Quillaja saponaria (soapbark tree): O6P43_010257
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Entry
O6P43_010257 CDS
T09778
Name
(GenBank) Nuclear pore complex protein
KO
K14303
nuclear pore complex protein Nup160
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
O6P43_010257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_010257
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_010257
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
O6P43_010257
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
O6P43_010257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_Nup120_160
TPR_NUP160_120_M
NUP160_helical_2
HEAT_Nup120
TPR_Nup160_C
Motif
Other DBs
NCBI-ProteinID:
KAJ7972354
UniProt:
A0AAD7VE75
LinkDB
All DBs
Position
4
Genome browser
AA seq
1366 aa
AA seq
DB search
MGSRSTLAGKEVPIIGSDSVKWIELSVPSSTTAAAAAAVAGDSCSTTLGPPTKDCASCFV
IGDPSTYLIWRIHKTQPHTLELMELCASKEFPGLGLRITFPDALCPFAFIWKSELIGTTR
DPYLLYALTVSGVAYLLNIKNVSTYGSCSIFPRNEIIEYNVHSYSNHVAISAVTATAGCL
VIGRTDGSVFCFQLGVVEQSAPGFVHELRDDSGIGRLWGFMSRKIFSHTMSIPTITGATY
VRLWVGHPHHDSSIIPLAILYSDSSEFSSETIYIYNIQCTLGDKMILLMDPSVQNILLEE
GGCIDVKLDSDKIWILKDDELLRRTFHTNVNGDEACSYALQEEFIADQLLQSSEHNSDDL
LRITHSVFSSAKDHIVPFVSSIFLRRLLLPGVHHSTALRATMMEYNRHFAESEFQLFTAD
GLKKEILTLIEHEGGTEKMSKLYCWKNFCTRYFNNWCKNNSPCGLFVDSSVGSVGLIRKN
SISLFRCLENIERIIEGSSDEVDELTGLVDLFDDVLEREILIEMLRCVINFSQQLGKSAY
CIFYESLVNTLVGSPEDIIPGIVKVAKVMFESALDFLLFLRYLVDISGQIHLSHDDITRI
QLELVPMIQDNIFEWLLVIFFSTTPSVPAAIEDFSSKLSSLQIDSRVGKRSWNEKLGRCD
FTLAFILLLNIGSSSGNQSLHSSECLSNRHTIIDGVREFASWIIWGNAGESSSILSRSTD
LALILFRNCQYDAAEYLLTIVEAHLRKEKTSQSIQDADGQWCILHHLLGCCFLAQLQCGL
HKMLKEKKVHDAVRCFFRAASGKGSSDALQNLSHDAGLPLPAFAGSVSTAAWKLQYYQWA
MQIFELYNISEGACQFALAALEQVDEALSEEDTHSNADSLNESVISMKGRLWANVFKFSL
DLSHYYDAYCAIISNPDEESKYICLRRFIIVLYERGAIKILCSNQLPLIGLTEKVEQELA
WKAERSDISSKPNLYKLLYAFAMHRHNWRLASSYMYLYSARLRNEAALKDDKCSLLILQE
RLNALSTATNALHLVRPAFAWIDPLVEGNSFRRQSFPSKKARRTAGEHSESDAQPQCWQS
SIDLEKLENEFVLTSAEYLLSLANVKWTFSGIHRPPLDLVDLLVEKNLYDMAFTVILRFF
KGSGLRRELERVFSALSLKCCPHKVDSPWAEMHGHLLTSSKGEVVVHGSPVTGPTTQQSD
RNSNWASLELYLEKYRGFHARVPVIVAETLLRTDPQIELPLWLVQMFKEGQKERIWGMAG
RESSPAALLRLYVKFGRYTEATNLLLEFIESFASLRPSDITKRKTPLVVWFPYTTIEQLY
LQLEELISMGHMVDQCGKLKKLLRGALQSHLNLLKVDSNDVISASG
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcaggtcgacgttggccgggaaggaagttcctatcattggcagcgattccgtc
aaatggattgagttgtcggtcccttcttctactactgcagctgcagctgctgctgttgct
ggtgatagttgttcgactactcttggccctccaactaaggattgcgcctcttgcttcgtc
atcggagatccttctacctatctcatatggagaattcacaagactcaacctcatactctg
gagttaatggagctctgtgcttccaaagaatttcctggacttggactgagaattactttc
ccagatgctctttgtccgtttgcttttatctggaaaagcgagcttattggaactactagg
gacccgtacttgctttatgctttgactgtttccggagttgcttaccttctgaacattaaa
aatgtttctacatatggttcctgctctattttcccaaggaatgagataatagagtataat
gtccacagttattccaatcatgtagctatatctgctgtaacagcaactgctggatgtctt
gtcattggcagaactgacggatctgttttctgttttcaacttggtgtagttgagcaaagt
gctcctggttttgtgcatgagctacgggatgattctggaattggtcgtttatggggtttt
atgtcacgcaaaatcttcagtcataccatgagcattccaacaataacaggagccacatat
gtaaggttatgggtgggccatcctcatcatgattcaagtataattcctttggcgatcttg
tacagtgattcttcggaattcagctcagagacaatctatatatataacatccaatgtact
ttgggggacaagatgattttgttaatggatccatcagtccaaaatatcctcttggaagag
ggagggtgcatcgacgtgaaacttgattcagacaagatatggatacttaaagatgatgag
ttgttgcggcgcacatttcatacaaatgtcaatggggatgaagcatgttcttatgcttta
caggaagagttcattgctgatcagttattacaaagttctgaacacaattcagatgatctt
ctgcggatcacacattcagtattttcatctgccaaggatcatattgtgccgtttgtatct
tccattttcttacgcaggctgctgcttcctggggttcatcacagtactgctttgcgtgca
actatgatggagtataacagacattttgctgaatccgagttccaactatttactgctgat
ggactgaaaaaggaaatccttacacttattgaacatgagggtggcactgagaaaatgtcc
aaactctattgctggaagaatttctgtacccgctacttcaataattggtgcaagaacaac
tccccatgtggtttatttgttgacagctctgtcggttctgttggtttaatcagaaagaat
tcaatctcacttttccgttgtttggagaatattgagcggattatagagggttcatctgat
gaagttgatgagctcacaggacttgtggatttatttgatgatgtccttgaacgtgaaatt
ctaattgaaatgctgagatgtgttataaatttcagccaacagttgggaaaatcagcttat
tgtatattctatgaatcacttgtaaacacactagttggctctccagaagatattattcct
ggtatagtgaaggtagccaaagtgatgtttgagtcagccttggactttcttttatttcta
agatacctagtggacatcagtgggcagatccatttgtcgcatgacgatataaccagaata
caacttgagttggtcccaatgatccaagataatatttttgagtggcttcttgtcatcttc
ttttccaccacaccttctgtacctgctgctattgaagatttcagttccaaactttcatca
ttacaaattgatagcagagtggggaaacggtcatggaatgaaaaacttggcagatgtgac
tttacattggcttttatactcttgttaaatattggaagttcgtctggaaaccagagcctt
cattcttcagaatgcctttctaataggcatactattattgatggggtgcgtgagtttgct
agttggatcatttggggcaatgctggagagtcttcttctatcttgagccgttcaactgat
cttgcattgattctatttaggaattgccagtatgatgctgctgagtatttgcttactatc
gtggaggcacatttgcgaaaggagaagacatctcaaagtattcaagatgcagatggtcaa
tggtgcatacttcatcatcttcttggatgttgctttcttgctcagttgcaatgtggattg
cataaaatgttgaaggagaaaaaagtccatgatgctgttagatgtttcttcagggctgct
tctggaaaaggttcatctgatgctctgcaaaatctgtctcatgatgcaggactgccactg
ccagcttttgctggttctgtatcaactgctgcatggaagctccagtattatcaatgggca
atgcagatatttgaactatataatattagtgaaggtgcttgccagtttgcacttgcagca
cttgagcaagttgatgaagctttatctgaggaagacacacatagcaatgcagattcactc
aatgaatcagtcatttctatgaaaggacggctctgggcaaatgtctttaagttttcttta
gatctcagtcactattatgatgcatattgtgcaataatttcaaatccagacgaggagagc
aaatacatctgcttgaggcgtttcataattgttctttatgaacgtggtgctataaagatt
ctttgtagtaatcaactacccctcattggtttaacagagaaggtagagcaagagcttgcc
tggaaggctgaacgttcagatatttcatcaaagccaaacttatataagttgctctatgca
tttgcaatgcatcggcacaattggcgacttgcatcaagttacatgtacttgtattcagct
cgcttgaggaatgaagcagccctaaaagatgacaagtgcagtttattgatattgcaagag
agattgaatgcactttctactgccaccaatgcactgcatcttgttcgtcctgcatttgcc
tggattgatccactggttgaaggaaattcttttcgtcgtcagagtttcccgagtaaaaag
gctagaagaacagcaggagaacattctgaaagtgatgctcagcctcaatgctggcagtct
tctattgatcttgagaagcttgagaatgagtttgtgctaacttcagcagaatatttgcta
tcgttggcaaatgtgaaatggacattttctggaattcatagacccccattggatttggtg
gacctccttgttgagaaaaacctatatgatatggcattcacagtgattctcaggttcttc
aagggttcgggtttgaggagggaactggaaagagtattctctgctttgtcactgaaatgc
tgtcctcataaagtagattctccttgggctgagatgcatggtcatttgttgacttcatcg
aagggtgaagtggttgttcatggttcacctgttacaggtcctacaactcaacaatctgat
cggaatagtaattgggcatctctcgagctttaccttgaaaaatataggggatttcatgct
agggtgccagtaattgttgctgaaactcttcttcgtacagatcctcaaatcgaattgcct
ctttggctggtacagatgttcaaggagggtcaaaaggaaaggatctgggggatggctggc
cgagaatcaagtcctgcagccttgttgcgactgtatgttaagtttggtcgatacacagaa
gctacgaatctgttgcttgaattcatagaatcatttgcatcactgagaccatctgacata
accaaacggaaaacaccattggttgtttggtttccgtacacaacaattgagcaactatat
ttacaacttgaggaattgattagtatgggtcacatggtagatcaatgtggtaagctcaaa
aagctgttacgtggagctttgcaaagtcatctgaatctgctaaaggtggactcaaatgat
gtgatttctgcatctggttga
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