Quillaja saponaria (soapbark tree): O6P43_035314
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Entry
O6P43_035314 CDS
T09778
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
O6P43_035314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_035314
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_035314
Enzymes [BR:
qsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
O6P43_035314
Transcription machinery [BR:
qsa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
O6P43_035314
DNA repair and recombination proteins [BR:
qsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
O6P43_035314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_2
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
KAJ7941637
UniProt:
A0AAD7KM29
LinkDB
All DBs
AA seq
766 aa
AA seq
DB search
MLGSGNEGVSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQLFVETYQLV
EPLIKEKDAIYESLTYSSELYVSAGLIWKTGRDIQEQTIFIGNIPLMNSLGTFIVNGIYR
IVINQILQSPGIYYRSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISI
LVLSSAMGSNLKEILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPVFS
ESLCRELQKKFFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGMKFGM
GTLDDMNHLKNKRIRSVADLLQDQFGLALARLENMVRGTICGAIRHKLIPTPQNLVTSTP
LTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR
ICPIDTSEGINVGLIGSLSIHARIGHWGSIESPFYEISERSKRVQMLYLSPSRDEYYMVA
TGNSLALNRGIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN
RALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVPAIAEHEGKIVYTDTDKIIFSGN
GDTLSIPLVMYERSNKNTCMHQKPRVPRGKCIKKGQILADGAATVGGELALGKNVLVAYM
PWEGYNSEDAVLLSERLVYGDIYTSFHIRKYEIQTHVTSHGPERITKEIPHLEAHLLRNL
DKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQ
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcttgggagtggaaatgagggggtgtctacaatacccgggttgaatcagatacaattt
gaagggttttgtaggttcattgatcagggcttaacagaagaactttataagtttccaaaa
attgaagatacagatcaagaaattgaatttcaattatttgtggaaacatatcaattggta
gaacccttgataaaagaaaaagatgctatatatgaatcactcacatattcttctgaatta
tatgtatccgcgggattaatttggaaaaccggcagggatatccaagaacaaacaattttt
attggaaacattcccctaatgaattctctgggaacttttatagtaaacggaatatacaga
attgtaatcaatcaaatattacaaagccccggtatctattaccggtcagaattggaccat
aacggaatttctgtctatactggcaccataatatcagattgggggggaagattagaatta
gagattgatagaaaagcaaggatatgggctcgtgtgagtaggaaacagaaaatatctatt
ctagttctatcatcagctatgggttcgaatctaaaagaaattctagagaatgtttgctac
cctgaaattttcttgtctttcctgaatgataaggagaaaaaaaaaattgggtcaaaagaa
aatgccattttggagttttatcaacaattttcttgtgtaggcggggatccggtattttct
gaatctttatgtagggaattacaaaagaaattctttcaacaaagatgtgaattaggaagg
attggtcgacgaaatatgaaccgaagactgaatcttgatataccccagaacaatacattt
ttgttaccgcgagatatattggcagctgcggatcatttgattggaatgaaatttggaatg
ggtacccttgacgatatgaatcatttgaaaaataaacgtattcgttccgtagcggatctc
ttacaagatcaattcggattggctctggctcgtttagaaaatatggttagaggaactata
tgtggagcaattaggcataaattgataccgactcctcagaatttggtaacttcaactcca
ttaacaaccacttatgaatctttttttggattacacccattatctcaggttttggatcga
actaatccattgacacaaatagttcatgggagaaaattgagttatttgggccctggagga
ttgacagggcggactgctagttttcggatacgggatatccatcctagtcactatggacgt
atttgcccaattgacacgtctgaaggaatcaatgttggacttatcggatccctatcaatt
catgcgaggattggtcattgggggtctatagaaagtccattttatgaaatctctgagaga
tcgaaaagagtacagatgctttatttatcgccaagtagagatgaatactatatggtagcg
acgggaaattctttggcgctgaatcggggtattcaggaggaacaggttgttccagctcga
taccgtcaagaatttctgactattgcatgggaacaggttcatcttcgaagtatttttccc
ttccaatatttttctattggagcttccctcattccttttatcgagcataatgatgcaaat
cgagctttaatgagttctaatatgcaacgtcaagcagttccgctttctcagtccgaaaag
tgcattgttggaaccgggttggaacgccaagtggctctagattcaggggttcccgctata
gccgaacacgagggaaagatcgtttataccgatactgacaagatcattttttcgggcaat
ggggatactctaagcatcccattagttatgtatgaacgttccaacaaaaatacttgtatg
catcaaaaaccccgggttccgcggggtaaatgcattaaaaaaggacaaattttagcggac
ggtgctgctacagttggtggcgaactcgctttgggaaaaaacgtattagtagcttatatg
ccatgggaaggttacaattctgaagatgcggtactccttagtgagcgtctggtatatgga
gatatttatacttcttttcacatacggaaatatgaaattcagactcatgtgacaagccat
ggccccgaaagaatcactaaagaaataccgcatctagaggcccatttactccgaaattta
gacaaaaatggaattgtgatgctgggatcttgggtagagacgggcgatattttagtgggt
aaattaacgcctcaaatggcgaaagaatcatcgtatgccccggaagatagattattaaga
gctatacttggcattcag
DBGET
integrated database retrieval system
