Quercus suber (cork oak): 136066733
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Entry
136066733 CDS
T05868
Name
(RefSeq) exosome complex exonuclease RRP46 homolog
KO
K12590
exosome complex component RRP46
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136066733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
136066733
Messenger RNA biogenesis [BR:
qsu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
136066733
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
136066733
NCBI-ProteinID:
XP_065627562
LinkDB
All DBs
Position
Unknown
AA seq
127 aa
AA seq
DB search
MEIDRLDGRKANQLRPLACSRNILNRAHGSASWTQGDTKVLVAVYGPKAGTKKNENPEKA
CIEVIWKPKSGQIGKLEREYEMIVKRTLQSICILNINPNTTTSVIVQVIVLVQVDNFSVF
IFDVMLL
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagatagattagatggccgtaaagcaaaccagttgagaccccttgcttgttcc
cgcaatatcctcaaccgtgctcatggctctgccagttggactcaaggggataccaaagtt
cttgttgcagtgtatggaccaaaagccggaacgaagaagaatgaaaaccctgagaaggct
tgcattgaagttatttggaagcctaagtcagggcagattggaaaattggaaagggagtat
gagatgatagtgaagaggaccttgcaaagcatttgcattttgaatatcaatccaaatacc
acaacatcagttatagttcaggtaatagttttggttcaagtggacaatttttctgtcttt
atctttgatgttatgttgctttag
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