KEGG   Quercus lobata (valley oak): 115982768
Entry
115982768         CDS       T07350                                 
Name
(RefSeq) splicing factor 3B subunit 6-like protein
  KO
K12833  pre-mRNA branch site protein p14
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115982768
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qlo03041]
    115982768
Spliceosome [BR:qlo03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    115982768
 Complex B
    115982768
 Complex C
   U2 SnRNP specific factors
    115982768
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_7 RRM_10 DUF1177
Other DBs
NCBI-GeneID: 115982768
NCBI-ProteinID: XP_030961374
UniProt: A0A7N2KMM7
LinkDB
Position
1:16844949..16845794
AA seq 124 aa
MASISLRKGNTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRVGTSKDTRGTA
FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDHKKKEDEITKLQEKYGVS
TKDK
NT seq 375 nt   +upstreamnt  +downstreamnt
atggcgagcataagccttcgcaagggaaacacgcggctaccaccggaggtgaaccgcgtg
ctctacgttcggaacctgccgttcaacatatcgagcgaagagatgtacgacatattcggc
aagtacggcgccattcggcagatccgagtcggcaccagcaaggacactcgcggcaccgcc
ttcgtcgtctacgaggacatctacgacgccaagaccgccgtcgatcacctctccggcttc
aacgtcgccaaccgctacctcatcgtgctgtactaccagcaagccaagatgagcaagaag
ttcgatcacaagaagaaggaggacgagattaccaagcttcaggaaaagtatggtgtctcc
accaaagataagtag

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