Quillaja saponaria (soapbark tree): O6P43_027010
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Entry
O6P43_027010 CDS
T09778
Name
(GenBank) putative CCR4-NOT transcription complex protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6P43_027010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_027010
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
O6P43_027010
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
O6P43_027010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NOT1_connector
Motif
Other DBs
NCBI-ProteinID:
KAJ7950880
UniProt:
A0AAD7PDK1
LinkDB
All DBs
Position
11
Genome browser
AA seq
2401 aa
AA seq
DB search
MTTMTKFSSTASNQIRFLLQNLNERNFESIFQELCLFLQFGTDGSILLLQTCLDHLNFFN
RDINNMHQEPILASIIKYLLDKPNFSTVFSQSLKMTEISEGFLQKFSNVLDLSLSEKIGV
SLALSDSENLDTKMIGKNFCMAQIEELCANPISLSSCEKIQNVVTFLQRSEGLSKHVDSF
MQMLSLMQDTTPFTLTPLLSDDMREANFLRNLDLCNDSGENDFDTILADIQMELSIGDIV
KELGYGCTVNVSQCMEIFSLFLPLTDVTLAKVLGTIAHTYAGLEDNQNFFLTFSMAIGCS
TLSELPPLNSWNIDVLIYTIRHLAPGTNWLRVIENLDHEGFYLPCEEAFSFLMSVYKHAC
QESFPLHAICGSVWKNVEGQLSFLKYAVSAPPEVFSFAHSIRKLDYVDAINGDKLQVGHP
NHAWLCLDLLDVLCQIAERGHAASVRLMLDYPLKHCPEVLLLGMSHINTAYNLVQREVSF
TIFPMTFKSTSGTGMIQHLWHVNPNLVLRGVIDSHNNDPDSITRILDICQELEILSPLLE
MIPSFSSIRLAALASRKEYVDLEKWLANNLTTYKDVFFEECLKFLKEIHGGGSFNHSGAV
LNLYVETTTTFLKVLKAHAGLNTSSQLSDELERLQLSIVDSNPRLQNGGATDSSTSDGYS
DDIEAEANSYFQKMFSEQKTIDAMVQMLGRLKESTVQREQAIFGCMIGNLFEEYRFFPKY
PERQLRIAAVLFGSVIKHQLVTHLTLGIALRGVLDALRKPADSKMFLFGTLALEQFVDRL
IEWPQYCNHILQISHLRSTHLEIVAFIEQALARISLGHSDQDGVNHASVTNNHSSAQGAS
GNVEFYSSSGIQLGQQLSSLQLQQRHETPLDDRHKASSGSSHDMKPLISSVGQSSVVPPG
DNSSSQRLQNTISAPAMLSSSPGFVRPTRGPTSTRFGSALNIETLVAAAEKRETPIEAPA
SEVQDKISFIINNISVTNIEAKSKELAEILKEQFYPWFAQYMVMKRASIEPNFHDLYLKF
LDKVNSKALNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRA
REIDPKSLIMEAYEKGLMIAVIPFTSKILEPCQSSIAYQPPNPWTMGILGLLAEIYSMPN
LKMNLKFDIEVLFKNLGVDTKDVTPTSLLKDRKREIEGNPDFSNKDVGASQAQMMNDIKS
GLVPPVNQVELPLEVSNSSNTGGHTHLLSQYAAPLHLSTGALMEEEKATALGLSDQLPQG
LLQASPSSSPFSVSQLPTPIPNIGTHVIINQKLTALNLHIHFQRVVPIAMDRAIKEIVSG
IVQRSVSIATQTTKELVLKDYAMESDETRIFNAAHLMVASLAGSLAHVTCKEPLRGSISS
QLRNSLQGLNIANELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEISQQLTLRRK
HREGVGPTFFDANLYPQGSMGVVPEALRPKPGHLSHSQQRVYEDFVRLPWQNQSSQGSYA
MPSGPSVTSSSTGMTGDYGPASGQLTTGYSGHGSTGFEAVSRSLDDAMESNSAPHFSTSS
VHVRLADGVSQHSSESDPVIASFPSPATTPELHSVDSSDAVKDSGLPSPIALERLGSTIT
EPSLTTRDALDKYQIVAQKLESLVNNDTRETEIQGVILEVPEIILRCVSRDEAALAMAQK
VFKGLYDNASNKIHVGAHLAILTAIRDVCKLAVKELTSWVIYSEEERKFNKDITVGLIRS
ELLNLAEYNVHMAKLIDGGRNKAATEFSISLLQTLVLEEPKVISELHNLVDALAKLAAKP
GSPESLLQLVEIVKNPGSNIGVLSGASFGKEDKTRLLRDKKGTGLPTASREEYNNVESLE
PDPAGFREQVSMLFAEWYRICELPGANDAACTHYILQLHQNGLLKGDDMTERFFRILTEV
SVSHCLSSEVINSGSLQSPQMQALSFLAIDIYAKLVFSILKPMQQGSSKLHLLSKILAVT
VRFIQKDAEEKKASFNQRPYFRLFINWLLDLGSLEPVIDGAILQILTVFANAFHNLQPLK
VPAFSFAWLELISHRSFMPKMLTGNGHKGWTYIQRLLINLFQFMEPFLRNAELGVPVHFL
YKGTLRVLLVLLHDFPEFLCDYHFTFCDMIPPSCIQMRNIILSAFPRSMRLPDPSTPNLK
IDLLQEITQSPLILSEVDAALKAKQMKADVDEYLKTRQQGSSFLTDLKQKLLLSPSEAAS
AGTRYNVPLINSLVLYVGMQAIQQLQARSPHAQSTNGFTLAVFSVGAALDIFQTLIMDLD
TEGRYLFLNAVANQLRYPNTHTHYFSFILLYLFAESNQEIIQEQITRVLLERLIVNRPHP
WGLLITFIELIKNPRYNFWNRAFIRCAPEIEKLFESVSRSCGGPKPVDESMVSGWVSDGP
H
NT seq
7206 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccatgacgaagttttcgtcaacagcttcgaatcagattcgtttcctgcttcag
aacttgaacgagcgcaactttgaatccattttccaagagctttgtctgtttctccaattt
ggaactgatggaagcattttgctgctccaaacctgcttggatcacttgaattttttcaac
agagatataaataatatgcatcaggaaccaattcttgcatcaattattaagtatctcttg
gacaagccaaacttcagtacagtgttttcccagtcactaaagatgacggagatcagtgaa
ggctttttacaaaaattttctaatgtattagacttgtctttgtctgagaaaattggtgtc
agtcttgctttgtcagattctgaaaatctcgacaccaagatgattggcaaaaatttttgt
atggctcagattgaggaattgtgtgccaatcccatttccttgagttcctgtgagaaaatt
cagaatgttgtcacgttcctccagcggtctgagggcctttccaagcatgtcgattccttt
atgcagatgttgtcattgatgcaagatacaacaccttttactttaacaccattgctgtct
gatgatatgcgtgaggccaattttctgaggaatttggacttgtgcaatgattctggagag
aatgattttgatactattttagcggatatacaaatggaattgagcattggagatattgtc
aaggaacttggttatggatgcacagttaatgtgtctcaatgcatggaaattttctctctt
ttcttacctttaactgacgttacccttgctaaagtacttggcacaattgctcatacttat
gctggactggaggataatcagaacttctttttgacctttagcatggccattggttgcagc
acattgtctgagttgccaccattgaactcctggaatattgatgtcctcatatatacaatt
agacatcttgcccctggaaccaactggcttcgggttattgaaaatcttgatcatgaagga
ttttatcttccctgtgaagaagcattctcttttcttatgtccgtgtataaacatgcgtgc
caggagtcatttcccctccatgccatttgtgggtctgtctggaagaatgttgagggtcag
ttatccttcctcaagtatgctgtatcagcaccacctgaagtatttagctttgctcactcc
ataaggaagctggactatgttgatgcaatcaatggcgacaagctccaagttggacatcca
aatcatgcatggttatgtcttgacctcttggatgtactgtgtcagatagctgagaggggt
catgctgcttctgttcgattgatgcttgattaccctcttaaacactgcccagaagtctta
cttctggggatgtcacatattaatactgcttataaccttgttcagcgtgaagtgtctttt
actattttcccaatgacatttaaaagtactagtggcactggcatgattcaacacctctgg
catgttaatcctaatcttgtgttgcgtggggttatagattctcacaataatgatccagac
agcattactagaatattggacatctgccaagagctagagattctatccccgttattggag
atgattccatctttttcaagtatcaggttggcagcccttgcttcacgaaaagaatatgtt
gacctagagaaatggttggctaataatttaactacatacaaggatgtcttcttcgaggag
tgtcttaagtttttaaaggagatccatggtggtgggtccttcaatcattctggtgctgtc
ttaaatctctatgtggagacgacaactaccttcttgaaggttcttaaagctcatgctggt
ttgaatacctctagccagttatctgatgaacttgaaaggctccagctttccattgtggat
tctaatccaaggctgcaaaacggtggggctactgattcatcaacatctgatggatattcc
gatgatattgaggcagaagcaaattcctatttccagaaaatgttctctgaacagaaaact
attgatgctatggtgcaaatgctcggtcgattgaaggaatctactgtacaaagggagcag
gcaatttttggttgcatgattgggaatttgtttgaggagtacagattcttcccaaagtat
cctgaaaggcagcttcgaattgctgctgttctctttggctctgttatcaagcaccagctt
gtaactcatctaacactggggattgctcttcgtggtgttctggatgcattacgcaagcct
gctgattcaaagatgtttttgtttggtactttggcactggagcagtttgtggatcgtctt
attgagtggccgcagtattgcaatcacattctgcaaatttcccatctgcgcagtacacat
ttagaaattgttgcttttattgaacaggctcttgccaggatctctttgggtcattcagac
caagatggtgtcaaccatgcctctgtgaccaataatcatagctctgcacagggtgcctcg
ggcaatgtggagttctatagctctagtggcatacaacttggacagcaactttcttcacta
cagcttcagcaaagacatgaaactcctcttgatgaccgtcataaagcttcatctggttcc
tctcatgacatgaaaccactcatatcttctgtaggacaatcttctgtagtcccacctggc
gataattccagctctcagaggcttcagaacacaattagtgccccagcaatgctctcctct
tcccctggttttgttcgtcctaccaggggacctacttctaccaggtttggctctgctttg
aacattgaaacacttgttgctgcggctgaaaaaagagaaactcccattgaggctccagca
tcagaggttcaagacaagatatcttttataataaataatatctctgttactaatattgaa
gccaaatcaaaagagctcgctgagattttgaaagagcagttttatccctggtttgcacag
tatatggtcatgaaaagagcaagtattgagccaaattttcatgacctgtacttgaagttc
ctggacaaagttaattcaaaggctttgaataaagagattgtccaagctacttatgagaat
tgcaaggttcttttaggatcagagctcatcaagtcaagctctgaagagcgttcactcctt
aaaaatctgggtagctggcttgggaagttaacaattgggaggaatcaagtattaagggct
cgggaaatagatccaaaatctttgattatggaggcatatgagaagggattgatgattgcc
gtaattccatttacttcaaagattctggaaccatgccaaagcagtattgcatatcaaccc
ccaaatccctggactatgggcatccttggattgcttgctgagatctactcaatgccaaac
ttaaaaatgaacctcaagtttgacatagaggtcctattcaaaaatcttggtgtggatacg
aaagacgtaacaccgacttctcttctcaaggatcgtaaaagagaaattgaagggaatcct
gatttctctaacaaagatgtaggggcatcccaagcacagatgatgaatgatatcaaatct
ggtttggtacctccagtaaatcaagttgaattgccacttgaggtttccaattcatctaat
acaggaggacatacacatctgctgtctcagtatgctgccccccttcacctttctacgggt
gcattgatggaagaagagaaggctacagcattgggattgtctgatcaacttcctcaagga
ctgttacaagcatctccttcctcttcacccttttctgttagtcagcttccaacaccaata
ccaaatattgggactcatgttattatcaaccagaagctcactgctttgaacttgcatatc
cattttcagagagtggtcccaattgctatggatagagctatcaaagagatagtgtctgga
attgttcagcgcagtgtttctatagcaactcaaacaacaaaagagctcgtgttaaaggat
tatgcaatggagtcggatgagacacgcatatttaatgcagcacatttgatggttgcgagt
ctggcaggaagtctagctcatgttacatgcaaggaaccattacgtgggtcgatatcaagt
caattgaggaattcactccagggtttaaatattgctaatgaacttctggaacaagcagta
cagcttgtgaccaatgataatctggatcttggttgtgccgtcattgaacaggctgcgaca
gataaggcaatacaaactattgatggtgagatatcccaacaacttactttgaggaggaag
catcgagagggtgtcggtcccacattctttgatgcaaacttgtacccacaaggttctatg
ggtgtggtgccggaagcccttcgccctaagccaggccacttgtcccattctcaacagcgt
gtctatgaggattttgttcggcttccttggcaaaatcaatctagccagggctcgtatgcc
atgccttctggtccttctgttacatctagcagtactggaatgactggagattacggtcct
gcatctggacagctcaccacaggttattctggtcatgggagcactggatttgaagctgtt
tctcgatcattggatgatgcaatggagtctaattcagctcctcattttagtacttcctca
gttcacgtgcgattagctgatggtgtatcacagcacagttctgagagtgatcctgttatt
gcctcatttccttcacctgctaccacccctgagttacactcggtggattcttctgatgct
gtcaaggattctggattaccatctccaattgctttggagcgccttggaagtactataaca
gaaccttctctcacaacaagggatgcactggataaataccaaattgttgcgcagaagttg
gaatctttggtaaacaatgatactagggaaacggaaattcagggagttatattggaggtt
cctgaaattatactcagatgtgtgagtcgagatgaggcagcgttggccatggctcaaaag
gttttcaagggattatatgataatgcatcaaacaaaattcatgttggtgcacatctggca
atcctgacggctatccgtgatgtttgcaagcttgctgtgaaggagcttactagttgggta
atttactcagaggaggagcgaaaatttaacaaagatattactgtgggccttattcgaagt
gaattgcttaatcttgctgagtacaatgttcatatggcaaaactaattgatggagggagg
aataaggctgcaacggagttttccatttctcttcttcaaaccttagttcttgaggaacct
aaagttatttcagaactccacaatcttgttgatgcattagcaaagcttgcagcaaagcct
gggtctcctgaatcattattacagctggttgagattgtcaagaatccaggttcaaatatt
ggagttctatctggtgctagttttggaaaggaggacaagactcgattattaagagacaaa
aagggtactggtctccccactgcaagcagggaagagtataacaatgtagagtctttggaa
ccagatcctgctggtttccgtgagcaggtttccatgctgtttgcagagtggtaccgtata
tgtgaactccctggtgctaacgatgcagcttgtacccattacatcttacaattgcatcag
aatgggctacttaagggggatgatatgactgaacgctttttccggattttgacggaagtt
tctgtctcacattgtctgtcttctgaggtgatcaattcaggatcactgcagtctccacaa
atgcaggcactttctttccttgctattgatatatatgcaaaactagtcttttcgatccta
aagcctatgcaacagggatcaagtaaacttcatcttctttccaagatattagcagtgact
gtcagattcattcagaaagatgcagaagagaagaaagcgtctttcaatcaaagaccatat
ttcagattgtttattaattggcttctggaccttggctcccttgagcctgttattgatggt
gcaatccttcagattttgactgtctttgccaatgcatttcataatttgcagccccttaaa
gtacctgcattcagctttgcatggcttgagttgataagtcacagaagcttcatgccaaaa
atgcttactggaaatggacataagggatggacttatatccaacggttgctgatcaacctc
ttccaattcatggagccatttttgaggaatgctgaactaggagttccggtccattttctt
tacaaaggaacgcttagagttctgctagtgctacttcatgatttcccggagttcctctgt
gattatcattttaccttctgtgacatgatccctccaagctgtatacaaatgcgaaatatt
attcttagtgcatttccccgcagtatgaggctgccagatccatctactccaaacttaaag
attgatttactacaagaaatcactcaatccccactcattctctccgaggttgacgcagct
cttaaagcaaagcagatgaaggccgatgtagatgaatatcttaagacaagacaacagggt
tcttcgttcctgactgatttgaagcagaaattgcttctttcacctagtgaagctgcctct
gctgggacccgttacaatgtgccgttgatcaattcgcttgtgctctatgttggcatgcag
gccatccagcaattgcaggcacgatctcctcatgcacaatcaaccaatgggttcacattg
gctgtattctctgttggtgctgcattggatatattccagactttaattatggatttagat
actgaaggacgctacctttttctaaatgctgttgctaaccaactgcgttatcctaacact
catacgcattacttctccttcatccttctgtacctgtttgcggaatcaaatcaggaaatt
attcaagaacaaattacgagagtattgctagagcgccttattgttaaccgacctcatcct
tggggactgctcattactttcatcgagcttatcaagaatcccaggtacaacttctggaat
cgagccttcataagatgtgcaccagagattgaaaaactatttgaatcagtctccagatct
tgtgggggtccaaaacctgtggatgaaagcatggtctccggttgggtttctgatggtcca
cactga
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