Puma yagouaroundi (jaguarundi): 121038661
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Entry
121038661 CDS
T07555
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain isoform X1
KO
K19719
collagen type II alpha
Organism
pyu
Puma yagouaroundi (jaguarundi)
Pathway
pyu04151
PI3K-Akt signaling pathway
pyu04510
Focal adhesion
pyu04512
ECM-receptor interaction
pyu04974
Protein digestion and absorption
pyu05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
pyu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
121038661 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121038661 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121038661 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
121038661 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
121038661 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pyu00536
]
121038661 (COL2A1)
Glycosaminoglycan binding proteins [BR:
pyu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121038661 (COL2A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
121038661
NCBI-ProteinID:
XP_040344257
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MIRLGAPQTLVLLTLLVAAVLRCHGQDVQKAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDMKDCLSPETPFGECCPICSTDLATASGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG
APGPAGEEGKRGARGEPGGAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPG
DDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPSGEPGREGSPGADGPPGRDGAAGVKGDRGETGPVGAPGAPGPPGSPGPAG
PTGKQGDRGEAGAQGPMGPAGPAGARGIPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADQAAGNLRQHDAEVDATLK
SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPASVPKKNWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTK
HTGKWGKTMIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcggggctccccagacgctggtgctgctgacgctgctcgtcgccgctgtc
cttcggtgtcacggccaggatgtccagaaggctggcagctgtgtgcaggacgggcagagg
tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg
actgtcctctgcgacgacataatctgtgaagacatgaaagactgcctcagccctgagacc
cccttcggagagtgctgccccatctgctcaactgacctcgccactgccagtgggcaacca
ggaccaaagggacagaaaggagaacccggagacattaaggatattgtaggacccaaagga
cctcctgggcctcagggacctgcaggtgaacaaggacccagaggggatcgtggcgacaaa
ggtgaaaaaggtgcccctggaccgcgtggcagagatggagagcctgggacccctggaaat
cccggcccccctggtcctcctggcccccctggcccccctggcctcggtggaaacttcgct
gcccagatggccggaggatttgatgagaaggctggtggtgcccagatgggagtgatgcaa
gggccaatgggccccatgggacctcgagggcctccaggccctgctggtgctcccggacct
caaggatttcaaggcaaccctggagaacctggggaacccggtgtctctggtcccatgggt
ccccgcggtcctcctggcccccctggaaagcctggcgatgatggtgaagccggaaagcct
ggaaaatctggtgaaagaggccctcctggccctcagggtgctcgcggcttcccgggaacc
ccaggccttcctggtgtcaagggtcacagaggctacccaggtctagatggtgctaaggga
gaagctggtgctccaggtgtgaagggtgagagtggttcaccgggtgagaatggttctccg
ggcccaatgggtccccgcggcctgcctggtgagagaggacggactggccctgctggggct
gcgggtgcccggggcaacgacggtcaaccaggccctgctgggcctccgggtcccgtgggt
cctgctggtggtcctggcttccctggtgctcccggtgccaagggtgaagctggccccact
ggtgctcgaggccccgaaggcgctcaaggtcctcgcggtgaacctggtactcctgggtcc
cctggaccggccggtgcctctggtaaccctggaactgatggaattcctggagccaaagga
tctgctggtgctccgggcatcgctggtgctcccggcttccctgggccccgtggtccacct
ggccctcaaggtgcaactggtccgctgggcccgaaaggtcagacgggtgagcctggtatt
gctggcttcaaaggcgaacaaggccccaagggagagcctggccctgctggcccccaagga
gcccctggtcctgctggtgaggaaggcaagagaggtgcccgtggagagcctggtggtgct
gggcctgttggtccccctggagaaagaggtgctcctggcaaccgtggcttcccaggtcaa
gatggtctggcaggtccaaagggagcccctggagagcgagggcccagcggccttgctggc
cccaagggtgccaacggcgatcctggccgtcccggagagcctggccttcctggagcccgg
ggtctcactggacgccccggtgatgccggtcctcaaggcaaagttggtccttctggagcc
cctggtgaagatggtcgtcctggacctccaggtcctcagggtgctcgtgggcagcctggc
gtcatgggtttccccggccccaaaggtgccaatggcgaacctggcaaggctggtgagaag
ggacttcccggtgcccctggactgagaggtcttcccggcaaagatggtgagaccggtgct
gcggggccccccggacccgctggacctgccggtgaacgaggcgagcagggtgcccctggg
ccatctgggttccagggacttcctggccctcccggtcccccaggtgaaggtggaaagcca
ggtgaccagggtgttcctggtgaagctggagcccccggcctcgtgggtcccaggggtgaa
cgaggtttcccaggtgaacgtggctctcccggtgcccagggcctccagggtccccgcggc
ctccctggcactcctggcacggacggccccaaaggcgcatctggcccagccggcccccct
ggggctcagggccctccaggtctgcaagggatgcctggtgagaggggagcagctggcatc
gctgggcccaagggagacaggggtgacgttggtgagaaaggccccgagggagcccctggg
aaggacggtggacgaggcctgactggtcccattggcccccctggccctgccggtgccaat
ggtgagaagggagaagttggacctcctggtcctgcgggaactgctggtgctcgtggagcc
ccgggtgaacgtggagagaccggtccccccgggcccgctggattcgcaggacctcccggt
gctgatggccagccaggtgccaagggcgagcaaggagaggctggccagaaaggtgatgct
ggtgccccgggtcctcagggcccctctggagctcctggacctcagggtcctactggtgtg
actggtcctaaaggagcccgaggtgctcaaggccccccgggagccaccggattccctgga
gctgctggccgtgtcggacccccaggctccaatggcaaccctggaccccctggtccccct
ggtccttctggaaaagatggtcctaaaggtgctcgaggagacagcggcccccctggccgt
gctggcgaccctggcctccaaggtcctgccgggccccctggcgagaagggagagcctgga
gatgatggtccctctggtcccgatggtcctccaggtccccaaggtctggctggtcaaagg
ggcattgttggtcttcctgggcaacgtggtgagagaggattccctggcctgcctggccca
tcgggtgagcctggcaagcagggagctcccggagcatctggagaccgaggtccccccggc
cccgtgggtcctcctggcctgactggtccttctggcgaacctggacgagagggaagccct
ggtgctgatggcccccctggcagagatggtgcggctggagtcaagggtgatcgtggtgag
actggtcccgtgggtgctcctggagcccctgggccccctggctctcctggccccgctggc
ccaactggaaagcagggagaccgaggagaagctggcgcacaaggccccatgggccctgca
ggaccagccggggcccggggaatcccaggtcctcaaggtccccgaggtgacaaaggagaa
gctggagaggctggcgagaggggcctgaagggacaccgtggcttcactggtctgcagggt
ctgcccggccctcctggtccttctggagaccaaggtgcttctggtcctgctggtccttct
ggccctagaggtcctcctggtcccgtcggtccctctggcaaagatggtgctaatggaatc
cctggccccattggacctcctggtccccgcggacgttcgggcgaaactggcccagctggt
cctcctggaaaccccggaccccctggccctccaggtccccctggccctggcatcgacatg
tctgcctttgctggcctaggccagagagagaagggccccgaccccctgcagtacatgcgg
gctgaccaggcagctggcaacctgagacagcacgacgccgaggtggatgccacgctcaag
tccctcaacaaccagattgagagcatccgcagccccgagggctcccgcaagaaccccgct
cgcacctgccgggacctgaaactctgccaccctgaatggaagagcggagactactggatt
gaccccaaccagggctgcaccttggacgccatgaaggttttctgcaacatggagactggc
gagacctgcgtctaccccaacccagcgagtgttcccaagaagaactggtggagcagcaag
agcaaggacaagaagcacatctggtttggagaaaccatcaacggtggcttccacttcagc
tatggagatgacaacctggctcccaacactgccaacgtccagatgaccttcctacgcctg
ctgtccaccgagggctcccagaatatcacctaccactgcaagaacagcattgcctacctg
gatgaagcggctggcaacctcaagaaggccctgctcatccagggctccaatgatgtggag
atccgggctgagggcaacagcaggttcacatatactgtcctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactatgatcgagtaccggtcacagaagacctcgcgtctc
cccatcattgacattgcacccatggacataggagggcctgagcaggaatttggtgtggac
atagggcctgtctgcttcttgtaa
DBGET
integrated database retrieval system
