KEGG   Quercus lobata (valley oak): 115960230
Entry
115960230         CDS       T07350                                 
Name
(RefSeq) tubulin alpha chain-like
  KO
K07374  tubulin alpha
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo04145  Phagosome
qlo04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115960230
  09142 Cell motility
   04814 Motor proteins
    115960230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qlo03019]
    115960230
   03036 Chromosome and associated proteins [BR:qlo03036]
    115960230
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:qlo04812]
    115960230
   04147 Exosome [BR:qlo04147]
    115960230
Messenger RNA biogenesis [BR:qlo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     115960230
Chromosome and associated proteins [BR:qlo03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     115960230
Cytoskeleton proteins [BR:qlo04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    115960230
Exosome [BR:qlo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115960230
  Exosomal proteins of other body fluids (saliva and urine)
   115960230
  Exosomal proteins of colorectal cancer cells
   115960230
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 115960230
NCBI-ProteinID: XP_030934878
LinkDB
Position
9:46429885..46433602
AA seq 450 aa
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTIGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGNYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVAILLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA
SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEADEGEDDEGDEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgagagagtgcatttcaatccacattggtcaagccggtattcaagtcgggaatgcctgc
tgggaactctattgccttgaacatggcatccagcctgatggccaaatgctaagtgacaag
actattggtggaggtgatgatgccttcaacacctttttcagtgaaactggtgctgggaag
catgtccctcgtgctgtctttgttgatcttgagcccactgtcattgatgaagtgaggact
gggaattaccgccagctcttccacccagaacagcttatcagtggcaaggaagatgctgct
aacaactttgcccgtggccactatactattggcaaggagattgttgatctgtgcctggac
cgtatcagaaagcttgctgacaactgcactggcctccaaggatttctggtttttaacgct
gttggtgggggcactggttctgggcttggctcccttctcttagagcgtttgtctgttgat
tatgggaagaaatcaaagctgggtttcacagtttacccttctccacaggtctccacatct
gttgttgagccctacaacagtgtcctctccacccactccctcctggaacacactgatgtg
gctatacttttggacaatgaggccatctatgatatttgcaggcgctcccttgacattgag
cgacccacctacaccaacctcaaccgacttgtctcccaggtgatttcatccttgacggcc
tctcttagatttgatggtgcactaaatgtggatgtgactgaattccaaaccaacttggtt
ccctaccccaggatccactttatgctttcctcttatgcaccagtcatctctgctgagaaa
gcatatcatgaacaactttcagtagctgaaattaccaacagtgcttttgagccttcttct
atgatggcaaaatgtgatcctcgtcatggaaagtacatggcatgctgcttgatgtaccgt
ggtgatgttgtgcctaaggatgtcaatgctgccgttgctacaatcaagaccaagcgcacc
attcagtttgttgactggtgccccactggatttaagtgtggtatcaactaccagcctccc
actgttgttccaggaggagaccttgccaaggtgcagagagctgtttgcatgatctcaaac
tctaccagtgtagctgaggtgttctcccgcattgaccacaagtttgatctcatgtatgcc
aagcgtgcctttgtgcattggtatgttggtgagggaatggaggaaggagaattctctgaa
gctcgtgaggaccttgctgccttggagaaggattatgaggaggttggtgctgaggcagat
gagggtgaggatgatgaaggtgatgagtactaa

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