Quercus lobata (valley oak): 115975320
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Entry
115975320 CDS
T07350
Name
(RefSeq) protein SEH1
KO
K14299
nucleoporin SEH1
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115975320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115975320
04131 Membrane trafficking [BR:
qlo04131
]
115975320
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115975320
Membrane trafficking [BR:
qlo04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
115975320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
ANAPC4_WD40
WD40_CDC20-Fz
WD40_Prp19
EIF3I
Beta-prop_Aladin
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
WDR55
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_WDR75_2nd
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
115975320
NCBI-ProteinID:
XP_030951915
LinkDB
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Position
2:complement(31089355..31097672)
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AA seq
329 aa
AA seq
DB search
MEKSLATFDNGTTCSAWNHCGQRLATGSADGTLSIFDSQDPASTSSSFTCTSKSRIHEAQ
AGIVRVVWVPPEYGDAVACICADGTMSLWEEVVEDAQPLKWKLCESFKSNSSKVLDIQFG
ISLTSLKMVAAHSDGHVKVFELLDSLEMKNWQLQAEIQNVIESVSTFGKASCISASISWN
PHRGESQDSSFVLGFNSDTPQLNSSKVWEFDQAHQRWLPVAELALPGDKGDQVHAVAWAP
NIGRPYEVIAVATLKGIAIWHLGLDPDLDGRLSVEKVALLSGHEGEVWQMEWDMSGMTLA
TTGNDGMVRLWQANLNGVWHEQAAFEPTS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatctttggcgacctttgataatggcacaacttgctccgcctggaaccactgt
ggccagagactcgccactggctccgccgacggaaccctctccatattcgattctcaggac
ccagcttctacttcttcttccttcacctgcacttccaaatctaggatacatgaggctcag
gctggcattgtgagggttgtttgggttcctccggaatatggagatgcagttgcatgcatt
tgcgcagatggaaccatgtcattatgggaggaggtcgtagaagatgcgcaacctcttaaa
tggaagctgtgtgaaagctttaaaagcaattcatctaaagtgctggatatccaatttgga
atctctctgacaagtttgaaaatggttgctgcacattcagatggccatgtgaaagtcttt
gagctcctggattccttggagatgaagaattggcaacttcaggctgaaattcagaatgtt
attgagtcagtctctacatttggtaaggcttcgtgcatatctgcatctatatcatggaat
ccacacagaggtgaaagccaagattcaagtttcgttttgggtttcaattcagatacaccc
caactaaattcctccaaggtatgggaatttgaccaggctcaccaaagatggcttccagtt
gcagagttggcattgcctggggacaaaggtgatcaagttcatgctgtcgcatgggcacca
aacattggcagaccatatgaagtaattgctgttgcaactctcaagggaattgcaatatgg
catcttgggttggaccctgacctagatggaaggctctcagtggagaaagttgcattgctt
tctggtcacgaaggggaggtatggcagatggaatgggacatgagtggtatgaccttggca
accacaggaaatgatggcatggtacgattgtggcaggcaaacttaaatggagtttggcat
gaacaggctgcctttgagcccacttcatag
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integrated database retrieval system