Pseudomonas zarinae: HU749_011730
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Entry
HU749_011730 CDS
T07889
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
pza
Pseudomonas zarinae
Pathway
pza03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HU749_011730 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pza03400
]
HU749_011730 (uvrC)
DNA repair and recombination proteins [BR:
pza03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HU749_011730 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
GIY-YIG
UVR
HHH
HHH_2
HHH_3
5_3_exonuc
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
QXH97027
LinkDB
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Position
2634346..2636169
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AA seq
607 aa
AA seq
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MTDLFDPSAFLSTCSGRPGVYRMFDGDARLLYVGKAKNLKKRLASYFRKTGLAPKTAALV
GRIAQIETTITANETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDGAFPRLSIHRG
AKKAKGRYFGPYPSAGAIRESLSLLQKTFFVRQCEDSYYKNRTRPCLQYQIKRCKAPCVG
FVEPQVYAEDVRHSVMFLEGRSNALTDELSAAMEDAAVNLEFERAAELRDQISLLRRVQD
QQSMEGGSGDVDVIAAFINPGGACVHLISVRGGRVLGSKNFFPQVGIEEDVAEVMAAFLG
QYYISSPERDLPAELIVNVVHEDFPALIEAIDKLRGRELTISHRVRGTRARWQQLAVTNA
EQALGARLANRQHVAARFEALADVLNLDEPPQRLECYDISHSSGEATVASCVVFGPEGPI
KSDYRRYNIEGVTPGDDYAAMHQALMRRFGKLKDGEGKLPDILLVDGGKGQLSMARDVLN
ELMVPDLILLGVAKGATRKAGFETLYLNDAAHEFTLKGDSPALHLIQQIRDEAHRFAITG
HRARRGKTRRTSTLEGVAGVGPTRRRDLLKHFGGLQELSRASIEEIAKAPGISKKLAESI
YANLHSE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctgtttgatccaagcgcgttcctgtccacttgcagcggtcgccccggcgtg
taccgcatgttcgacggcgacgcacgcctgctttatgtcggcaaggccaagaacctcaag
aagcgcctggccagttactttcgcaagaccggcctcgcgccgaagactgccgccctggtg
gggcgcatcgcgcaaatcgaaacgacgatcaccgccaatgaaaccgaggcgctgctgctt
gagcagacgctgatcaaggaatggcgcccgccgtacaacatcctgctgcgcgacgacaaa
tcctacccctacgtgtttctgtccgacggggcctttccgcgcctgagcattcatcggggt
gccaaaaaggccaagggtcggtatttcggtccttatcccagcgccggggcgattcgtgaa
agcctcagcctgctgcagaagacctttttcgttcgccagtgtgaagacagctactacaag
aaccgtacccggccctgcctgcaataccagatcaaacgctgcaaggcgccttgcgtgggg
tttgtcgagccgcaggtctacgccgaggacgtgcgtcactcggtgatgttcctggagggc
cgcagcaatgcgctgaccgatgaactgtcggcagccatggaggacgcggcggtcaacctt
gagttcgagcgggccgccgagctgcgcgaccagatcagcctgctgcgccgcgtgcaggac
cagcaaagcatggaagggggcagtggtgatgtcgatgtgatcgctgcgttcatcaacccg
ggcggcgcttgcgtgcatttgatcagcgtgcgcggcggtcgtgtgctgggcagcaagaac
ttctttccccaagtgggtatcgaggaggacgtggctgaggtcatggcggcgtttctgggc
cagtactacatcagcagcccggaacgcgacttgcctgccgagttgatcgtcaacgtggtc
cacgaggatttcccggctctgatcgaagccatcgataagcttcgcggtcgtgaactgacc
atcagccaccgcgttcgtggcacccgtgcccgttggcagcaactggccgtgaccaacgcc
gaacaggccctcggcgcgcgcctggccaaccgtcaacacgtcgcagcgcggttcgaggcc
ctggccgatgtcctcaacctggacgagccgccgcaacggctggagtgctacgacatcagc
cattccagtggcgaggcaaccgtggcgtcctgcgtggtgttcggtccggaaggcccgatc
aagtccgattaccgccggtacaacatcgaaggcgtcacgcccggcgatgactacgcggcc
atgcaccaggcattgatgcggcgtttcggcaagctcaaggacggggagggcaagttgcca
gacatcctcctggtggacggtggcaagggccaattgtccatggcccgcgatgtgctcaat
gagctgatggtgcccgacctgatcctgctgggcgtggccaagggcgcgacgcgcaaggcc
ggcttcgagaccttgtacctgaacgacgcagcccatgagttcaccctcaagggcgattcg
ccagcgttgcacctgatccagcagatccgtgacgaagcccaccgtttcgccatcaccgga
caccgtgcccgccgtggcaagacgcgccggacgtctacactggaaggtgtggcaggcgtc
ggcccgacgcgccgtcgcgacttgttgaaacattttggtggattgcaggaactgtctcgt
gccagcatcgaggagatagccaaagcacccggtatcagtaaaaagctcgctgagtcgatt
tatgcaaacctgcacagcgagtag
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