcctcctgggctgaga
ggaagtcctggttctcgtggtctccctggagctgatggcagagccggtgttatgggccct
cctggcccccgtggtgctactggccctgctggtgtccgaggccccaatggagatgctggt
cgccctggagagcccggcctcatgggaccccgaggttttcctggtgcccctggaaatgtt
ggcccagctggcaaagaaggtcccatgggcctccctggcattgatggccggcctggacca
attggcccagctggagcaagaggagagcctggcaacatcggattccctggccccaaaggc
cccactggtgatccaggcaaaaatggtgataaaggtcatgctggtcttgccggtgctcgg
ggtgctccaggtcctgacggaaacaatggtgctcagggaccccctggaccacaaggtgtc
caaggtggaaaaggtgaacagggtcccgctggtcctccaggcttccagggtctgcctggc
cctgcaggtacagctggtgaagttggcaaaccaggagaaaggggtctccctggtgaattt
ggtctccctggtcctgctggcccaagaggggagcgtgggccccctggtgaaagtggtgct
gccggtccttctggtcctattggaagccgaggtccttctggaccccctgggcctgatgga
aacaagggtgaacctggtgtgcttggtgctccaggcactgctggtccatctggtcccagt
ggactcccaggagagaggggtgctgccggcatacctggaggcaagggagaaaagggtgaa
actggtctcagaggtgaaattggtaacccaggcagagatggtgcccgtggtgctcctggt
gctgtaggtgcccctggtcctgctggagccactggtgaccggggtgaagccggtcctgcc
ggtcccgctggtcctgctggtcctcgtggtagccctggtgaacgtggtgaggttggtccc
gctggccccaacggatttgctggtcctgctggtgctgctggtcaacctggtgctaaagga
gagagaggaaccaaagggcccaagggtgaaaatggccccgttggtcccacgggccctgtt
ggatctgctggcccatccggtccaaatggtccccctggtcctgctggcagtcgtggtgat
ggtggccctcctggtgctactggtttccctggtgctgctggacggactggtcctcctgga
ccctctggtatcactggccctcctggtccccctggtgctgctggtaaagaaggacttcgt
gggcctcggggtgaccaaggtccagttggccgaacaggagaaacaggtgcatctggtccc
cctggctttgctggtgagaagggtccctctggagagcctggaactgctggaccccctgga
acccctggtcctcaaggtcttcttggtgctcctggtattctgggtctcccaggctctaga
ggtgaacgtggtctaccaggtgtttctggatctgtgggtgaacctggacctctcggcatc
tctggtccacctggggctcgtggtccctctggtgctgtgggcgcacctggagtcaatggt
gctcctggtgaagctggtcgcgatggcaaccctgggaatgatggtcccccaggccgcgat
ggtcaacctggacacaagggagaacgcggttaccctggcaacattggtccagttggcgct
gtgggcgcacctggtcctcatggccccgtgggtcccactggaaaacatggaaaccgtggt
gaacctggtcctgctggtgttgttggtcccgttggtgctgttggtccaagaggtcctact
ggcccacaaggtattcgaggtgataaaggagagcctggtgacaaggggcctaggggtctt
cctggcttaaagggacacaatggactgcaaggtcttcctggtcttgctggccaacatggc
gatcaaggtgctcctggctctgtgggtcctgctggtcctaggggccctgctggtccttct
ggccctatgggcaaagacggtcgcactggacatcctggttcagttggacctgctggcgtt
cgtggctctcagggtagccaaggtcctgctggcccccctggcccccctggccctcctggc
cctcctggcccaagtggtggtggttatgattttggttacgaaggggacttctacagggct
gaccagcctcgctcaccaccttctctcagacccaaggattatgaagttgatgctactctg
aaatctctcaacaaccagattgagacccttcttactcctgaaggctctaggaagaaccca
gctcgcacatgccgtgacttgagacttagccaccccgagtggagcagtggttactactgg
attgaccctaaccaaggatgcactatggatgctatcaaagtatactgtgatttctctact
ggcgaaacctgtatccgggctcaacctgaaaacatcctagccaagaactggtacagaaat
tccaaggtcaagaagcacgtgtggttaggagaaactatcaatggtggcacccagtttgaa
tataatgttgaaggagtaaccaccaaggaaatggctactcaacttgccttcatgcgcctg
ctggccaaccatgcctctcaaaacatcacctaccactgcaagaacagcattgcatacatg
gatgaggagactggcaacctgaaaaaggctgtcattctgcaaggctccaacgatgttgaa
cttgttgccgagggcaacagcaggttcacttacactgttcttgtagacggctgctctaaa
aagacaaatgaatggaaaaagacaatcattgaatacaaaacaaataagccatcccgcctg
cctatccttgatattgcacctttggacatcggtggtgctgaccaagaaatcagggtggac
gttggcccagtctgtttcaaataa
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integrated database retrieval system
