Quercus lobata (valley oak): 115963232
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Entry
115963232 CDS
T07350
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU70 isoform X1
KO
K10884
ATP-dependent DNA helicase 2 subunit 1
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
115963232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qlo03041
]
115963232
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115963232
Spliceosome [BR:
qlo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115963232
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
115963232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_C
SAP
Motif
Other DBs
NCBI-GeneID:
115963232
NCBI-ProteinID:
XP_030938023
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All DBs
Position
10:complement(44130609..44152577)
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AA seq
637 aa
AA seq
DB search
MELDPDDVFRDDEEDADNEFYREKEATKTLLVYLVDASPKMFSTSCPSGDQKDETHFQIA
VSCISQSLKTQIINRSYDEVAICFFNTREKRNLQELNGVFIFNVAEREYLDRPTARLIKE
FDCIEERFMKEIGSQNGIISGTRENSLYNALWVAQALLRKGSAKTADKRILLFTNEDDPF
GNIKGATKIDMTRTTLQRAKDAQDLGISIELLPLSQPDEEFNVSLFFADLIGLEGDDLAQ
FLPLVGEKLVDMKDQLRKRMFTKRIVRKIAFSIANGLSIELNTYALIRPTIPGAITWLDS
VSNCPLKAERSFICSDTGALVQEPLKRYQPYKNENIKISVEELSEIKRISTGQLRLLGFK
PLSCLKDYHNLRPSTFIFPSDEEVFGSTCIFIALHRSMLRLERFAVAFYGSSSHPQLVAL
IAQHYQFPENSQKEIISHGGQVEPPGMHMIYLPYSEDIRHVEELYSDSNGAAPKATDDQI
EKATALMKRIDLKDFSVCQFSNPALQRHYAVLQALALEEPDIPETIDETLPDEEGMAKPG
VVSAVEEFKLSVYGDNYDEEKELVGNGKASEASKKRKAIADNAVKESANYDWDDLADNGK
LKDLTVVELKYYLTAHSLPVAGKKEALISRILTHMGK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggaattggacccagatgatgtgttcagagacgacgaagaagacgccgataatgaattc
tatcgggaaaaggaggccaccaaaacgcttctggtttaccttgtcgatgcttcccccaaa
atgttctccacttcttgcccttccggagatcaaaaggatgaaactcattttcagattgct
gttagttgtatctcgcagtcgctgaagacccagatcattaatagatcgtatgatgaagtt
gctatttgcttctttaacaccagggaaaagagaaatttgcaggagttaaatggagttttt
atatttaatgttgctgagagggagtatctagacaggccaacagcaaggcttataaaagaa
tttgattgcatagaggaaaggtttatgaaagaaattgggagtcagaatggtattatctct
gggactcgagaaaattctctttacaatgctctttgggtagcacaagcacttctgcgtaaa
ggatctgcaaagacagctgataaacggatacttctttttacaaatgaagatgatcctttt
gggaatatcaagggagcgacaaaaatagatatgacaagaaccacattgcagagagctaaa
gatgcccaagatctaggcatctcaattgaacttcttcccttgagtcagcctgatgaggag
ttcaatgtttcacttttctttgctgatttgattggattagaaggggatgaccttgctcag
tttttacccttagtgggagagaagttggtagatatgaaggatcagctgagaaagcgtatg
ttcacgaagcgcatagttagaaaaattgcattttcaattgctaatggattatcaattgaa
ctgaatacatatgctttgatacgtcccactattccaggagcaattacctggcttgattct
gttagcaattgtcccttgaaggctgaaagatctttcatctgttcggatactggtgcattg
gtgcaagaacctcttaaacgctaccaaccttacaaaaatgagaatattaaaatttcagtg
gaggagctatcagagataaaaagaatttctactggacagcttcgtcttctaggattcaag
ccattaagttgcttgaaagattatcataacttgaggccatcgacatttatttttcccagt
gatgaggaagtgttcggtagtacttgcattttcattgccctgcacagatcgatgttacgg
ctcgagcgatttgcagttgcattttatggcagttcttctcatcctcagctggttgccctt
attgctcaacattaccaatttcctgaaaattctcagaaagagattatcagccatggtggt
caggttgagccgccaggaatgcacatgatatatcttccatactctgaagacatcagacat
gttgaagagctttattcagattcaaatggtgctgcaccaaaagcaactgatgatcaaatt
gagaaggctactgctttaatgaaacgtatcgatttgaaagatttttcagtatgccaattt
tctaaccctgccttgcagaggcactatgcagtattgcaggccttggctttggaggagccc
gacatcccagaaacaatagatgaaaccctccctgatgaggaaggcatggctaaaccaggg
gtagttagtgcagtagaagaattcaagctttctgtctacggcgacaactatgatgaggaa
aaggaacttgtgggaaatggaaaagcaagtgaggcctccaaaaaacgaaaagctattgct
gataatgcggttaaggagtctgcaaactatgattgggatgaccttgcagacaatgggaag
ttgaaggatttgacggtggtggagttgaaatactacttgacagcacacagccttcctgtt
gctggaaagaaagaggctttgatcagcaggatattaactcacatgggaaagtaa
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