KEGG   Quercus lobata (valley oak): 115952839
Entry
115952839         CDS       T07350                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115952839
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qlo03041]
    115952839
Spliceosome [BR:qlo03041]
 Complex A
  U2 snRNP components
   U2 related factors
    115952839
 Complex B
    115952839
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus PCF11_charged zf-CCCH_DUS3L zf-CCCH_4
Other DBs
NCBI-GeneID: 115952839
NCBI-ProteinID: XP_030926029
LinkDB
Position
7:complement(40662441..40670526)
AA seq 333 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLLLSNMYQRPDMLTP
APALNPQTQPNLDPRHIQDHFEDFYQDLFDELSKYGHLESLNICDNLADHMVGNVYVQFR
EEEHAANALRNLNGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS
KELRRKLFGRNRRRRSRSRSRSRSPVRNRGYEEHSRGGRGFGRGGGGGRGFGRRDDDRDF
RSFHDRGRRPRSRSPGRRGERSRSPGGRRNRSPVRESSAERRAKIEQWNREREQTESGVP
NHEDNIDNDSNGFEQNDQYNEPEQHQQHDRYDD
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcgtcgatattcggaactgagaaagacagggtgaactgccctttc
tatttcaagatcggagcgtgcaggcacggcgaccggtgctcgaggctccacacgaagccc
acaatcagcccaacgctccttctctccaacatgtaccagcgccctgacatgctcacccca
gccccggctcttaacccccaaactcagcccaatctcgaccctcgccacatccaagaccac
ttcgaagacttctaccaagacctcttcgacgagctcagcaagtacggccacctcgagagc
ctcaacatctgcgataacttggctgatcacatggttgggaatgtgtatgttcagtttcgt
gaggaggagcacgcggcaaatgcgctgaggaatctcaatggaaggttctactcagggcgt
cctatcatcgttgacttctcgccagtcactgattttcgtgaagctacatgtagacagtat
gaggaaaatgtgtgtaatcgtggtggctactgcaacttcatgcatctgaaaaagattagc
aaggagttgaggaggaaattatttgggagaaacagaagaaggcgtagtcgcagtcgaagc
aggagccgcagtcctgttaggaaccgtggttatgaagagcattcacgtggtggccgtggt
tttggtagaggtggtggtggtggtcgtggatttggtagaagagatgatgacagagatttc
cgttccttccatgataggggcaggaggccaagaagccgcagtcctggacgtagaggggaa
cgaagcagaagccctggaggaaggaggaataggagtcctgtcagggaaagtagtgctgaa
agaagggctaagattgagcaatggaatagggaaagggaacagacagaatctggtgttccg
aaccatgaggataacattgacaatgacagcaatggctttgaacagaatgatcagtataat
gagcctgagcaacatcagcagcatgatagatacgatgattag

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